LOCUS       XM_006234641            4375 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ets homologous factor (Ehf),
            transcript variant X1, mRNA.
ACCESSION   XM_006234641
VERSION     XM_006234641.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234641.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234641.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4375
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4375
                     /gene="Ehf"
                     /note="ets homologous factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     ESTs, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 11 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:295965"
                     /db_xref="RGD:1310282"
     CDS             188..1087
                     /gene="Ehf"
                     /codon_start=1
                     /product="ETS homologous factor isoform X1"
                     /protein_id="XP_006234703.1"
                     /db_xref="GeneID:295965"
                     /db_xref="RGD:1310282"
                     /translation="MILEGSGVMNLNPANNLLHQPPAWTDSYSACNVSSGFFGGQWHE
                     IHPQYWTKYQVWEWLQHLLDTNQLDASCIPFQEFDISGEHLCSMSLQEFTRAAGSAGQ
                     LLYSNLQHLKWNGQCSSDLFQSAHNVIVKTEQTDPSIMNTWKEENYLYDPSYGSTVDL
                     LDSKTFCRAQISMTTSSHLPVESPDMKKEQDHPVKSHTKKHNPRGTHLWEFIRDILLS
                     PDKNPGLIKWEDRSEGIFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILE
                     RVDGRRLVYKFGKNARGWRENEN"
ORIGIN      
        1 gcttaacatc ctacaaaatg attttaaatt attgtcatat gcatttatct tcactctgat
       61 gagagctcag acgtgataag gccgtggttc cccatcccgg taggagctgg tgtgatagcc
      121 tcctgccttc ttctccatcg tcagagccat agaactttcc accccgaatc tttaggtaaa
      181 tgagatcatg attctggaag gaagtggtgt aatgaatctc aacccggcca acaacctcct
      241 tcaccagccg ccagcctgga cggacagcta ctccgcatgc aacgtttcca gtggtttttt
      301 tggaggccag tggcatgaaa tccaccctca gtactggacc aaataccagg tgtgggaatg
      361 gctgcagcac ctcctggata ccaaccagct ggatgccagc tgcatccctt ttcaggagtt
      421 cgacatcagc ggagaacacc tgtgtagcat gagtctgcag gagttcacga gggcagcagg
      481 ctcagctggg cagctgctat acagcaacct acagcatctt aagtggaacg gccaatgcag
      541 cagtgacctt ttccagtctg cacacaatgt cattgtcaag actgaacaaa ctgatccttc
      601 catcatgaac acatggaaag aagaaaacta tctctacgat cccagctatg gtagcacagt
      661 agatctgttg gacagtaaaa ccttctgccg ggctcagatc tccatgacaa cctccagtca
      721 ccttccagtt gagtcacctg atatgaaaaa ggaacaagac caccctgtaa agtcccacac
      781 caaaaagcac aatccaagag gcactcactt atgggagttc atccgagaca ttctcctgag
      841 cccagacaag aacccagggc tgatcaaatg ggaagaccgt tcagaaggca tcttcaggtt
      901 cctgaagtca gaagctgtgg ctcagctgtg ggggaaaaag aagaataata gtagtatgac
      961 gtatgagaag ctcagccggg ccatgagata ttactacaaa cgagaaatcc tagaacgtgt
     1021 ggacggacga cggctggtct ataagtttgg gaagaacgct cgtggatgga gagaaaatga
     1081 gaactgatgc tgccaaccct tgggatacaa accaaaacac agcaaaatgg attatgatca
     1141 atgaagaact ggacgtaaat atttcaaaga ctacttttct gtgatattta tgtaccatga
     1201 agggacaaag aaaatatact tctgacggga agaaggaaca ctacagttga taaaaaaaat
     1261 attttgttac tttgaagtat gtcctatgtg gggaagaaat gtacacagtt ttctgtgaac
     1321 tatgacactg tatgtggttg tgatttgctg ttgcctcttt gtgatgttct tttctaccct
     1381 gagaacaaca gggcctatag ccttgtgctt cttgctaaga ggaagggaca ggaaatgaag
     1441 gcattaaatg ttttgaaatg taaaatgatt tagggggaaa aaaggcaatg tgttctctgc
     1501 acataagcct ccatgtgacc tcctcaagag aaatgagatt ggataggtag gacgaagtcc
