LOCUS       NM_001008305            2577 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus eukaryotic translation initiation factor 1A
            domain containing (Eif1ad), mRNA.
ACCESSION   NM_001008305 XM_215156
VERSION     NM_001008305.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Andreev,D.E., O'Connor,P.B., Zhdanov,A.V., Dmitriev,R.I.,
            Shatsky,I.N., Papkovsky,D.B. and Baranov,P.V.
  TITLE     Oxygen and glucose deprivation induces widespread alterations in
            mRNA translation within 20 minutes
  JOURNAL   Genome Biol 16 (1), 90 (2015)
   PUBMED   25943107
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085818.1.
            
            On Dec 16, 2004 this sequence version replaced XM_215156.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085818.1, SRR8487227.115974.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2577
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /note="eukaryotic translation initiation factor 1A domain
                     containing"
                     /db_xref="GeneID:293673"
                     /db_xref="RGD:1304686"
     exon            1..405
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
     exon            406..624
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
     CDS             538..1041
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /note="eukaryotic translation initiation factor 1A
                     domain-containing protein"
                     /codon_start=1
                     /product="probable RNA-binding protein EIF1AD"
                     /protein_id="NP_001008306.1"
                     /db_xref="GeneID:293673"
                     /db_xref="RGD:1304686"
                     /translation="MSQASKRKHVVQEVLGEHMVPSDQQQIVKVLRTPGNNLHEVETA
                     QGQRFLVSMPSKYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKNHVRSLQKEGHW
                     PEAFSEVAEKQNNVNRESQPELPAEPQLSGEGSGSEDDSDLFVNTNHRQYHESEEESE
                     EEEEEAA"
     exon            625..733
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
     exon            734..842
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
     exon            843..890
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
     exon            891..2553
                     /gene="Eif1ad"
                     /gene_synonym="RGD1304686"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggattttgtt tctccggcgg cccttcccgt ctgtgggatt gacgcttccg aggagaatac
       61 tttttcctgt ctagcacctg gaacttgggt ttgtctgact tgatggaggg aagagttaaa
      121 ggaacggaca aagagggggc ggggcatccg gagggcctct gagaaccccg gaagtgcaat
      181 tcacggcgcg gtttcctcag agtcaggttt atcacctcaa acctgcagac ggaaggtagg
      241 aacaccggag gtttgagacc gagcgtccaa accggcgcta ccgtcgtcac cacctgcaag
      301 tcgcatttct ttgctttttg ttgactcact cttgaggtga gtcgtggacg agctgctttc
      361 accgtcaacc tggaaaacgg agcttgcttg tgtagcgccg agcggggcaa ggtggcactt
      421 tttcgtataa ggctgcttct cttgaaagca gtcctggctt ctaagactgg catccaaata
      481 attctggaag aagagctgac agtccgtgca ccctaacaac cctggacaat aaccagcatg
      541 tctcaggcca gcaagaggaa gcatgtggtg caggaagtgc tgggggagca catggtgcct
      601 tctgaccaac agcagatagt gaaagtcctc aggactcctg ggaacaatct gcatgaagta
      661 gagacagcac aagggcagcg cttcctggtg agcatgccct ccaaataccg caagaacatc
      721 tggatcaaga gaggggactt cctcattgtt gaccctattg aagaaggaga aaaagtgaag
      781 gctgagatct cttttgtgct ctgcaagaac catgtccgct ctctacagaa ggagggtcac
      841 tggcctgagg ccttttctga ggtagctgag aaacaaaaca atgtgaacag agagagtcag
      901 ccggaactcc ccgctgagcc acagctgtca ggagaagggt caggttctga agatgattct
      961 gacctctttg tcaacaccaa tcacagacag tatcatgaga gtgaggagga gagtgaagaa
     1021 gaagaggagg aggcggcctg agccccagga cccacttctc tacttgctca gggactaccc
     1081 cttggctttt ctgggtttgg acattcccag ggtgccctgc agatcttttc ctttggatgg
     1141 ggacaaagca tggccccttt ctgaactgac ataaaaagaa ttaaacccct ggtgggtagt
     1201 gacttacact ggtgtccgtg tggctctctg tagagggaag ctcatggtga aatgaagtct
     1261 cttctatggt ggaagccttg gtcacgtgtg ggtagaatgg gcaggaaatg atttgtctga
     1321 actctgctgc atttatctgg ttcacagtac ctctctggac acttgatacc tcaccctgtg
     1381 ctgtgcctta ctgggtcttc ctttatacct gcttatattc agcagctatt ccaatagtta
     1441 agcgtgcagt ctaggacctc ggacccactt gcctcttaag cacagctcag gacaaactcc
     1501 tggtgccttg ttatccctta ctgcaatagt gcttactgcc tgccgctatg caaacaagcc
     1561 tgcatcccat ctctcttcac cttcgtcacc tgtcattccc agaacgtgtc tgtggtcagg
     1621 atacctcctt accatctcct gattttcttt gactttctct aatttcttca gggtattaat
     1681 ttcctgtaat cttttttttt ttgaagctgg ggaccgaacc cagggccttg tgcttgcaag
     1741 gcaagcgctc taccactgag ctaaatcccc aaccccaatt tcctgtaatc ttgaggttgt
     1801 ctctaaccca ggtttgcttc aaaatcactg tgtagcctag gctaaccaac tcagtggctg
     1861 tcctgcctca caggcatgaa cctgtggggc tactaacctt ttgttagagg ctattgtaat
     1921 gtctttaccc cttgtacctc agcatcaaaa gacttcttgt ggtgactcag acctttgctc
     1981 atgactacct ctgtccattt acttactccc attgttttag ttcaaatatc cttcagtagc
     2041 ccaggtactc actaaactgt gcaagcttct gtgaactgtg gcctcactta ttgggaggct
     2101 tctgcttctg gctataccct gctagcatta atcctgcccc tgctaaatcc tattgaaact
     2161 gacctctcag cttagtcttg cccctactgg tcattcatcc ctcagtggaa ctattcaacc
     2221 ctgttgcgta ctcctaatgt gcttgtgtgt atgtattttc gttgaaaact tgtactaatg
     2281 gaacttctac tttggagcct tccttttgtc ttctgacgaa ttttgttttt ttggaggggg
     2341 gctgttgtgg gtagttggtt gagcttggag gcatgcatta gcttcataga atctcatttc
     2401 tgagcaggaa atcctgcaat cacaccctct ctgactctca tttatgttcg tcatgtttgc
     2461 cttttgtggt agtaaatgta tacttgggta tacacatgta taaaatatag gtgtatatac
     2521 atggagaaat aaaccatatg ggttaaagag aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
