LOCUS       NM_001105977            2604 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus EF-hand calcium binding domain 2 (Efcab2), mRNA.
ACCESSION   NM_001105977 XM_001059936 XM_213950
VERSION     NM_001105977.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473985.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_213950.3, XM_001059936.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW916511.1, SRR8487226.217727.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132265, SAMD00132291
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q25-q26"
     gene            1..2604
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /note="EF-hand calcium binding domain 2"
                     /db_xref="GeneID:289280"
                     /db_xref="RGD:1308593"
     exon            1..256
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
     CDS             226..642
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /note="EF-hand calcium-binding domain-containing protein
                     2; EF-hand calcium-binding domain-containing protein
                     2-like"
                     /codon_start=1
                     /product="dynein regulatory complex protein 8"
                     /protein_id="NP_001099447.1"
                     /db_xref="GeneID:289280"
                     /db_xref="RGD:1308593"
                     /translation="MAEEKDPESTEAIVAELHKKIKEAFEVFDHESNNTVDVEEEEPT
                     GYIRFEKFIPVMTTVLLEKRYRPIAEDVLLRAFEVLDPTKRGFLTKDELVKYMTEEGE
                     PFSQEEMEEMLSAAIDPESNTINYRDYITMMVIDEN"
     exon            257..336
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
     exon            337..416
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
     exon            417..459
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
     exon            460..526
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
     exon            527..2604
                     /gene="Efcab2"
                     /gene_synonym="RGD1308593"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ataaacaaac aaggcaccct acgtccttga cagtcgcaac caggccaagg ccggctcggg
       61 gccttattaa taaatgactc ccctaggccc aaagaacgcc ggcctcagtt cttggggggt
      121 tgggagacgg ccaccgcgcg tcgaggggct tcctccgcct cgtccccctc gcgcggcccg
      181 cagggtttgt gatgggatct cccaggcgac gggctccgca ccaagatggc ggaggaaaag
      241 gacccggaga gtacagaggc aatagtggca gaacttcata agaagatcaa agaggcgttt
      301 gaagtgtttg accatgaatc gaataataca gtagatgtag aggaagaaga acccactggg
      361 tacattcgat ttgaaaaatt tattccagtg atgaccacag tacttctaga aaaaagatac
      421 agaccaattg ctgaagatgt ccttttgcga gctttcgagg ttttggatcc aactaaacgt
      481 gggtttctga ctaaggatga actagtcaag tacatgactg aggaaggcga gcctttttcc
      541 caagaggaaa tggaagaaat gttgtctgct gcaattgatc ctgaatcaaa caccattaat
      601 tacagagact acataacaat gatggtgata gatgaaaatt aaatgctcca aagacttctt
      661 ttttctcctt ttaagacaac tgtaaacatt caatttctaa ttgaaaagat actttgaaaa
      721 attgtcctaa tttttacatt ttatcttaaa atttctatat ttagtgtctc atgatataat
      781 tgtttcaagg tattttgttt actagagatg atcaatttaa aacataaatt ttttagatga
      841 ccagctttat ggacagacaa gttgattatt taaaaggaat tatacagtat tttaatgtta
      901 agtgcatcct tgctcatttt tcccaacgag gccaatgata cattgaaatt aattagacag
      961 aaaatagaga ttgatcctaa ccccccaaga tttgccatag aaagcttttg cagggcagga
     1021 tggccacaga ctagatgtga gtggcagtgt ggtgatggct cctttcagag cagcagtaaa
     1081 cacttcagca ggcagaatat ggagggagag caactggaat aactattaat aattgatttc
     1141 ttatgaatgc caattacaaa tctcatttga gagtctaata acttggggta aaattgaaaa
     1201 ttgctcatcc agcatgttgc catttatgga gtagttgaag gaggtgaggt aattgaatcc
     1261 agagagagga agactgaatg gaaacagaga atggcaactc cttttttgtt ctttacaatt
     1321 ctcacctatt cagaatatct gtcttgggag tattgtcctg ggtactgagt gtattcatct
     1381 gttgttaccg gaatgtagta tctgaaaggc actgactccc aaagaaagca gttcaattag
     1441 ctcccagtta tagatggtca aggtccaggc agcattgtgc aggctgagcg agggccaccc
     1501 ttgcatgcac ctcaccaagg tgcagctaga cagacagaag cacgtggtgg tgcaagcaag
     1561 agcagggagg ctgggaggga gggccaggcc tgctcctttt acaatggtcc tctcataaga
     1621 attacttttc aggctaggga gatggctcaa gggataacgt atttgctgag tgtcattaga
     1681 taacgtgctg gaagctggag atgagagatg gataagcttc taattaatca aggtcacagt
     1741 ttactgaggg aggcttgcaa gtcaatcagc aaccacacat tcaggggact gaaggttaca
     1801 caaaagaagc aagagtcagc ctggtggggg tgaggatggg ggtgagggtg ctttctggtg
     1861 ggcagactca aagaggtagt aacacatgtc ttagaaactt agtagttctt aagttttgac
     1921 agtcattctt tgagcagttt acttcagagc atgtcagcag caggacagca gatcaaaccc
     1981 ccagaggtgt catgaaacac aagaatctgg gaaatgaaag tatggttcct agatatttgg
     2041 aacctgatga gagatgagag gtcggagtgg gagacagcaa ccatatgctc agagataatg
     2101 ggctaattgg ggttaaggtt tctgtgtttg aacgtgaact tgattctgaa aaatcagaga
     2161 aaggagttgg agttgtaaat agtctgagaa atcctgtgaa ggtcaagacc agaggcggga
     2221 gaccagctgg taggcggctt ggttggcagt aagagctggg ctaggggaag tcaagcacaa
     2281 gtcctcctaa gtttctgcct ggagcacttg gtaagtgatg gtggcagcca ttcggataag
     2341 atgcccaagg cttgggctgc taagctcgac tgtggtcctc tctggcttaa gaactggtgg
     2401 gagggggctg gggatttagc tcagtggtag agcgcttacc taggaagcgc aaggccctgg
     2461 gttcggtccc cagctccgaa aaaaagaacc aaaaaaaaaa aaaaaaaaaa aagaactggt
     2521 gggagataga aagatcaact ggataaataa ggggacatct gtgagagaca tgggctttga
     2581 agttgtcagc atgtggtgtc ctgg
//
