LOCUS       NM_001108254            2549 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus EGF-like-domain, multiple 6 (Egfl6), mRNA.
ACCESSION   NM_001108254 XM_001066152 XM_228918
VERSION     NM_001108254.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Manabe,R., Tsutsui,K., Yamada,T., Kimura,M., Nakano,I., Shimono,C.,
            Sanzen,N., Furutani,Y., Fukuda,T., Oguri,Y., Shimamoto,K.,
            Kiyozumi,D., Sato,Y., Sado,Y., Senoo,H., Yamashina,S., Fukuda,S.,
            Kawai,J., Sugiura,N., Kimata,K., Hayashizaki,Y. and Sekiguchi,K.
  TITLE     Transcriptome-based systematic identification of extracellular
            matrix proteins
  JOURNAL   Proc Natl Acad Sci U S A 105 (35), 12849-12854 (2008)
   PUBMED   18757743
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474014.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_228918.4, XM_001066152.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760393, SAMN06680413
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq13"
     gene            1..2549
                     /gene="Egfl6"
                     /note="EGF-like-domain, multiple 6"
                     /db_xref="GeneID:317470"
                     /db_xref="RGD:1563321"
     exon            1..274
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..1757
                     /gene="Egfl6"
                     /note="epidermal growth factor-like protein 6"
                     /codon_start=1
                     /product="epidermal growth factor-like protein 6
                     precursor"
                     /protein_id="NP_001101724.1"
                     /db_xref="GeneID:317470"
                     /db_xref="RGD:1563321"
                     /translation="MQPPWGLALPLLLPWVAGGVGTSPRDYWLPALAHQPGVCHYGTK
                     TACCYGWKRNSKGVCEAVCEPRCKFGECVGPNKCRCFPGYTGKTCSQDVNECAFKPRP
                     CQHRCVNTHGSYKCFCLSGHMLLPDATCSNSRTCARINCQYSCEDTAEGPRCVCPSSG
                     LRLGPNGRVCLDIDECASSKAVCPSNRRCVNTFGSYYCKCHIGFELKYISRRYDCVDI
                     NECTLNTRTCSPHANCLNTQGSFKCKCKQGYRGNGLQCSVIPEHSVKEILTAPGTIKD
                     RIKKLLAHKHTMKKKVKLKNVTPRPTSTRAPKVNLPYSSEEGVSRGRNSGGEQKRKEE
                     RKRKRLEEEKSEKALRNEVEQERPLRGDVFSPKVNEAEDLDLVYIQRKELNSKQEHKD
                     VGYYMAVPALAGHKKNIGRLKLLLPNLTPQSNFCLLFDYRLAGDKVGKLRVFVKNSNN
                     ALAWEETKTEDGKWKTGKVPLYQGIDTTKSVIFEAERGKGKTGEIAVDGVLLVSGLCP
                     DDFLSEEG"
     exon            275..387
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            388..480
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            481..600
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            601..720
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            721..855
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            856..978
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1299
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            1300..1380
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            1381..1646
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
     exon            1647..2549
                     /gene="Egfl6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcgccagggc gcccccagcc actcacagct ccaaacgttc cccagctctc caaccccgct
