LOCUS       XM_006251568            4886 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EH domain binding protein 1 (Ehbp1),
            transcript variant X7, mRNA.
ACCESSION   XM_006251568
VERSION     XM_006251568.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006251568.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006251568.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4886
                     /gene="Ehbp1"
                     /gene_synonym="RGD1310604"
                     /note="EH domain binding protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 21 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305556"
                     /db_xref="RGD:1310604"
     CDS             564..3953
                     /gene="Ehbp1"
                     /gene_synonym="RGD1310604"
                     /codon_start=1
                     /product="EH domain-binding protein 1 isoform X5"
                     /protein_id="XP_006251630.1"
                     /db_xref="GeneID:305556"
                     /db_xref="RGD:1310604"
                     /translation="MASVWKRLQRVGKHASKFQFVASYQELMVECTKKWQPDKLVVVW
                     TRRSRRKSSKAHSWQPGIKNPYRGVVVWPVPENIEITVTLFKDPHAEEFEDKEWTFVI
                     ENESPSGRRKALATSNINMKQYASPMPTQTDVKLKLKPLSKKVVSATLQFSLSCIFLR
                     EGKATDEDMQSLASLMSMKQADIGNLDDFEEDNEDDDENRVNQEEKAAKITGVQTPQH
                     LNPLDEPETFVMIKDSPPQSTRRRNPRPVDMSKYLYADSSKSEEELDESNPFYEPKPT
                     SPNNLVNTVQEGETERRVKRRAPAPPVPPAPPALPALAPKTNESTVVSAGKDLSTSPK
                     PSPIPSPVLGQKPNASQSLLAWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPD
                     LIDYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAH
                     FSGQELNVVQIEENSSKSTYKVGNYETDTNSSVDQEKFYAELSDLKPASQQPASGAVD
                     LLSQDDSVFVTDSGVGESESERQTPDDHLSPSTASPYCRRTKSDTEPQKSQQSSGRTS
                     GSDDPGLSSSTDSAQALILLGKKRLPKAEDLELRDLYVSGKKKDVSLPSTYEQKLQPV
                     NPRSDVEQEKIENSRSLECRLDGELAIQKPRLSPPSKLGYSYNRDTDFTNKPCASLRQ
                     IESDPDADKSTLNHADHASKPVQHRMLSRQEELKERARVLLEQARRDAAFKAGSKHGG
                     STAPALCSRQLNDRQDEERRRQLRERARQLIAEARCGVKMSELPSYGEMAAEKLKERS
                     KASGDENDNIEIDTNEESPEGFVVGGGDELTNIESDLDTPEQNSKLVDLRLKKLLDAQ
                     PQVANSLSSAAQKAATDTSEQGEKNGMEDLRTERLQKATERFRNPVVFNKDSTVRKTQ
                     LQSFSQYVENRPEMKRQRSIQEDTERGDEEKAMITEAQRKPSEDEVLNKGFKDTSQYV
                     VGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRR
                     MNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVDKRD
                     ALVRDLDAQEKQAEEEDEHLERTLEQNKGKMAKKEEKCTLQ"
ORIGIN      
        1 gccgcggctc tggcagggct tgctagggcg ggcgggcgat cgcagggcgc tccgccgggg
       61 agggggcgct gcgccgggag ggggcgggcg tcgtcccccc gggaagctgc agaccccggc
      121 tcccgcaaag gagcgccgcg ccgggcttcg ctgttccacg cggctccagc ggggatggag
      181 gactcggtgg cggcggctgc ttctgaggcg gcggcgaccg aagagctgct ctaaggaggg
