LOCUS       NM_001013104            2042 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus eukaryotic translation elongation factor 1 delta
            (Eef1d), mRNA.
ACCESSION   NM_001013104 XM_216967
VERSION     NM_001013104.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Kaitsuka,T., Tomizawa,K. and Matsushita,M.
  TITLE     Transformation of eEF1Bdelta into heat-shock response transcription
            factor by alternative splicing
  JOURNAL   EMBO Rep 12 (7), 673-681 (2011)
   PUBMED   21597468
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2042)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   4  (bases 1 to 2042)
  AUTHORS   Trinidad,J.C., Thalhammer,A., Specht,C.G., Lynn,A.J., Baker,P.R.,
            Schoepfer,R. and Burlingame,A.L.
  TITLE     Quantitative analysis of synaptic phosphorylation and protein
            expression
  JOURNAL   Mol Cell Proteomics 7 (4), 684-696 (2008)
   PUBMED   18056256
REFERENCE   5  (bases 1 to 2042)
  AUTHORS   Matsuda,A., Suzuki,Y., Honda,G., Muramatsu,S., Matsuzaki,O.,
            Nagano,Y., Doi,T., Shimotohno,K., Harada,T., Nishida,E., Hayashi,H.
            and Sugano,S.
  TITLE     Large-scale identification and characterization of human genes that
            activate NF-kappaB and MAPK signaling pathways
  JOURNAL   Oncogene 22 (21), 3307-3318 (2003)
   PUBMED   12761501
REFERENCE   6  (bases 1 to 2042)
  AUTHORS   Joseph,P., Lei,Y.X., Whong,W.Z. and Ong,T.M.
  TITLE     Oncogenic potential of mouse translation elongation factor-1 delta,
            a novel cadmium-responsive proto-oncogene
  JOURNAL   J Biol Chem 277 (8), 6131-6136 (2002)
   PUBMED   11711542
REFERENCE   7  (bases 1 to 2042)
  AUTHORS   Sanders,J., Brandsma,M., Janssen,G.M., Dijk,J. and Moller,W.
  TITLE     Immunofluorescence studies of human fibroblasts demonstrate the
            presence of the complex of elongation factor-1 beta gamma delta in
            the endoplasmic reticulum
  JOURNAL   J Cell Sci 109 (Pt 5), 1113-1117 (1996)
   PUBMED   8743958
REFERENCE   8  (bases 1 to 2042)
  AUTHORS   Jung,M., Kondratyev,A.D. and Dritschilo,A.
  TITLE     Elongation factor 1 delta is enhanced following exposure to
            ionizing radiation
  JOURNAL   Cancer Res 54 (10), 2541-2543 (1994)
   PUBMED   8168075
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079391.1.
            
            On Apr 20, 2005 this sequence version replaced XM_216967.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079391.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2042
                     /gene="Eef1d"
                     /note="eukaryotic translation elongation factor 1 delta"
                     /db_xref="GeneID:300033"
                     /db_xref="RGD:621174"
     exon            1..1104
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     CDS             2..1954
                     /gene="Eef1d"
                     /note="translation elongation factor 1-delta subunit;
                     guanine nucleotide exchange protein; EF-1-delta"
                     /codon_start=1
                     /product="elongation factor 1-delta"
                     /protein_id="NP_001013122.1"
                     /db_xref="GeneID:300033"
                     /db_xref="RGD:621174"
                     /translation="MRSGKASCALETVWEDKHKYEEAERRFHEHEATQAAAASVQQLL
                     AEVPAVNGPSSQEDAEDTDEAETPNTSSRSDPRKSHECKKPLQKKRKRSPKSWLGQAD
                     LALVGLSADHVWLDKPLFDQAESSYRQRLADVAAQAAQSPALAPRGPCTHGSHVACHH
                     VTWGIWVNKSCFDQAERAFVEWSQALLLAAEGSHREGTPDTGQQAVTPDLALACQPCP
                     PANGQPPLGSLQALVREVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERASQAEGTR
