LOCUS       NM_001393822             920 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus EEF1A lysine methyltransferase 1 (Eef1akmt1),
            transcript variant 2, mRNA.
ACCESSION   NM_001393822
VERSION     NM_001393822.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Hamey,J.J., Winter,D.L., Yagoub,D., Overall,C.M., Hart-Smith,G. and
            Wilkins,M.R.
  TITLE     Novel N-terminal and Lysine Methyltransferases That Target
            Translation Elongation Factor 1A in Yeast and Human
  JOURNAL   Mol Cell Proteomics 15 (1), 164-176 (2016)
   PUBMED   26545399
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV725048.1, EV770637.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840108,
                                           SAMN12840110 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               JAXUCZ010000015.1  35826817-35826921   c
            106-268             JAXUCZ010000015.1  35821782-35821944   c
            269-351             JAXUCZ010000015.1  35817173-35817255   c
            352-632             JAXUCZ010000015.1  35810778-35811058   c
            633-920             JAXUCZ010000015.1  35809842-35810129   c
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..920
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /note="EEF1A lysine methyltransferase 1"
                     /db_xref="GeneID:290279"
                     /db_xref="RGD:1306762"
     exon            1..105
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /inference="alignment:Splign:2.1.0"
     exon            106..268
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..769
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /note="N(6)-adenine-specific DNA methyltransferase 2; N-6
                     adenine-specific DNA methyltransferase 2 (putative);
                     protein-lysine N-methyltransferase N6AMT2; eukaryotic
                     translation elongation factor 1 alpha lysine
                     methyltransferase 1"
                     /codon_start=1
                     /product="EEF1A lysine methyltransferase 1"
                     /protein_id="NP_001380751.1"
                     /db_xref="GeneID:290279"
                     /db_xref="RGD:1306762"
                     /translation="MSDSEDDDIPQLSSHTLAALQEFYAEQKQTINPGGDDKYNVGVI
                     EENWQLSQFWYSQDTALRLAQEAINAVGEGGRIACVSAPSVYQKLRELRREDISVYIF
                     EYDRRFAIYGDEFIFYDYNNPLDLPEGVAPHSFDIVVADPPYLSEECLRKTSETIQFL
                     TQGKILLCTGAIMEEQAAQLLGVKVCKFIPEHSRNLANEFRCYTNYDSGLDCET"
     exon            269..351
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /inference="alignment:Splign:2.1.0"
     exon            352..632
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /inference="alignment:Splign:2.1.0"
     exon            633..920
                     /gene="Eef1akmt1"
                     /gene_synonym="N6amt2; RGD1306762"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccccctcc ttccggtcgg cttcagcgcc tacgcggagg tctccgcccc tcgcaccttt
       61 ttttttcttt ttcctcgtat tgtgccgact gcgcatgtgt cagtggtcgc agacaccttg
      121 tgaaatgagc gattcagaag acgatgacat accccagctt tcttcccaca ccttagcagc
      181 tctgcaggag ttttatgctg agcagaagca aaccatcaac ccaggagggg atgataaata
      241 caacgttggg gtgatagagg agaactggca gctgagccag ttctggtaca gtcaggacac
      301 tgctttgaga cttgcacagg aagccatcaa tgctgtggga gaaggcggca gaattgcatg
      361 tgtgagcgca cccagtgtgt accagaagct ccgggagctt cgtagggaag acatctctgt
      421 atacatcttt gaatacgaca gaagattcgc catatatggg gatgagttta tcttctatga
      481 ctacaataat ccactggact tgcctgaggg agtcgccccg catagctttg acattgtggt
      541 tgcagaccct ccttacctgt ctgaggagtg tctcaggaag acatccgaaa ccatccagtt
      601 cctgactcag ggcaagattc tgctgtgcac aggcgccatc atggaggagc aggcagctca
      661 gctcctgggt gtgaaggtgt gcaagtttat tccagaacat tcccgaaact tggccaatga
      721 gttccgctgt tatacgaact atgactccgg gctggactgt gaaacctaga gtcacatgac
      781 agcagttcca gtgagggccc cacatccatt tcccagttct cttcctgttg aacgtcgtga
      841 cctctccctc gctctgccac gactgggact cccatggctt atttttcaaa ataaaataaa
      901 acttctcatt gctgattcta
//
