LOCUS       NM_001106033            2529 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus embryonal Fyn-associated substrate (Efs), mRNA.
ACCESSION   NM_001106033 XM_001056024 XM_237944
VERSION     NM_001106033.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Tchernev VT, Mansfield TA, Giot L, Kumar AM, Nandabalan K, Li Y,
            Mishra VS, Detter JC, Rothberg JM, Wallace MR, Southwick FS and
            Kingsmore SF.
  TITLE     The Chediak-Higashi protein interacts with SNARE complex and signal
            transduction proteins
  JOURNAL   Mol Med 8 (1), 56-64 (2002)
   PUBMED   11984006
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Yamabhai M and Kay BK.
  TITLE     Examining the specificity of Src homology 3 domain--ligand
            interactions with alkaline phosphatase fusion proteins
  JOURNAL   Anal Biochem 247 (1), 143-151 (1997)
   PUBMED   9126384
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC161942.1.
            
            On Apr 6, 2008 this sequence version replaced NM_001106033.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161942.1, SRR8487226.94248.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..2529
                     /gene="Efs"
                     /note="embryonal Fyn-associated substrate"
                     /db_xref="GeneID:290212"
                     /db_xref="RGD:1308966"
     exon            1..377
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
     CDS             360..2045
                     /gene="Efs"
                     /codon_start=1
                     /product="embryonal Fyn-associated substrate"
                     /protein_id="NP_001099503.1"
                     /db_xref="GeneID:290212"
                     /db_xref="RGD:1308966"
                     /translation="MAIATSAQLARALYDNTAESPQELSFRRGDVLRVLQREGAGGLD
                     GWCLCSLHGQQGIVPANRVKLLPASPAPKPSLCPAPPTQPGCSSCPTPERGCEEQEVY
                     VIPPPARPCSASGLPARSCSPSSDSIYKVPRVNGIQLTAPRDVGEVYDVPPNILRAPS
                     NCPYDSPASFSCPATPVVPQPPGEDEAPYDVPLALKSPAEMEPDLEWEGGREPGPPLY
                     AAPSNLKRASALLNLYEAPEELLANGESRDADEGIYDVPLLGPEPPSPEPPAASSSAD
                     PDTVAQLLTRSPPPQHRPRLPSTESLSRRPLPALPVSEAPAPSPAPSPAPGRKGSIQD
                     RPLPPPPPCLPGYGGLKPEGDPECREVDSDSGGPHNEYEGIPMAEEYDYVHLKGVDKA
                     QGSRPLDNAFPADPELLERGLVEQKEALSPEEPLVLSTGDLQLLHFYAGQCQSHYSAL
                     QTAVAALMSSTQANQPPCLFVPHGKRVVVAAHRLVFVGDTLGRLAASAPLRAQVGAAG
                     TVLAQTLRATVLAVKGAALGYPSDTAVQEMARCVAELAGQALRFTTLLAGLLP"
     exon            378..659
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
     exon            660..800
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
     exon            801..1520
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
     exon            1521..1610
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
     exon            1611..2488
                     /gene="Efs"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagtgagct ttaccccatg tgtgttcagg aggcctttgc gacttgaggc agcagctgtg
