LOCUS       XM_017594767            1064 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation elongation
            factor 1 delta (Eef1d), transcript variant X10, mRNA.
ACCESSION   XM_017594767
VERSION     XM_017594767.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594767.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594767.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1064
                     /gene="Eef1d"
                     /note="eukaryotic translation elongation factor 1 delta;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 37 ESTs, 18 long SRA reads, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 220 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:300033"
                     /db_xref="RGD:621174"
     CDS             98..1000
                     /gene="Eef1d"
                     /codon_start=1
                     /product="elongation factor 1-delta isoform X7"
                     /protein_id="XP_017450256.1"
                     /db_xref="GeneID:300033"
                     /db_xref="RGD:621174"
                     /translation="MATNFLMHEKIWFDKFKYDDAERRFYEQMNGPVTAGSRQENGAS
                     VILRDIARARENIQKSLAGLKVMLPNSPETLGQATPRTSSGPGASSGPGGDHSDLIVR
                     IASLEVENQNLRGVVQDLQQAISKLEVRLSTLEKSSPTHRATAPQTQHVSPMRQVEPP
                     AKKGATPAEDDEDNDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSIL
                     LDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD
                     LLEEEITKFEEHVQSVDIAAFNKI"
ORIGIN      
        1 gcgttttccg ggagctgcgt ggtcgccctc cctctccatt gcagtcctga gctcgcagtt
       61 cccggttttg gttgctgcgt ccttggctgt cgtaaaaatg gctacaaact ttctcatgca
      121 cgagaaaatc tggtttgaca agtttaaata tgacgatgca gaaaggagat tctacgagca
      181 gatgaatggg cctgtgaccg ctggctctcg gcaggagaat ggcgccagcg tgatcctccg
      241 agacattgca agagccagag agaacatcca gaaatccttg gctggactca aggtgatgct
      301 gcccaactcc cctgagaccc tgggccaggc cacccctagg actagttcag gccctggagc
      361 ctccagtgga cctggtggag accacagtga cctcattgtg cggattgcca gtctggaagt
      421 agagaaccag aaccttcgag gcgtggtgca agatttgcag caggccattt ccaagttgga
      481 ggtccggctg agcactctgg agaagagttc acctactcac cgagctacag ccccacagac
      541 ccaacatgtc tctcctatgc gtcaagtgga gcccccagcc aagaaaggag ccacaccagc
      601 agaggacgac gaggacaatg acattgacct gttcggcagt gatgaggaag aggaagataa
      661 ggaggctgcc cgactacggg aagagaggct acgccagtac gcagagaaga aggccaagaa
      721 gcccacactg gtggccaaat cctccatcct cttggatgtt aaaccttggg atgatgagac
      781 agacatggcc cagctagaga cttgtgtgcg ttccatccaa ttggacggac tggtttgggg
      841 ggcctccaag ctcgtgcctg tcggctatgg tatccggaag ctgcagatcc agtgtgtggt
      901 agaggatgac aaagtgggca ccgacttgct cgaagaggag atcaccaagt ttgaggagca
      961 tgtgcagagt gtcgacattg cagccttcaa caagatctga aagtccgaga gtgtgtggtt
     1021 tcatgtgtgt gagcactgct gagattaaag actgagactc cgca
//