     1561 agggtctcag agggatggga acaacctaag agatgctgga cagtttaact tgaattagga
     1621 gatagtgagg agagagtggg aactttgaca atccagagtg gccgataatc atggcatgat
     1681 cccaggactg ggaatgttta aataactgag aatgtcggtg ggaggagagt ttaccctcat
     1741 tcatggacaa tgttcatgta acctcttgac ccttgagtgg ttggttaaaa aaatcagttc
     1801 accacctgtg gtcacttcta gctatttaga gttcagccca aatattgaaa aataagtgag
     1861 acaggaagat ggtggcctgg aaatgaccga tgaacatgct cttatagctc tgtagttcaa
     1921 ggtttctcca tgggtacagt tgacatttgg ggctgggtca ttctttgtgc tgagggttgt
     1981 aggggggcat tgtaaaatgt gtagtgatat ccatgacctc cattagcatt ttgtaactat
     2041 gacagtccaa agtatttcca gatactgtca aatgtctcta gaaggacaaa agtacccttg
     2101 agcaagaacc acgaattgaa ccagttgata taaaggtatt cagtctcaga acagagagac
     2161 ctgcagcagc ttctaatccc tagaataaaa caaaagcaag accttgaagt caatatattg
     2221 ttatttttta aaatagtagg gacagtagga tgagatagac tggggagatt ctttttagag
     2281 ctccatgtga gagccaaagt cagataaatg cagtgatata tgtgaagtgc aagacaagat
     2341 gtttacaccg agaatgcagt tattacataa ggaaatgcca agagacgaat ctatggatgt
     2401 ctctctatga tgtgcctctg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     2461 tgtgtgtgtg tgaagttact agaggtctct gtcagttttc tctctgcttt tctttccctg
     2521 gctttggtct aggatggcca gatctttttc tgagttcagt ttctcttatt cctgtaactg
     2581 gatttaactc tacttcatca tggagatatt cttgtcagag agtgggtaaa tctggagagg
     2641 accggtggga acagttctac agataaatag attatgctgt ttgctgagag tggcagtttc
     2701 ttggcaccca gttcccatgt aaataggctg gagtattaag ttctctgcat atctattgtc
     2761 ttggcttgaa tttgctgtgt tctctgtgtg ctatccatga ctttgagaac tccagataat
     2821 ccagctatgc caatttgggg tgtagcagtg tgcttcccac cacagtttga aagaaacatg
     2881 aaagtcctac agagaagccc ctctttcttt agggggatgg ttacctaatt aataagttca
     2941 tctgtgacta atcggccaca agatcactaa aaacaatctc cttgaatttt cctaagtgtt
     3001 gtattagtgg tttccatggg aactgaagtc aagtaatgga ccattaatat ttcacaagac
     3061 tcagattgtc tgaggctcct atacgacttg atgaaattaa acaaggccct ggatctcagg
     3121 aatagatcca cagtttcttc agtatgctaa gcagggcaga ccctgcccat gagtttcatc
     3181 tactgagcct tccttcaagt tcccagctga ttagactgta agctctccaa gggcagggac
     3241 catggctggt cacctttgtt atcctcatac ctgggatgca tcaggataac tattcattga
     3301 ataggtgatg actgtcttct gggagactcc tctgactggg aagccatcag tcatattcgt
     3361 aactgggatg tgaatcacgt ctccagaaca gagcataata accaaacctc ccaggacata
     3421 tcctctcagg cgaacatttt actgtgacac tccttttcct cctacctgtg cagaaaagaa
     3481 attcaaacag cctgcttgtt ccacacgtcg gtgtcttgct ggataagaat tctgttgctt
     3541 tctagaactg tgagacttaa actggttaca agatgccagt agtgaaccct tgacctattt
     3601 aatcaatgca gattataaat gtgtttatat gatgtcaatt gctatttaag caggaaccca
     3661 ttttcagttt tagtatttag gggggtggtt tttatttttt tgttatcttt ttttcctttt
     3721 tgaaaaatgc tgggggctat tttgataagg ttagtcatgc atgttagagt ttcattttgc
     3781 aagtatgtct tgtctttttt aatgtgtaaa aatataagaa aagggaaaac agtaagaagg
     3841 ggaagcaatt acattatttt tcggtagttt attaaggcac ctaatgggtg ccttatgcat
     3901 agtggaacac catttgtgtg agaagtatat gtgagaatat agactgtaaa agtcacatga
     3961 tctagacctg cagaggaaca ctgactaaga gaaggagaca ccagcatggc aaactttgtg
     4021 tcacaggtga gttattttca gttgggggct cagattcagt ttctggaata agggagacca
     4081 ttaagaaaac caaacttctg gaactgtatc tcacaaagtt ttgagacatg tagatttcag
     4141 agtttagccg aattggaact aatcattctg tagctatcta tataaacctc attcttcttg
     4201 ccatctggct tatgggttga taattggtgg gcaacaaccc tactgctact gtttaaaaaa
     4261 aatcgtaacc ctttcccctt aaggtgttaa attcaaacga tttttgttta atgaaagaat
     4321 tctattttgt tcgtttgatg gtcccagaaa acactaataa agaccacaga ggcca
//
