LOCUS       XM_039106682            4377 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EF-hand calcium binding domain 8
            (Efcab8), transcript variant X1, mRNA.
ACCESSION   XM_039106682
VERSION     XM_039106682.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4377
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4377
                     /gene="Efcab8"
                     /note="EF-hand calcium binding domain 8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:499923"
                     /db_xref="RGD:1597364"
     CDS             337..4152
                     /gene="Efcab8"
                     /codon_start=1
                     /product="EF-hand calcium-binding domain-containing
                     protein 8 isoform X1"
                     /protein_id="XP_038962610.1"
                     /db_xref="GeneID:499923"
                     /db_xref="RGD:1597364"
                     /translation="MSSEESGESPQSQKMAQPGGVQEETSKTYPVTSSVSQSSEIHQS
                     TQQFTEMHLADLQKVFEKEADENGALKKEGFIKVMKWVLSNMSEEMLEVLFLKVDSDC
                     NGFVTWQKYVDYMMREFQGKEEMRKSQYRLRFHLPMTVIPLHHGSEVVKVAFLTQGFK
                     KIGCFLTVTKDGILQFWSETFSMMDSFRLTQTKQFGHQQMWVVDVAYLHNMNLIAVAS
                     TELKIEFFDISGYKCIRAFTFIDLDSCAMAMHYWTDYHKAVFCFGDTKGNVVIFISDN
                     VVGGLFNPQILPRTSKWDHWIPVSLRRLLNKKSPLYRSFRMKGLHPNWCQQIKYIPQL
                     NVVVSCSAVEKSSLVLIILPPKDPERPKLSSLSLRKGILCFDYCPDRNFLATGGYDPH
                     IRLWNPLVSKRPVWLMKGHQTSVTHLLVSSKNASILISISRDKTFLPLAYSLQNVRVW
                     DLQDYVCLQSFCGKLFPLGNCPITSAYFHRSSTLICSTYNIGILRGYLESQGPLKTGR
                     ITTHNTPVCTILYSKIFKQVVSGCLQGIVSVWDISTGKKRMELPVSGIQESELTAMSL
                     DESERCLLTGLRDGTVQMWNYNTGECLLTFPNPDKVEISGIVHMNKVYYMTGWSKRIT
                     NFTFQKATQTFSCYHWQSFHTEDILSMDKYQNQFLGTSSYNGDIVFWNVSTMKPILSF
                     NASKSPLPLQPKKVRETETCAPKSPAHLDFEVQKWAHKPWKSTASTVKRRLMSAPPVM
                     KHWKDTEQERNVAQEKHFRSNKPGLSKMLFDKSTHKPPFYKDAQMRKGEFWQKMLLQS
                     SVSVEKIIFLQTRPRLPHTAALLSSCIDGFIYAWSIHGNGGLLGKFSVDPKDTGCVVG
                     AMATDENNWILLTGDSKGNIKIWDIKDYCCFIGQQPFHSSGSSISGDTENKFRLLIPK
                     ELQIYSQHHLLQKEKEVVEGQTISLVPPPLLITWNSHMDSVTDILYVDSFRLVVSASE
                     DRDVKAWKFFGEMIGTFGLGLWNRLQEAAVTDKLEQAESLEKKPDFTGAALKHSFLEL
                     DKELAEALVYQRREQAALMALLHGKAEKETEAWYRLQQMSLLSPWSKDSSMEDIEESW
                     NRWAKDKQASKIVGAAYKPKLRVRNPKLLTSRAQFNWMRQQISPQIYQCLSFTDLKPV
                     QQPDFLMHKILDQEGRHIRWVASDNRSELEFFRGQIFTDITSPATHSSLSTLSVGPSA
                     SNWSTSLKPHSSGSFVRPSSASPVHSSSSTSPQQTSGLLRRGQRPQGQLLSPSCSIRI
                     PGEPPSCPL"
ORIGIN      
        1 ggcttgcagt ggccgccgcg tgcggagcag ttttcctcca gcctcaatcc cagcgccgct
