LOCUS       XM_039087951            1363 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation initiation
            factor 2B subunit epsilon (Eif2b5), transcript variant X1, mRNA.
ACCESSION   XM_039087951
VERSION     XM_039087951.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087951.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1363
                     /gene="Eif2b5"
                     /note="eukaryotic translation initiation factor 2B subunit
                     epsilon; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 ESTs, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     103 samples with support for all annotated introns"
                     /db_xref="GeneID:192234"
                     /db_xref="RGD:708380"
     CDS             86..1279
                     /gene="Eif2b5"
                     /codon_start=1
                     /product="translation initiation factor eIF-2B subunit
                     epsilon isoform X1"
                     /protein_id="XP_038943879.1"
                     /db_xref="GeneID:192234"
                     /db_xref="RGD:708380"
                     /translation="MAATAAVPSAVGGRANKRGGGSGGGGTQGAEEEPPPPLQAVLVA
                     DSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLQ
                     KSKWCHPTSLNVVRIITSDLYRSLGDVLRDVDAKALVRSDFLLIYGDVVSNINISKAL
                     EEHRLRRKLEKNVSVMTMVFKESSPSHPTRCHEDNVVLAVDSTTNRILHFQKTQGLRH
                     FSFPLGLFQGSLDGVEIRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEE
                     ILGNQIHLHVTSREYGARVSNLHMYSAVCADVIRRWVYPLTPEVNFTDSSTQSYTHSR
                     HNIYRGPEVSLGHGSVLEENVLLGAGTVVGSNCSITNSVIGPNCHIGLCFGCGALSDR
                     KPSSF"
ORIGIN      
        1 accttcgcgt tttgactgcg agtccttttt gtcccctact gcgtgcggtg tggcttcccg
       61 gcggacgtgc tgactgcgaa gcaaaatggc agccactgcg gcggttccca gcgctgtagg
      121 cggccgagcg aacaaacgcg gcggcggctc cggcggcggt ggaacccaag gtgcggagga
      181 ggagccgccg ccgcccctcc aggcagtttt agtggccgat agcttcgacc gccgcttctt
      241 ccccatctcc aaggaccagc ctcgggtcct attgcccctg gccaatgtcg cgctgatcga
      301 ctatactctg gaattcttga ctgccacggg tgtacaggaa acatttgtct tttgctgctg
      361 gaaggctgct cagatcaaag aacacttaca gaaatccaaa tggtgccatc ctacgtccct
      421 caatgttgtt cgaataatca catcagacct gtaccgatca ctaggagatg tcctccgtga
      481 tgtcgatgcc aaggccttgg tgcgctctga tttcctcctg atatatggag atgtcgtctc
      541 aaatatcaat atttccaaag ccctggagga acacaggtta agaaggaagc tagaaaaaaa
      601 tgtgtctgtc atgacaatgg tgttcaaaga gtcctcaccc agtcacccta cacgctgcca
      661 tgaggacaat gtggtgctag ctgtggatag caccacaaac aggattcttc acttccagaa
      721 gacccaaggc ctccgccatt tctcctttcc tttgggccta ttccagggca gtctagacgg
      781 agtggagatt cgatatgact tgttggattg tcacatcagc atctgctctc ctcaggtagc
      841 tcagctcttc acagacaact ttgactacca aactcgagat gattttgtgc gaggcctgct
      901 agtgaatgag gagatcctag gaaatcagat tcacttgcat gtgacaagta gggaatatgg
      961 tgcccgggtc tccaacctac acatgtactc agctgtctgt gctgacgtca tccgccgatg
     1021 ggtctaccct cttactccag aagtcaactt cactgacagc agtacacaaa gctacactca
     1081 ttcccgacac aacatctacc gagggcctga agtcagcctg ggccacggca gcgtcctgga
     1141 ggaaaacgtg cttctgggag ctggcactgt cgttggcagc aactgctcca tcaccaacag
     1201 tgtcattggc cctaactgcc acattggact ctgtttcgga tgtggagccc tgagtgaccg
     1261 gaagccctcc tcattctgag ccaggtgata atgtggtact ggaccaggcc tacctgtggc
     1321 agggagttcg agtggctgct ggagcacaaa tacaccagtc tct
//