      241 gacagcggga ttagagttct ccagaatcca cgtcatatat atagcccctg aggtggaatg
      301 gtgatgtctc catgagggaa cctcctctca gtcatcctgt cctgtacatc aactgttctt
      361 gactgggccg ttcatctaag ataggattga ccctgtgaaa cagggagaag acctatggac
      421 tccaagcgtc atctcaagtt atagtttttt ttgttgaaag cacagacata catgcagagc
      481 gcttgtgctt tggaccctct gctgtattag agctgctgtg ctgcttctgc tccagagctg
      541 ttccagtcta ctgacctatc accatggctt cagtttggaa gcgactgcag cgtgtgggaa
      601 aacacgcatc caagttccag ttcgtggcct cctaccagga gctgatggtt gaatgtacga
      661 agaaatggca accagataaa ctggtggttg tttggacaag aagaagccga aggaagtctt
      721 ccaaggcaca cagctggcaa cctggaataa aaaatccata tcgtggtgtt gttgtttggc
      781 ctgttcctga aaacatcgaa atcacggtga ctctgttcaa ggatcctcat gcagaagaat
      841 ttgaagacaa agagtggaca tttgtcattg agaatgaatc cccttctggt cggaggaaag
      901 ctcttgccac cagcaacatt aatatgaagc agtatgcaag ccccatgcca acccagaccg
      961 acgtcaagtt aaagctgaag ccgctgtcta agaaagtcgt gtctgccacc ctccagttct
     1021 ctttgtcctg tatcttcctt cgggaaggaa aagcaacgga tgaagatatg cagagcttgg
     1081 ctagtttgat gagtatgaag caggctgaca ttggcaattt agatgatttc gaagaagata
     1141 atgaggatga cgacgagaac cgagtgaacc aagaggagaa ggcagcaaaa attacaggtg
     1201 tccagactcc acagcacctg aacccccttg atgaaccaga gacgtttgta atgataaagg
     1261 attccccacc gcagtcgaca cgcagaagga acccgagacc ggtggacatg agcaagtacc
     1321 tctatgctga tagttccaag agtgaggagg agctggacga atcaaatcct ttttatgagc
     1381 ctaagccaac ttctccaaat aatttggtca atacagttca agaaggagaa actgaacgga
     1441 gagtgaaaag aagggccccg gcccctccag ttcctccagc cccaccagcc ctgccagccc
     1501 tcgcacccaa gacaaatgaa agcacagttg tctctgcagg gaaagatctc tccacttctc
     1561 cgaagccaag cccgatacca agtcctgttc tggggcaaaa gccaaatgct agtcagtcgc
     1621 tgcttgcctg gtgcaaagaa gtgacaaaaa actaccgggg tgtgaaaatc accaacttta
     1681 ccacatcgtg gaggaatggc ttatcttttt gtgcaatctt acaccacttc agaccagact
     1741 taatcgacta caagtctctg aatcctcaag acatcaaaga aaacaacaaa aaggcttacg
     1801 atggatttgc cagcattgga atttcccgct tactggaacc ttctgacatg gtgttattag
     1861 caatcccgga caaactgacg gttatgactt acctctatca aataagggca cattttagcg
     1921 gtcaagaact gaacgtggtt cagatagaag aaaacagcag taagagcacc tataaagttg
     1981 gcaattatga aacagacacg aacagttctg tggatcaaga gaaattctat gcggagctca
     2041 gcgatctgaa gcctgcatcg cagcagcctg ccagtggggc cgtggacctc ctgtcgcagg
     2101 atgactctgt gtttgttact gacagtgggg tgggagagtc agaaagtgag cgccagaccc
     2161 cagatgacca ccttagtcca agcacggcct ccccttactg ccgcaggact aaaagtgaca
     2221 cggagccgca aaagtcccag cagagctccg ggaggacgtc agggtccgat gaccctgggt
     2281 taagttctag tactgattca gctcaagcac tgattttgtt aggcaagaag agactaccaa
     2341 aagctgagga cttagaatta agggacttat atgtcagtgg caaaaagaag gatgtgtctc
     2401 taccctcaac ctatgagcaa aagcttcagc ctgtaaatcc caggagtgat gtggaacaag
     2461 agaaaataga gaattccaga tctttggaat gcagattgga cggtgaactg gctatccaaa
     2521 agccaaggtt atccccccct tccaaactgg gatattcata taacagagac acagacttca