       61 cctacccacg cgcacatttg tccttcctgg acaaggttaa cgcctcgtct cgcacagctg
      121 tgcctcctga gcccctccct tggagacatt gttctctgtg gacccccttg cttctgctct
      181 gcagagcgcc ccctgttcct aaaagggctc taaaccgtat ccagttctta aaagtgttca
      241 cgcttagacg tcaaccactc ctgcagctac tagaatcaaa cattcatcgt caacagtcgg
      301 gttctgccgg cactcccttc ctcaagggca agactaatgt cttctgagga gtcaggagag
      361 agccctcaat cccaaaagat ggcccaacca ggtggagtcc aggaggagac ttctaagacc
      421 tatccagtga caagttccgt cagccagagc agtgaaatcc atcaaagcac tcagcagttt
      481 accgagatgc acctggctga cctacagaag gtgtttgaga aggaggcaga cgagaacgga
      541 gccctgaaaa aggaaggctt catcaaggtc atgaagtggg tactgagtaa catgtcggag
      601 gagatgctcg aggtgctgtt cttgaaggtg gactcagact gcaatggctt tgtcacctgg
      661 cagaagtatg tggattatat gatgcgtgag ttccagggca aggaggagat gaggaagagc
      721 caataccgcc tgcgcttcca ccttcccatg accgtcatcc ccctgcacca tgggagcgag
      781 gttgtgaaag tggcgttttt aacccaaggg ttcaaaaaga taggctgttt cctgactgtc
      841 accaaagatg ggatcctgca gttctggtct gagaccttct caatgatgga ttctttccgg
      901 cttactcaga ccaagcagtt tggccaccag cagatgtggg ttgtcgacgt ggcatatctg
      961 cacaacatga acctcatcgc tgttgcctcg actgagctga agatagagtt ctttgatatc
     1021 agtggctaca aatgcatccg ggccttcacc tttattgatc tagatagctg tgccatggcc
     1081 atgcactatt ggactgacta tcacaaggct gtgttctgct ttggggacac caagggcaat
     1141 gtcgtcatct tcatctcgga caacgtggtt ggtgggctgt tcaacccaca aatcctcccc
     1201 cggacctcca aatgggatca ctggatccct gtctccttga ggaggctctt gaacaagaag
     1261 tcccctctgt atagaagttt ccgaatgaag ggtctccacc ccaactggtg tcagcagatc
     1321 aagtacatcc cgcagttgaa tgtagtggtc tcgtgttcag ccgttgagaa gtcctctctg
     1381 gtgctgataa tactgccgcc caaagatccc gagagaccca agttatcatc actgagttta
     1441 agaaaaggaa ttctttgctt tgactactgt ccggaccgga actttctggc aactggcggc
     1501 tatgaccccc acatccgcct gtggaacccc ctggtctcaa aaaggcccgt gtggctgatg
     1561 aagggacatc agacatcagt gacacacctc cttgtgagca gcaagaacgc cagcatcctg
     1621 atcagcattt ccagggacaa gaccttccta cctcttgcct attccctgca gaacgttcga
     1681 gtgtgggatc tgcaggacta tgtatgcctc cagtctttct gcgggaagct tttccccctg
     1741 ggcaactgcc ccataaccag cgcctacttc cacagaagca gcacgctcat ctgcagcacc
     1801 tacaatattg ggatcctcag agggtacttg gaatcccagg ggcccctgaa aacagggagg
     1861 ataacgactc acaacacacc ggtgtgcacc atcctctaca gcaagatctt caagcaggtg
     1921 gttagcggtt gcctccaggg catcgtgagt gtgtgggaca tcagcacagg caagaagagg
     1981 atggagttac ccgtgtccgg catccaggaa agcgagctga cggccatgtc tctggacgag
     2041 tcggagaggt gtctgctcac aggcttgcgt gacggcacgg tgcagatgtg gaattacaac
     2101 actggggagt gcctgctgac ctttcccaac ccggacaaag tggagattag tggaatagtc
     2161 cacatgaaca aagtgtacta catgaccggg tggagtaaga gaatcaccaa tttcacgttc
