LOCUS       XM_003750328            2544 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EEF1A lysine methyltransferase 3
            (Eef1akmt3), mRNA.
ACCESSION   XM_003750328
VERSION     XM_003750328.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750328.5.
            
            On Jan 21, 2021 this sequence version replaced XM_003750328.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-430               JACYVU010000185.1  45494509-45494938   c
            431-542             JACYVU010000185.1  45494275-45494386   c
            543-919             JACYVU010000185.1  45485307-45485683   c
            920-921             "NN"               1-2
            922-2544            JACYVU010000185.1  45483684-45485306   c
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2544
                     /gene="Eef1akmt3"
                     /note="EEF1A lysine methyltransferase 3; The sequence of
                     the model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 6 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 18 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:679247"
                     /db_xref="RGD:1590711"
     CDS             32..949
                     /gene="Eef1akmt3"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:539..541,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: EEF1A lysine
                     methyltransferase 3"
                     /protein_id="XP_003750376.2"
                     /db_xref="GeneID:679247"
                     /db_xref="RGD:1590711"
                     /translation="MVLCGSCSVCTRDPGSGVIPIHLQEIQLEEGGRTGEAGPDVWEQ
                     PIWLAVPSLNPAQIEGIRALAGVHGLSICRMASSHSDPESEPESVFPREVGLFTDSYS
                     ESSRFCFCGHELSITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRDKKVIELGAGT
                     GIVGILAALXGGDVTITDLPLALEQIQDNVHANVPPGGRAQVCALSWGIDQHVFPGNY
                     DLVLGADIVYLEPTFPMLLGTLRHLCGPHGTIYLASKMRAEHGAETFFQHLLPQHFHL
                     ELAQRDEDVNVNIYRARHRDXPAGQHPFC"
ORIGIN      
        1 tcctggtggt ctcaaaccaa atctgtcctg tatggtgctg tgtgggtcct gttctgtgtg
       61 caccagggat ccgggctcgg gggtcatccc tatccatctc caggaaatcc agctggagga
      121 aggagggcga actggggagg cggggcccga tgtctgggag cagcccatat ggctggcagt
      181 ccccagcctc aaccccgcac agattgaggg gatccgagcg ctagccggag tgcacgggct
      241 ctctatctgc cgaatggcca gctctcactc ggatccggag tcggagcccg aatctgtgtt
      301 cccacgggag gtcgggctct tcaccgactc ttactcggag agcagccggt tctgcttctg
      361 tggacacgag ctgagcatca cgcaaaactt tgggtcccgc cttggggtgg ccgcacgcgt
      421 gtgggatgcg gctctgagcc tgtgtaacta tttcgagagt caaaacgtgg attttcgaga
      481 caagaaggtg atcgaactgg gcgcggggac aggcatcgtg ggaatcttgg cggcgctgta
      541 ggggggggat gttaccatca ctgatttgcc actggcccta gagcaaatcc aggataatgt
      601 ccacgctaat gtgccacccg gaggccgggc tcaggtgtgc gccttgtcct ggggaattga
      661 ccagcatgtc tttcctggaa actatgactt ggtgctgggg gcagatatcg tgtacctgga
      721 acctaccttc ccaatgctgt tggggaccct ccgtcacctg tgtgggcccc acggcaccat
      781 ctacctggcc tccaagatga gagcagaaca cggggcagag accttcttcc agcacctcct
      841 gccccagcac ttccacctgg agctggccca gagggatgag gatgtgaatg tcaacatcta
      901 tagggccagg cacagggacn nacctgctgg acagcacccg ttctgttgac ctaactcttg
      961 tctgaggaat ggcatccctc cagagccagg aacatcagga caaaagaaaa ggatggattg
     1021 cccttcctcc ttccctcctc cctttggttc ccctaattat tcttggggag atgcagcagg
     1081 gtggggcttg ttaagaatgg tggagcccca gaagctttga gtttaaaaca caaggaaagc
     1141 gcccaacact tgccttcaaa ggaggaataa ggaagggaaa ctgtgaatag tccctgtaga
     1201 gagatcacca ctgatcacct ctgggtcttt aaacagaata gacttttttt tttttttttt
     1261 tggttctttt tttcggagct ggggacagaa cccagggcct tgcgcttcct aggtaagtgc
     1321 tctaccactg agctaaatcc ccagctccca gaatagactt tttaaaaaac cacactcttt
     1381 gacatttctt aaggaaaaaa aatgagcatg aatcatctct tctgtatccc caaacatgta
     1441 gttattgaca gaaagttggg tgctgtgcct cagaacacct gtttcttgcc tgctgaaatt
     1501 agattcttga taggatgagt cttccttgat ctgagccccc ggaggagagt cagagatgtc
     1561 ccctggactg tagtttcttc gtcctttgca aagctcaaga ccttgatcac ccgcattttg
     1621 taccaaattc tggactgggt tctaggttct tctgatctct agctcttcct tcttgttttg
     1681 cctttggttc tctctccctc tggagtagtc tggctctttt tttttttttc ttctttttac
     1741 ttagcctttc agcacacaac catctttggt gtgtctgcca ctcttctctt aaccttgacg
     1801 tcatgcctca aacccttgcc atttccaaaa actgctctag ttagcttcta ctgcaagaac
     1861 aaacgtcttt gcttggtact caggccacac actgtctgct cctaaaggac tcaattccta
     1921 ctctgtttct cttgcacttt tagccaaatt gcaaaaggct tacgctttgt tccctaaccc
     1981 tatgcaggca ttccctgact tctccacttt ccagatgatt cccttccaag aacgatcatt
     2041 tctctctgtc taaactcaag ttttgcttct ggaaaataac acccaaacca aaaatcttcc
     2101 ttttcctgag ctttctgctt ggatgtggtt tctttgtctg gagatctttt aactgtttaa
     2161 ggacctttta ttgccttacc tgattgtttt ttcctcagac caatagatcc attggagggc
     2221 agagctatga tttattcatc actgatcccc tgaaactggc aacagctctg ggcacacatg
     2281 tgttcagcag atattttgtt aattcagcaa ttatttattg ggtttgttga agggactctg
     2341 cttctccagg tgaccttggg caatttcctg agcccaccta cctacctgcg gtttgtcctg
     2401 tgtcataaac ggatattgaa agtacattgg aaataaagaa acaaagtatc acctacatgt
     2461 cttgtgttgt tatttcgtgg caactttatc gctcagtttt accggctaag tcttttgtga
     2521 aatgttttaa tgaagcaggc aaaa
//