     2581 caaacaaacc gtgtgcttct ctgaggcaga tagagtctga cccagatgca gacaagagca
     2641 ctttaaatca cgcagaccac gccagtaaac cagtccagca ccgaatgttg tccagacaag
     2701 aggagctgaa agaaagagcg agagttctgc ttgagcaagc aagaagagat gctgctttca
     2761 aggcggggag caagcacggc ggcagcacag cccctgcgct ctgcagcagg cagctaaatg
     2821 atcgccaaga tgaagagagg cgtcggcagc tgagagagag ggctcgtcag ctaatagcag
     2881 aagctcgatg tggagtgaag atgtcagaac ttcccagcta tggtgaaatg gccgcagaga
     2941 agttgaaaga aaggtcaaag gcatctggag atgaaaatga taatattgag atagatacta
     3001 acgaggagag tcctgaaggc tttgtggtag gaggtggaga tgaacttact aatatagaaa
     3061 gtgaccttga cactcccgag caaaatagta agttggtgga cttgaggctg aagaagctct
     3121 tagatgccca gccacaggtg gcaaactcgc tctccagtgc cgcacagaaa gctgcaacgg
     3181 atacctcaga gcaaggagaa aagaatggca tggaagatct ccggaccgaa cgattacaga
     3241 aagcaacaga acgtttcaga aaccctgttg tgttcaacaa ggattccaca gtcagaaaga
     3301 ctcagctcca gtctttcagt cagtatgttg agaacagacc agagatgaaa agacagagat
     3361 caatacagga agatacagag agaggcgatg aggagaaggc aatgataacc gaagctcaga
     3421 ggaagccatc agaagatgaa gtactcaata aagggttcaa agacaccagt cagtatgttg
     3481 tgggggaatt ggcagcactg gagaatgagc agaagcaaat tgacactcgt gccgcgctgg
     3541 tggagaaacg cctccgctat ctcatggaca caggaaggaa cacggaagaa gaggaagcta
     3601 tgatgcagga atggttcatg ctcgtcaata agaaaaatgc cttaataagg aggatgaacc
     3661 agctctccct cctggaaaaa gaacatgact tagaaagaag gtacgagctg ctgaaccggg
     3721 agctgcgggc catgttggcc atagaagact ggcagaagac cgaggcccag aagcgacggg
     3781 aacagctcct gctggatgaa ctagtggccc tggtggacaa gcgagacgcc cttgtcaggg
     3841 acctggacgc ccaggagaag caggctgaag aagaagacga gcatttggag cgaactctgg
     3901 agcaaaacaa aggcaagatg gccaagaagg aggagaagtg cactcttcag tagccttggg
     3961 ccagacttct ccctgcactt cagtcttagg tccccaggcc agaaactgac tggttgattt
     4021 aaaacttttt aacattttgt ttgactggat tgtacttctg gacacccccc ccccatttcc
     4081 tactccagat aatacacaga gctccaaata gctttaaaga ctctttgtga gttaatcatg
     4141 aaatcatttt tgaaaccctg tgaagtagat ttgcacagac accctgtgaa tgattggtaa
     4201 tgaagatgct gtccaaaacg gggagagaaa ggccccttgg tcagctcccc ttctgttttg
     4261 gatgggatga aaatttgaac catgtttgtt gtagtattgt tggtaatagc gaaatgacag
     4321 tgggtggggg gcaaagggga gtaagaaaat gtcacgaatg ttttttccaa tcctgccgta
     4381 tgtaacactg ttacttaaat ctcatagtta gatcctactc tgtgtattga caaagctgtg
     4441 ttccatttgc cagtggggtt tttctgcagt tgtttgcatt aaccataaag ataataaagt
     4501 tcctctctgc tctcctcaga ggatgtccct ttaaggtagc cccagacaaa cctccgggtt
     4561 tgaaagatga actgggagag tggctctaat tgatgtgcag cagtttacaa gacagttcat
     4621 catcagatga tgcgccatct tttaccctga atgattattt attacatctt gcttggttcc
     4681 tactttttgt tggggctcaa cattggctca agaatgctgt taatatttat tctgtattga
     4741 taaaagtctg tcttggtact acaagtaaat atcccattca tcttctctag catagcattg
     4801 tgtgttttgt gaaatggtta tgtttattta ttacaatact gagtcatata aattttcaat
     4861 aaaagcagaa actttcttac cttaaa
//