     2221 caaaaggcca cacagacatt ctcctgctac cactggcaaa gcttccacac agaggacatc
     2281 ctgagcatgg acaagtatca gaaccagttc cttgggacct cttcctacaa tggggacatt
     2341 gttttctgga atgtcagcac gatgaagcct atcttgagtt tcaatgcctc caagagtccc
     2401 ttgcctttac agccaaagaa ggtgagagaa acggagacat gtgcacccaa atctccagcc
     2461 catctagact ttgaagttca aaagtgggca cacaagccct ggaagtcaac tgcctccact
     2521 gtgaagcgaa gactgatgtc agctccccca gtgatgaaac actggaagga tacagagcaa
     2581 gagaggaatg tggcgcagga gaaacatttc aggagtaaca aacctggatt gtctaaaatg
     2641 ctctttgata agtcgaccca taaaccaccg ttttacaaag acgctcaaat gagaaagggg
     2701 gagttctggc agaagatgct gctgcagtcc agcgtgtcag tggagaagat catttttctg
     2761 cagaccaggc cccgcctgcc gcacacggct gccctgctga gcagctgcat cgatggcttc
     2821 atctacgcct ggtccatcca tgggaacggg ggtctgctgg gaaagttctc tgtggacccc
     2881 aaagacactg ggtgtgtcgt gggtgccatg gccactgatg aaaacaactg gatcctcctc
     2941 accggggaca gtaaaggaaa tatcaagatc tgggacatca aggattactg ctgctttatt
     3001 ggccagcaac cattccactc cagtgggagc tcgatctctg gtgacacgga gaataagttc
     3061 cggctcttga ttcctaaaga actccagatc tactctcagc accacttgct acagaaggag
     3121 aaggaggttg tggaaggaca gaccatttct ctggttcccc caccacttct gattacctgg
     3181 aatagccaca tggacagcgt gacagacatc ctgtatgtgg actccttccg gctagttgtc
     3241 agtgcgagcg aggatcggga cgtcaaggct tggaaattct ttggtgaaat gataggaaca
     3301 tttggcctgg gtctttggaa cagactacag gaggctgcgg tgaccgacaa gctggagcag
     3361 gccgaaagtt tggagaagaa acccgacttc actggtgctg ccctcaagca ctccttccta
     3421 gagctggaca aggaactggc tgaagctctg gtgtaccagc ggcgtgagca agcagcactc
     3481 atggccctcc tgcacgggaa agctgagaaa gaaactgagg catggtacag gctgcagcag
     3541 atgtccctgt tatccccgtg gtccaaagat tcttctatgg aagacattga ggagagctgg
     3601 aatcgatggg ccaaggacaa gcaggcaagc aaaattgtgg gagcagcata taagcccaag
     3661 ttgcgtgttc ggaaccccaa actcctgacc tccagagcgc agtttaactg gatgaggcag
     3721 cagatctctc ctcagatcta ccaatgccta tcctttactg accttaagcc agtccaacag
     3781 cctgacttcc tgatgcataa gatcctggac caagaaggac ggcacattcg ctgggtggcc
     3841 agtgataacc ggagtgagct ggagtttttc cggggtcaga tcttcacaga catcacctca
     3901 cctgccaccc actcttccct ctccactctt tctgtggggc catcggcctc caactggtct
     3961 acctccctga agccccattc atctggttcc ttcgtgaggc cttcatcagc ctctccagtc
     4021 cattctagct cttctacatc accacagcag acctcgggtc tgctccgcag aggtcagaga
     4081 ccccaaggcc aattgttatc tccttcttgc agtatccgaa tcccagggga gccaccctca
     4141 tgtcctctgt gaagtggggc ttccacctca tgtattgagg tgttcgtttt tctctctgtt
     4201 ctgaagcagg ggacctatag ggtcttgcac gtccctggct cactccctgc caggcctgga
     4261 ggatgcagcc ctttcctccc atactgcttc tgtctggata attccagctg tcttgtggct
     4321 ctgcacaatt ctggagaaga aaagaaaata aatattctcc tgcattagag ttctaca
//
