LOCUS       NM_001415037            2744 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus EGF-like and EMI domain containing 1 (Egfem1),
            mRNA.
ACCESSION   NM_001415037 XM_039102235
VERSION     NM_001415037.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000067.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001415037.2.
            
            On Dec 20, 2022 this sequence version replaced XM_039102235.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-377               JACYVU010000067.1  29390923-29391299   c
            378-512             JACYVU010000067.1  29331054-29331188   c
            513-622             JACYVU010000067.1  29328111-29328220   c
            623-727             JACYVU010000067.1  29326452-29326556   c
            728-850             JACYVU010000067.1  28954224-28954346   c
            851-973             JACYVU010000067.1  28888157-28888279   c
            974-1093            JACYVU010000067.1  28829822-28829941   c
            1094-1216           JACYVU010000067.1  28827196-28827318   c
            1217-1354           JACYVU010000067.1  28820995-28821132   c
            1355-1477           JACYVU010000067.1  28815034-28815156   c
            1478-1678           JACYVU010000067.1  28808367-28808567   c
            1679-1852           JACYVU010000067.1  28806342-28806515   c
            1853-1981           JACYVU010000067.1  28794735-28794863   c
            1982-2116           JACYVU010000067.1  28791374-28791508   c
            2117-2744           JACYVU010000067.1  28788858-28789485   c
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q24"
     gene            1..2744
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /note="EGF-like and EMI domain containing 1"
                     /db_xref="GeneID:310269"
                     /db_xref="RGD:1307225"
     exon            1..377
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..2142
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /note="EGF-like and EMI domain-containing protein 1"
                     /codon_start=1
                     /product="EGF-like and EMI domain-containing protein 1
                     precursor"
                     /protein_id="NP_001401966.1"
                     /db_xref="GeneID:310269"
                     /db_xref="RGD:1307225"
                     /translation="MTSWLCFWCVCVWAAASWPPGSALQLQPGMPNVCREEQLTLVRL
                     SRPCTRAFIDTIQFWRQGCSGPRWCMGYERRVRYYIIYRHVYATEHQTVFRCCPGWNQ
                     WDDEPGCFTSVSSLGTHFSGRECWDGDTQQCLCSRGFHGPHCQYDINECAVDNGGCQD
                     QCWNTIGSYYCICQAGQKLEEDGRGCEDVDECALVNGGCQQRCINTPGTFHCDCDTGY
                     RRHADERTCIKTDPCAGANGCAHLCQSENGMARCACHAGYQLSEDKKACEDINECAEE
                     LTTCAHGCVNSKGSFTCTCQPGFELGADGKHCYRIELEIVNICEKNNGGCSHHCKAAI
                     GGPHCSCNHGHQLDTDGKTCIDFDECKSGEACCAQLCINYLGGYECSCEEGFHIDADG
                     CGCDALDDEQLEEEEEEIDILRFPGLLVQSLPQPLPYLDPSLTASYEDEDNDDAVHGA
                     EGEFQGLAALHRVVCLDGTFGLDCSLSCEDCMNGGRCQEGKSGCFCPAGWSGLLCNES
                     DSLRTVEDQQAPMGCLKGFFGKNCKRKCHCANNAHCHRVYGACMCDPGRYGRFCHLRC
                     PRGAYGASCSLECQCVEENTLECNAKNGSCTCKSGYQGNRCQEGVAVAQVF"
     exon            378..512
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            513..622
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            623..727
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            728..850
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            851..973
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            974..1093
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1094..1216
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1217..1354
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1477
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..1678