                     RGRRDRRSRNTVGNKRAGSKRADGEAPSALPYWYFLHKDAEAPWLSKPTYDSAECRHH
                     AAEALRIAWRLEAASLAHRPTPRSGPSMSSLRPKKMATNFLMHEKIWFDKFKYDDAER
                     RFYEQMNGPVTAGSRQENGASVILRDIARARENIQKSLAGSSGPGASSGPGGDHSDLI
                     VRIASLEVENQNLRGVVQDLQQAISKLEVRLSTLEKSSPTHRATAPQTQHVSPMRQVE
                     PPAKKGATPAEDDEDNDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSS
                     ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVG
                     TDLLEEEITKFEEHVQSVDIAAFNKI"
     exon            1105..1225
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1226..1297
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1298..1397
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1398..1498
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1720
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1721..1915
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
     exon            1916..2018
                     /gene="Eef1d"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatgaggagt gggaaggcct cttgtgcgct ggagaccgtc tgggaggaca agcacaagta
       61 tgaggaagcc gagcggcgct tccacgagca tgaggccaca caagccgccg ccgcctctgt
      121 ccagcagctc ctggccgaag tgccagctgt gaacgggccc agcagccagg aggacgcgga
      181 ggacaccgac gaggcagaaa cccccaacac cagcagcagg agtgatccta ggaagagcca
      241 cgagtgcaag aagccgttac agaaaaagag gaagcgctcc ccgaagagtt ggcttggcca
      301 ggcggacctg gcccttgtgg gcctctcagc tgaccacgta tggttggaca agccactctt
      361 tgaccaggca gaaagctcct accgccagag gctggcagat gtagctgccc aggcagccca
      421 gtcgcctgcc ctggcccctc gagggccctg tacacatgga agccatgtgg cgtgccacca
      481 tgtgacctgg gggatctggg tcaacaagtc ttgctttgat caagctgagc gggcttttgt
      541 ggagtggtct caggccttgc tgctggctgc agaggggagc catagggagg ggactcctga
      601 cacaggccag caggctgtca ctcctgacct ggccttggcc tgccagcctt gtccaccagc
      661 caatggccag cctcctctgg gcagcctgca ggcactggtg agggaggtat ggctggaaaa
      721 gccccgttat gatgcagctg aaaggggctt ctatgaggcc ctatttgatg gccacccccc
      781 agggaaagtg cgcctgcagg agcgagccag tcaggcggag ggtactcgga ggggccgcag
      841 agaccgtcgg agccgcaata ctgtaggaaa caagcgagct gggtcaaaac gggccgatgg
      901 ggaggctcct tctgccttgc cctactggta cttcctgcac aaggacgcag aggccccctg
      961 gcttagcaag ccgacctacg acagcgccga gtgtcgccac catgccgccg aggccctgcg
     1021 gattgcctgg cgcctagaag ctgcctcact ggctcaccga cccacgcccc gttctggccc
     1081 atccatgtcc agcctgagac ccaaaaaaat ggctacaaac tttctcatgc acgagaaaat
     1141 ctggtttgac aagtttaaat atgacgatgc agaaaggaga ttctacgagc agatgaatgg
     1201 gcctgtgacc gctggctctc ggcaggagaa tggcgccagc gtgatcctcc gagacattgc
     1261 aagagccaga gagaacatcc agaaatcctt ggctggaagt tcaggccctg gagcctccag
     1321 tggacctggt ggagaccaca gtgacctcat tgtgcggatt gccagtctgg aagtagagaa
     1381 ccagaacctt cgaggcgtgg tgcaagattt gcagcaggcc atttccaagt tggaggtccg
     1441 gctgagcact ctggagaaga gttcacctac tcaccgagct acagccccac agacccaaca
     1501 tgtctctcct atgcgtcaag tggagccccc agccaagaaa ggagccacac cagcagagga
     1561 cgacgaggac aatgacattg acctgttcgg cagtgatgag gaagaggaag ataaggaggc
     1621 tgcccgacta cgggaagaga ggctacgcca gtacgcagag aagaaggcca agaagcccac
     1681 actggtggcc aaatcctcca tcctcttgga tgttaaacct tgggatgatg agacagacat
     1741 ggcccagcta gagacttgtg tgcgttccat ccaattggac ggactggttt ggggggcctc
     1801 caagctcgtg cctgtcggct atggtatccg gaagctgcag atccagtgtg tggtagagga
     1861 tgacaaagtg ggcaccgact tgctcgaaga ggagatcacc aagtttgagg agcatgtgca
     1921 gagtgtcgac attgcagcct tcaacaagat ctgaaagtcc gagagtgtgt ggtttcatgt
     1981 gtgtgagcac tgctgagatt aaagactgag actccgcaaa aaaaaaaaaa aaaaaaaaaa
     2041 aa
//