       61 ggggcctgca gccccgaaag accctgggga cagtttagag cgcgcccctt ggatgaggtc
      121 ccgcagcgac gcccaggccc gccctactcc tcctcctgct tggccaagct gcctcctatt
      181 tggaaagttt tgtgggtttt ctttctcttc ctccaacttt gggggaggca tctcctcaag
      241 cgctacagct tggggtgacc ttctggcttg gaggccggga accatggtgt ggggcaccca
      301 tcgctgaggt cagagaaact gagcctagcc tgaagcaggc gaccctggag gccagagcca
      361 tggccattgc cacgtcggcc cagcttgccc gggcactgta cgacaacacg gctgagtccc
      421 cccaggagct gtccttccgc cgaggggatg ttctacgggt actgcagagg gagggcgctg
      481 gtggactcga tggttggtgc ctttgctccc tgcatggcca gcagggtatt gtccctgcta
      541 acagagtgaa gctccttcct gctagcccag cacccaagcc tagcctctgc ccagcacctc
      601 ccacccaacc gggctgctca tcatgcccca ccccagagcg cggctgtgag gagcaggagg
      661 tgtatgtgat accaccacca gctcgaccct gctctgcctc aggacttcca gctagatcct
      721 gttcgccctc ttccgactcc atctacaagg tccccagagt caatgggata cagctgactg
      781 cccccagaga tgtgggagag gtctatgatg tgcctcccaa catcctccgg gctccctcca
      841 attgccccta tgattcccca gcctcctttt cctgtcctgc gaccccagtt gtcccacagc
      901 cccctggaga ggatgaagct ccctatgatg tgcctctggc cctgaagtca cctgcagaga
      961 tggagcctga cctggagtgg gaagggggcc gggagccagg gcctcccctt tacgctgccc
     1021 cttccaacct aaagcgggcc tctgccctgc tcaacctgta cgaagcacct gaagaactac
     1081 tggcaaacgg agaaagccgg gatgcagatg aaggcatcta cgatgtgcct ctgctggggc
     1141 cagagccacc gtcaccagag cccccagcag cttcttcctc cgccgacccg gacactgtgg
     1201 cccagcttct gaccagaagc cctccacccc aacataggcc cagactacca tccactgaga
     1261 gcctgtcccg ccgccctctg cctgccctcc cggtctctga ggctcctgct ccttctccag
     1321 caccttctcc tgccccaggc cgaaagggca gtatccagga caggcctctt ccccctcccc
     1381 cgccctgcct gcccggttat gggggcctca aaccggaggg agatccagag tgcagggagg
     1441 tagacagtga ttcaggaggc cctcacaatg aatatgaagg catcccaatg gccgaggaat
     1501 atgactatgt gcatctgaag ggtgtggata aagctcaggg ttctagaccc ctggataacg
     1561 ctttcccagc ggatcctgaa ctgctggaga ggggactggt ggaacagaag gaagccctgt
     1621 ccccagagga gccactggtc ctgtccactg gagatctaca gcttctgcac ttctatgcgg
     1681 ggcaatgcca gagccactac tcagctctac agactgctgt ggcagctctc atgtccagta
     1741 cccaggccaa ccagccgcca tgtctctttg tgccccacgg caaacgagtg gtggtggctg
     1801 cccaccgcct ggtatttgtt ggggacaccc taggccggct ggcagcctct gcacctctcc
     1861 gagcacaggt gggggctgca ggtacagtgc tggcccaaac cttgcgggcc actgtgcttg
     1921 ctgtcaaggg ggccgcctta ggttacccat ctgacactgc ggtccaagag atggcgcgat
     1981 gtgtggcaga gcttgcaggg caggccctac gcttcaccac cctactcgct ggcctgctcc
     2041 cctgagggcc tgtttgtcca gccttaccct ccctgcctgc cagagccctg cgctccggct
     2101 agaggttcat ctcttggtca ttttagccac ccaccgaggc atctcttccc ccatacctac
     2161 tgctttttgt atgagccatt ttgtataaat tatttatatt taatatttct tgctttgtcc
     2221 aggcaggcag caggccatct ggggtaggga gggactggat tctcctcatc atcctgggtg
     2281 gaggtcgctg tactgccttc tgcctttggg agtttggaac acagaaaatc aggaggctga
     2341 aacttggcac caccacactg agcctctctc ctgtatcttg gctgaagatg acaatgttaa
     2401 gagcctggga aacactggag agcttctccc ctcacaagtc aggaaagcat ggcatgcacc
     2461 tcaataaaac ctgccttatg gttcctgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2521 aaaaaaaaa
//