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1679..1852
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1853..1981
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            1982..2116
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
     exon            2117..2744
                     /gene="Egfem1"
                     /gene_synonym="RGD1307225"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcgccgcc ggcagtgcaa ggctgtgcag ctcttgggct acagtgcccg gggttggttt
       61 ggccggcctc ttctagcacg gccgctgctg cgggtgtctc tagctggggt cgagctgctg
      121 cggtgccctc cgcagcaaga cgcacggcgc ggtcctcaag agcgagcccg gcactagcaa
      181 cttctgcttg gcgagcctaa cttctgcgcg ggggttcgga cttgacgata cccagccgtg
      241 cgcctcgcgc agttggggcg gtggccccgc cggctcaccc tcaccgagat gacctcctgg
      301 ctgtgcttct ggtgcgtctg cgtctgggcc gctgccagct ggccgccagg aagcgcccta
      361 cagctccagc ccggcatgcc aaatgtttgc agagaggagc agctgacctt ggtaagactg
      421 tcacgcccat gcacccgagc tttcatagac accatccagt tctggagaca aggctgctca
      481 ggcccacggt ggtgtatggg atatgaaaga agggttcgct actacatcat ctacagacat
      541 gtgtatgcca cagagcacca gacagtcttc cggtgctgcc ctggttggaa ccaatgggat
      601 gatgaaccag gctgcttcac ctctgtctct tctttgggaa ctcatttcag tggaagggaa
      661 tgctgggatg gagacacaca gcagtgcctt tgttcacgag gatttcatgg accccactgt
      721 caatatgata taaatgaatg tgctgttgac aatggtggct gtcaagacca atgctggaat
      781 acgattggca gttattactg catatgtcaa gctggccaaa aactggagga agatggcaga
      841 ggatgtgaag acgtggatga gtgtgcactc gtgaatggag gctgccagca gcgctgtatt
      901 aacactccgg gcaccttcca ctgtgactgt gacacaggat acagacgcca tgctgacgaa
      961 cgtacctgca taaagacaga cccctgcgca ggtgcaaatg gatgtgctca cctgtgtcaa
     1021 agcgagaatg gcatggccag gtgcgcctgc catgctgggt accagttgtc tgaagacaaa
     1081 aaggcctgcg aagatataaa tgagtgtgct gaggagctca ctacctgtgc tcatggctgt
     1141 gtgaactcaa aggggtcctt cacgtgcacc tgccagcctg gctttgagct aggagctgat
     1201 gggaaacact gttacagaat tgaattagaa attgtcaata tctgtgaaaa gaacaatggc
     1261 ggttgttctc atcactgcaa ggctgcgatt ggtggacccc attgttcctg taaccacgga
     1321 catcagctcg atacagatgg gaaaacatgc atagactttg atgaatgcaa gagcggagaa
     1381 gcctgctgtg cccagctctg tatcaactac ttaggaggct atgagtgcag ctgtgaggaa
     1441 ggctttcaca tcgatgcgga tggttgtgga tgtgacgctt tagacgatga acaattagag
     1501 gaggaagaag aggaaataga catcctgagg tttccaggcc ttctggttca gagcctacct
     1561 cagccactcc cttatctgga tccttctctg actgcttcat atgaagatga agacaatgat
     1621 gatgcagtcc acggagcaga aggagagttc caagggctgg ctgccttgca cagagttgtc
     1681 tgtttagatg gcacctttgg cctggattgc agcttgagct gtgaagattg catgaatgga
     1741 gggagatgcc aagaaggaaa gagtgggtgc ttctgcccag caggatggag tggcctccta
     1801 tgcaatgaaa gcgatagcct aagaactgtg gaagatcagc aagctcctat gggatgccta
     1861 aaaggcttct ttgggaagaa ctgcaaaagg aaatgtcact gtgctaacaa tgcccattgc
     1921 cacagggtat acggtgcctg catgtgtgac ccagggcgct atggaagatt ctgccatctt
     1981 cgttgtccca ggggagccta tggagctagc tgttctttgg aatgtcagtg tgtggaagag
     2041 aacaccctgg aatgcaatgc caaaaatggt agctgcacct gcaaatccgg ttaccaaggc
     2101 aacagatgcc aggaaggtgt agcagtagcc caagtattct gagagccaga cacatcttca
     2161 aaaatcctac ccccaggcct gtgtctgaat cgcacatgaa tagtcaatta agcactgttt
     2221 cagtggcaaa gaactgaagc ctaaacaacc agcagcaacc tcggctcatc gtgatagctt
     2281 ctaaaaccag aagagccact ttcttccagg aacctgtgat gtagggagaa aatccaccta
     2341 aaagctgcct ccatgtcctg gataaaagtt tgtattctgt ggatttggac cccagacaca
     2401 ggcagatctc taagtgtgga ggacccagtg ttctagtaac ccccacctcc accaccataa
     2461 gctcctctta ggaaacctgt gcgaaccctg tactatcgca agaaaaataa attttgattc
     2521 aaatggttcc aaagcaggca agttgaagtt aggaaccaca gcgggtctct cagaacatgg
     2581 cccaactgac tctgagtagt ctagagtcac ttgtgatggg agcacaggac tctaaacctg
     2641 aaagacttgg gaccaacttg tacctttgct gcttacagct ttatgacatc agaaatgccc
     2701 cttcatctct tcaagcctca ctttaataga agataaagtt tgaa
//
