LOCUS       NM_001109310            1832 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus EF-hand domain family, member D1 (Efhd1), mRNA.
ACCESSION   NM_001109310 XM_001065159 XM_576608
VERSION     NM_001109310.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Hou T, Jian C, Xu J, Huang AY, Xi J, Hu K, Wei L, Cheng H and Wang
            X.
  TITLE     Identification of EFHD1 as a novel Ca(2+) sensor for mitoflash
            activation
  JOURNAL   Cell Calcium 59 (5), 262-270 (2016)
   PUBMED   26975899
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Tominaga M, Kurihara H, Honda S, Amakawa G, Sakai T and Tomooka Y.
  TITLE     Molecular characterization of mitocalcin, a novel mitochondrial
            Ca2+-binding protein with EF-hand and coiled-coil domains
  JOURNAL   J Neurochem 96 (1), 292-304 (2006)
   PUBMED   16336229
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474004.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001065159.1, XM_576608.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK652925.1, CK602945.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q35"
     gene            1..1832
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /note="EF-hand domain family, member D1"
                     /db_xref="GeneID:501181"
                     /db_xref="RGD:1559565"
     exon            1..393
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..811
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /note="EF hand domain containing 1"
                     /codon_start=1
                     /product="EF-hand domain-containing protein D1"
                     /protein_id="NP_001102780.1"
                     /db_xref="GeneID:501181"
                     /db_xref="RGD:1559565"
                     /translation="MSSEELACKLQRRLRLETRAETHQDSPQAAPCTAPAGHREPEPP
                     APAPTVSADSELNLKLSSRLNIHQGAVRSRRSKVFNPYTEFPEFSRRLLKDLERMFKT
                     YDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIQEVDEDFDGKLSFREFLLIFHKAA
                     AGELQEDSGLLALAKFSEINVALEGVRGAKNFFEAKAQALACSSKFEAELKAEQDERK
                     REEEARRLRQAAFRELKAAFSA"
     exon            394..541
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /inference="alignment:Splign:2.1.0"
     exon            542..676
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /inference="alignment:Splign:2.1.0"
     exon            677..1832
                     /gene="Efhd1"
                     /gene_synonym="RGD1559565"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaagccacg agcccgcaag gagcgcacaa tcctctgcgt cctcgtaccg gatcgcgaac
       61 cccagttcca tcaccaccac cggccaccat gtccagcgag gagctggcct gcaagctgca
      121 gcgccggttg agacttgaga cgcgggcaga aacccaccag gacagccccc aggctgcacc
      181 gtgcactgcc ccagccgggc accgggagcc tgaaccgcct gccccggcgc ccacggtcag
      241 cgcggactcc gagctgaacc tcaagctgag cagcaggctg aacatccacc agggcgcagt
      301 gcggtcccgc cgctccaagg tcttcaaccc ctacacagag ttcccggagt tcagtcgccg
      361 cctcctgaag gatctggaga ggatgttcaa aacgtatgat gctggaaaag atggcttcat
      421 cgacctgatg gagctgaaac tcatgatgga gaaactgggg gcccctcaga cccacctggg
      481 cctgaagaat atgatccagg aggtggatga agacttcgac ggcaagctca gctttcggga
      541 gtttctgctc attttccaca aggctgctgc tggagagctg caggaggaca gtgggctgct
      601 ggcactggcc aagttttctg agatcaatgt cgccctggag ggtgtcagag gtgccaagaa
      661 cttcttcgaa gccaaggccc aggccttggc ctgctccagt aagttcgaag ctgagttaaa
      721 agctgagcaa gatgagcgga aacgggaaga ggaggccagg aggctccgcc aggcagcctt
      781 ccgggagctc aaggcagctt tcagcgcata gtcctgctga cctgaccctt gaccactgct
      841 gtgccttact gacaccctgg aggtgatgac taggattttc acatttttat cctcgcagcc
      901 ttctgcgcaa atgacctccc cttcaaggcc taggcctgtt tcttagtgct tctggataac
      961 cagtgactgc tttcatcctt cccagggtcc tggccccttt caaacggttc gccagctggt
     1021 ttccccagcc ttcactcctc tgccgttatc tgtagccgag atttgtttct tacttgttcc
     1081 cgtgtagtcc tatgtcaaca agtcctgttt atctatggtt ctcagaggac atgttgcacg
     1141 tcatctcgtg tagttttttt tcttgtggtc cttgcattat ttcccagtca gcgtctgtct
     1201 tcttgtcatt actcagattc cactgacttc cttttcaccg tcttccaccc tagtatgatg
     1261 gcgggatttg aaggaagact tgtgaattag accctctatc cccaccccac tccgaaacgg
     1321 gactaacttg atgctgtctt tgcctgtctc ctggcactta acaatgtcta tgttctcgtt
     1381 ccctctcatt cttcatttca caatccagtc attttaagtc ctttactgtt aagaatgaaa
     1441 gaatcgtcag aagtaattaa tattagtgag tagaaggata gctgtcatcc gaccccatgc
     1501 aaatcagggt ggacctgtga aattctcaag tgacatccaa ggtcttttga agtcatggcc
     1561 atcttccggt gtctgacatc agctccaaag aactgaaaga aatgtattct cacccatggg
     1621 acagattttt tttttatctt gtgagtttct tgggacttct cacaaatacc agggggttgt
     1681 attttttaac aaaaacaaaa acaaaaattc ttaatgtcat atttattact tctcttttgt
     1741 aactgctgtc tctacaataa agaaaacatc tgcccttcta tcttacaact gtttactttt
     1801 aaataaaatg agcaaatgat ctttgccttc at
//