       61 gtcccctctg cgcccgctgc cacagagcct gccagctgcg cgcaaaacca aggtcctgac
      121 cagcgaagca gagacgaggc ggtggctcct ctgtgtccca cgtcctgagg ggctcaggac
      181 aagaaaggag cccaccccca gccagtatgc agccgccctg gggcctggcg ctccctctgc
      241 tgctcccctg ggtggcaggt ggagtaggga ccagcccacg ggattattgg ttgccagcac
      301 tggcacacca gcctggggtc tgtcactacg gaactaagac ggcctgctgc tatggctgga
      361 aaaggaacag caaaggagta tgtgaagctg tgtgtgagcc cagatgcaag tttggtgagt
      421 gtgtgggacc gaataaatgt agatgctttc caggatacac cgggaagacc tgcagtcaag
      481 acgtgaatga gtgtgcattc aaaccccggc catgccagca cagatgtgtg aatacacacg
      541 gtagctacaa atgcttttgc ctcagcggcc acatgcttct accagacgcc acatgttcaa
      601 actccaggac atgtgccaga ataaactgcc agtacagttg tgaagacaca gcagaagggc
      661 cacgatgtgt gtgtccatcc tctggcctcc gcctgggtcc aaatggaaga gtgtgcctag
      721 atatcgatga atgtgcttct agcaaagcag tctgtccttc caatagaaga tgtgtgaaca
      781 catttggaag ctactactgc aaatgtcaca ttggttttga actgaaatat atcagtcgcc
      841 gatatgattg tgtagatata aatgagtgca ctctgaatac ccgtacgtgc agcccccatg
      901 ccaattgcct caatacccaa ggatccttca agtgcaaatg caagcaggga tacaggggga
      961 atggactgca gtgttctgtg attcctgaac attctgtgaa ggaaatactc acagcacctg
     1021 ggaccatcaa agaccgaatc aagaagttac tggctcacaa gcacaccatg aagaaaaagg
     1081 tgaagcttaa aaacgtcacc ccaagaccca ccagtacacg agcccctaag gtcaacttgc
     1141 cttacagctc tgaggagggt gtttccagag gcagaaactc tggtggggaa cagaaaagga
     1201 aggaagagag aaagagaaag aggcttgaag aagagaaaag tgagaaagcc ctgaggaatg
     1261 aggtggaaca ggagcgaccc ctccgagggg atgtgttctc ccctaaggta aatgaagcag
     1321 aggatttgga tctggtctac atccaaagaa aagagctaaa ttccaaacag gagcacaaag
     1381 atgtgggtta ctatatggca gtccctgcac tggcagggca caagaagaat attggccgat
     1441 tgaaacttct ccttcccaac ttgacacccc aaagcaactt ctgtttgctc tttgattacc
     1501 ggcttgctgg ggacaaagta ggaaaacttc gagtgttcgt gaaaaatagc aacaacgccc
     1561 tggcatggga ggagactaaa actgaggatg gaaagtggaa gacaggaaaa gtccctttgt
     1621 accaaggaat cgacactacc aaaagtgtca tttttgaagc agagcgtggc aaaggcaaaa
     1681 ctggagaaat tgcagtggat ggtgtcttac tggtgtcagg cttgtgtcca gatgactttt
     1741 tatctgagga gggttgaatg tcactgtcct tctttatagc ttcatatgtg gctttttaaa
     1801 tgtcatttct ctgtggtatc tttgtatatc atatcctagg actcttccat tttatagata
     1861 caagctgaca atgtgtaatg ttccaacaga aatactatca taagatgcct tttttttatc
     1921 aaatgcacta agacttgcct tatatatagt accactgtgc cttctcattt gtttctgaat
     1981 ttcccacatt atatcacaaa atggggaaat gccagtccat ctcctcctgc ccagtatgtc
     2041 tgctcttcct acacgagttg gtgaactttt ctatataaca tttgtagaat aacagcaaca
     2101 gaaaaagata agtacagata aatggttaat tgttggggct ggggcaatgg cctagcggtt
     2161 aagtgttcat ttctccagga tcaatttcca gcatccacat ggtgggttgc aaccacctgg
     2221 aactccaatt ccagagaatt caatgccctt ctggcttctg tggacatttt catatgtgtg
     2281 atatacatgc ataaactaca tacacacaca cacaccaatg aagtaaatca tttttttaga
     2341 ttgcttaact tgtaaggtgc ttcttggaaa caatgatatt aaacatagat ttgcgcctat
     2401 gtggctcagc ctgctccttc acagtcaagc ttgcacattt aattttttat aatcatatcc
     2461 aataaaccac cttgtgtcat agtacaataa aagggtatct ttactgactc tgtttacttc
     2521 tgtatataat tctgcatatt ttattcttc
//
