LOCUS       NM_001106677            3411 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus EF-hand calcium binding domain 14 (Efcab14),
            mRNA.
ACCESSION   NM_001106677 XM_001064076 XM_001064133 XM_001064193 XM_216499
VERSION     NM_001106677.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Feb 23, 2012 this sequence version replaced NM_001106677.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.23790.1,
                                           SRR26643295.22256.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-565               JAXUCZ010000005.1  134455476-134456040
            566-714             JAXUCZ010000005.1  134457633-134457781
            715-860             JAXUCZ010000005.1  134463611-134463756
            861-959             JAXUCZ010000005.1  134471035-134471133
            960-1070            JAXUCZ010000005.1  134475197-134475307
            1071-1157           JAXUCZ010000005.1  134477127-134477213
            1158-1349           JAXUCZ010000005.1  134478167-134478358
            1350-1430           JAXUCZ010000005.1  134480199-134480279
            1431-1542           JAXUCZ010000005.1  134482575-134482686
            1543-1662           JAXUCZ010000005.1  134484364-134484483
            1663-3411           JAXUCZ010000005.1  134491966-134493714
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q35"
     gene            1..3411
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /note="EF-hand calcium binding domain 14"
                     /db_xref="GeneID:298425"
                     /db_xref="RGD:1310351"
     exon            1..565
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     CDS             384..1838
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /codon_start=1
                     /product="EF-hand calcium-binding domain-containing
                     protein 14"
                     /protein_id="NP_001100147.1"
                     /db_xref="GeneID:298425"
                     /db_xref="RGD:1310351"
                     /translation="MKKRKELNALIGLAGDSRRKKTKQGSSSHRLLRTEPPDSDSASS
                     SEEEEFGAIGNRSRFVKGDYVRCCKICYPLCAFVILAACVVACVGLVWMQMALKEDLD
                     VLKEKFRTMESNQKSSFQEIPKLNEELLSKEKQLEKIESGELGLSRVWTNITEMNKQI
                     SLLSSAVNHLKANVKSAADLLSLPSTVEGLQKSVASIGNTLNSVSLAVEAIQKTVDEH
                     KATLELLQGSVETNGSNQIMPSPPPPSELDNRTHSESAKQDILYLHNSLEEVNSTVVG
                     YQRQNDLKLKGMSETLSNLTQRLDLIESDVVALSKAEQRTNVSSSMMGNRAASLKRES
                     SMTNRTDAVKAQSIKKEDNSNSQVSGLREKLQLISALTNKPESNRPPETTDEEQVQNF
                     TSDPSTLPKFSQFLGDQTETQLKPISLPGISSIKDLQDLFHKTGQDVDGMLTYQEIWN
                     SLGSAMPRPEHLRAFDSNGDGRYSFLELRVALGI"
     exon            566..714
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            715..860
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            861..959
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            960..1070
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1071..1157
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1158..1349
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1350..1430
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1431..1542
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1543..1662
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
     exon            1663..3411
                     /gene="Efcab14"
                     /gene_synonym="RGD1310351"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttctggag cactcctaga aatattggct gcctacacga ctaagactct cgtgcttgac
       61 ttagtgggtt gtttttgttt tgttttcctt ttgacaggta atagttgttt caggaagtta
      121 tccatttgga tcgccagttc cttggccatc tctatgtaac tccccctccc caccccccat
      181 ccatctgagc ccaatttcct ctgggctcca ttctccagcc ctaactagat ctggtcagtc
      241 ccacctctgg gtgggagtga tcagggggct ctggcccagg atttccaacc ctggaaggca
