LOCUS       NM_001024350            1497 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus EF-hand calcium binding domain 11 (Efcab11),
            mRNA.
ACCESSION   NM_001024350 XM_576087
VERSION     NM_001024350.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Herlan,L., Schulz,A., Schulte,L., Schulz,H., Hubner,N. and
            Kreutz,R.
  TITLE     Novel candidate genes for impaired nephron development in a rat
            model with inherited nephron deficit and albuminuria
  JOURNAL   Clin Exp Pharmacol Physiol 42 (10), 1051-1058 (2015)
   PUBMED   26192016
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079408.1.
            
            On May 27, 2005 this sequence version replaced XM_576087.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079408.1, CK469542.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16418988 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..1497
                     /gene="Efcab11"
                     /note="EF-hand calcium binding domain 11"
                     /db_xref="GeneID:500705"
                     /db_xref="RGD:1565006"
     exon            1..140
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
     CDS             66..554
                     /gene="Efcab11"
                     /note="EF-hand domain-containing protein C14orf143
                     homolog"
                     /codon_start=1
                     /product="EF-hand calcium-binding domain-containing
                     protein 11"
                     /protein_id="NP_001019521.1"
                     /db_xref="GeneID:500705"
                     /db_xref="RGD:1565006"
                     /translation="MFLSEAGARPRAGEISASERRKWVEVFKACDEDNKGYLSREDFK
                     VAIVMLFGYKPSKIEADAVMSSANPDTSGVSLEGFLNVVQRKKEAQLYRNEIRHIFTA
                     FDVHYRGFLTLEDFKRAFSQVAPKLPSRTVLEVFREADQDSDGHVSFRDFEYAMNHGK
                     AK"
     exon            141..236
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
     exon            237..282
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
     exon            283..384
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
     exon            385..475
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
     exon            476..1474
                     /gene="Efcab11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccgcagtg gctgttctcg ctggagcgaa ggagcttccc tggcttggtc ttggtgtcgg
       61 tggggatgtt cctgtcagag gcaggcgcca ggccgcgagc aggcgaaatc agcgcctcag
      121 aacgcaggaa atgggtggaa gtatttaaag catgtgatga agacaacaaa ggctacttaa
      181 gccgggaaga ctttaaggtt gcgattgtaa tgctgtttgg gtacaaaccc tccaagatag
      241 aagcggatgc tgtgatgtcc tcagcaaatc ccgacacttc tggtgtatca cttgaggggt
      301 ttttaaatgt cgtacagaga aagaaggagg cgcagctcta tcggaatgag ataaggcaca
      361 tcttcacagc attcgacgtg cactatcgtg gatttttaac tctagaagat ttcaaaaggg
      421 cgtttagtca agtggctccc aagctgccgt cgaggacagt gctggaggtg ttcagggagg
      481 cagatcaaga ctcagatggt cacgtcagct tccgagactt tgaatacgcc atgaaccatg
      541 ggaaagcaaa atgagccagg ccggacactt gtgaactact tctggagaac ctgtgcagat
      601 ggatgaactg taatctagta atcacacaga ccacactcta ggaagggcat gacactgtgt
      661 acttgtgcgt taactcttag ctataggttt ggaatgttga tattggacct agaggtggga
      721 ctctccttct gtgtctctac cagcccagtg ggtttcgggg ggttttccct tcctactcta
      781 gtcagctctg cctcctccac actgtgagtt gaaggctctg ctcactccac atgggtccct
      841 cgctctcatc agctccgggg agggttcgct ttgctctgct agtggtgtca ctgccattca
      901 cttgctccac cttggctgaa ggtcaagctt cctgagtcca agccatgagc cagtgctggg
      961 aaaacagaga cttcctcaga caatgtcccc ggagtagcga tcggtgcaca gggcaccagt
     1021 gtgcacagca taggaagcag ctcgtgtggg cgccagcatt cttcatacag agaaggccag
     1081 aatgcagttg gggtcttaat gggcagaagg gtgtgatttt tgggtccctt tagcatagcc
     1141 tgggcctgag cctgggcttc ttccttcaga gcagccggct ggagaagcgg gccagcagcc
     1201 ctctgctgca tacttccagt tctgggtagt tttgccgagt acctggagat tcagccatcc
     1261 tagggttagg aggctctaca tcccgccatg ccccagcgcg ccggtgacta ccttcccgga
     1321 cctcatggag gcacaacata gcatctacta aaaagaattc tgaaatactg atattatcac
     1381 tgtaagtgtt tcacaacatt aacatttgta aaataattaa tgtaatttat gtctctaaag
     1441 tgttaaacat taaaagatca agtaaaaata taaaaaaaaa aaaaaaaaaa aaaaaaa
//