      301 gctccaagtc agcgagagag ttgggttttg gctacgaacc tggcagctca ggagtgggcc
      361 cgccactcac cccccacaaa aagatgaaaa agcgcaaaga actcaatgca ttgatcggct
      421 tggctggtga cagtcggaga aagaagacca agcaaggctc aagtagccat cgcctgcttc
      481 gcactgaacc tcctgactca gactcagcgt ccagctcaga ggaagaggaa tttggagcaa
      541 ttggaaatcg ctctcgtttt gtcaagggag actatgtccg atgctgcaag atctgctatc
      601 ccctctgtgc ctttgtcatc ctcgcagcct gtgttgtggc ctgcgtgggc ttggtgtgga
      661 tgcaaatggc tctcaaggag gatctggatg tcctcaagga aaaatttcga acaatggagt
      721 ctaatcagaa aagctcattc caggaaatcc ccaaacttaa tgaagaactt ctcagcaaag
      781 aaaagcaact tgagaagatt gagtctgggg agctgggctt aagcagagtc tggaccaaca
      841 tcacagaaat gaataagcag atttctctgt tgagttctgc agtaaaccac ctaaaagcca
      901 atgtcaagtc agccgcagac ttacttagcc tgcctagcac tgtagaggga cttcagaaga
      961 gtgtcgcttc cattggcaat acgttgaaca gtgtcagcct tgctgtagag gcaatacaga
     1021 agaccgtgga tgaacacaag gccaccttgg agttactgca gggcagtgtg gagaccaatg
     1081 gaagcaacca aatcatgcca tcgcctccgc ctccatcaga acttgacaac agaacccaca
     1141 gtgaaagtgc aaaacaggat atcctgtacc tgcacaactc cttagaggag gtcaacagta
     1201 ctgtagtggg ataccagaga cagaatgacc ttaaactcaa ggggatgagc gagaccctca
     1261 gtaacctgac acagagactc gacctgatag aaagtgatgt ggttgcactg agcaaagcag
     1321 aacagagaac aaacgtgagc tccagcatga tgggtaatag ggctgccagt ctgaaaagag
     1381 agtcttcgat gaccaacaga actgatgctg taaaggccca aagcataaag aaagaagata
     1441 attcaaattc tcaggtatcg gggctgcgag aaaaactgca gctgatcagt gctctcacaa
     1501 acaaacccga aagcaacagg cctccagaga ccacagatga ggagcaagta cagaacttca
     1561 catcagatcc ttcaacattg ccaaaattct cacagtttct tggagaccaa actgagaccc
     1621 aactaaaacc tatctccctg cctgggattt ctagcatcaa agatcttcag gatttattcc
     1681 acaagactgg tcaagatgtg gatgggatgc tgacctacca ggaaatctgg aattccctag
     1741 gttctgccat gccaagacca gaacacttga gagcatttga ttccaatgga gacgggagat
     1801 actccttcct ggagctaaga gtagctttag gtatctagtc ccatcagaca taaatgatgg
     1861 atgaaatgga tgtgcagccc ggactaccta aaatctactt acctaaaaag gaaaaaaaaa
     1921 aactcttaac caactcatca gtcctccagc ccttcatact actgtagcaa acacattgtc
     1981 accttttaac ttgtttgaaa atgctattta aaaaaattat ttttttaaaa aaaattttac
     2041 ttaaaatatg atgtttggaa atctatgatt tcatgaagcc agtgagatct tgtaacttaa
     2101 agttgtcagg aaaaaataat aaagctctct tctctttcct gtttttgagg ggaagagaat
     2161 ttacctttta aagctggaaa gtgtgtgtgt atagagataa taagtcactg tttatatttc
     2221 atatgaattt gccttaaatt agctgcactt tatagagcct cagaatacgt cttttctttg
     2281 aaagaggagt cttttgtttg tacatatgta aaatgaaaga ttgtgcatat tgcatagaca
     2341 gaaggttggc tttgaacaga atgaatggat aacttgttat gagtagttga cagtctgctc
     2401 tgggtggcag ctgaaactct tcacatctcc ttaaggcaac cctcagatgc ctgggcgcta
     2461 ctatagggtt gaagctggga catcagttca ggtatggatg ctatgcagag ggtgccagtt
     2521 ctgagctcag gaacatcaga ttccgggcca ttgctcctat tcctaaccta agaaccagag
     2581 aagtcttact gggatattcc tcatttttaa ttatctttga aggtttatga gcataaagtt
     2641 actcagtggg aaattgcttt cccatcaagt aagcgagatt gtcttctcta cccacccact
     2701 ccagactacc ttaaagttgt gactgcctac cttctgcacc atgtccagtc tggaatggga
     2761 aggctcatgt cctgggttgc tatgcccaag agctagttgc ccagagcact agagaaaagc
     2821 tctgagtttt gacttgggaa acagtacctt tagggatttt acctttagga taaccaagta
     2881 cttgctctat ttcttggcag gttgcctaaa gccaaaatgt agtcagatga aacacgaaat
     2941 catattcttt cctcattgtt ccctcagagg gagctatggg ctttctgtcc agaggatgcc
     3001 gcatggagca ggagccttct ggtgatgggg tcagttttcc caggtctaaa ggcaggtgtc
     3061 atgcttcccc tttacatgct ttgtgggcaa gtcaggaaag gtctgactag aaggaactcg
     3121 cctttcacca acatgttgag aacactcagt gttcttaggg gtctcggggc aactccagta
     3181 gaagacctta cagaaccaca cattgctata gccagtcagg gaaacactgg ggatgctgtt
     3241 gtgatagtat agatcactcc tacctaattt tgttcaagtt gccctgtcag ctgtggatac
     3301 actctggtat cctcaaacct ttaaagacat ttgtttttcc cttcgccttg ctttgctttg
     3361 ctttttatgt tttgtttctt ttttatgata ttcagtttag tgttgttttt t
//
