LOCUS       XM_002728994            4639 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EGF like repeats and discoidin domains
            3 (Edil3), transcript variant X1, mRNA.
ACCESSION   XM_002728994
VERSION     XM_002728994.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 24, 2024 this sequence was replaced by
            NM_001427434.1.
            
            On Jan 21, 2021 this sequence version replaced XM_002728994.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4639
                     /gene="Edil3"
                     /note="EGF like repeats and discoidin domains 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     59 samples with support for all annotated introns"
                     /db_xref="GeneID:688400"
                     /db_xref="RGD:1588887"
     CDS             504..1943
                     /gene="Edil3"
                     /codon_start=1
                     /product="EGF-like repeat and discoidin I-like
                     domain-containing protein 3 isoform X1"
                     /protein_id="XP_002729040.2"
                     /db_xref="GeneID:688400"
                     /db_xref="RGD:1588887"
                     /translation="MKHLVAAWLLVGLLGVPQFVKGDICNPNPCENGGICLSGLADDS
                     FSCECPDGFTDPNCSSVVEVASDEEKPTSAGPCIPNPCHNGGTCEISEAYRGDTFIDY
                     VCKCPQGFNGIHCQHNINECEAEPCRNGGICTDLVANYSCECPGEFMGRNCQYKCSGP
                     LGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTAAENDRWPWIQIN
                     LQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMYKVKGTNEEMVFRGNVDN
                     NTPYANSFTPPIKAQYVRLYPQICRRHCTLRMELFGCELSGCSEPLGMKSGHIQDYQI
                     TASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTGIIT
                     QGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDAKQRKDKVFQGNFDNDTHRKNVIDPPI
                     YARHIRILPWSWYGRITLRSELLGCTEEE"
ORIGIN      
        1 tcagtctcac acgcgcgccg ccactgtttg tacacagtgc gctcttggcc tcaggctcgc
       61 tcccctccag ctcacgcttc attgttctcc aagtcagaag ccccgcagcc gcggcggcag
      121 cagcgtgagc catagtcgct gctggccgct tcgcctgcgg tgcgcgcacg aaaatcgggg
      181 agccaggaac ccagggagcc ggcgctccgc ccgctgtgcc tctgctaaga cccacttgca
      241 gccccagcct atctcaagcg cacccacctc cgcgcatccc agcgcaagcg aagctggggt
      301 gaggggggga gtcacccttt ctctagggcc atcactcttt atcgcccttc ccaagaattt
      361 gtttgaggaa gcgctgcagg aggaagacgt cctcttgaat ctctgacagg gcggggttta
      421 ctgctgtcct gcagggacac ctagcctaca gtgccctccg ctacgacccc ggaccaaccc
      481 gggtcacgtc cgggagaagg atcatgaagc acttggtagc agcctggctt ttggttggac
      541 tcctcggtgt gccccagttc gtcaaagggg acatttgcaa ccccaatccc tgtgaaaatg
      601 gtggcatctg tctgtcagga ttggcggatg attccttttc ctgtgagtgt ccagacggct
      661 tcacagatcc aaactgctct agtgttgtgg aggttgcatc agatgaagaa aagcctactt
      721 cagcaggtcc ctgcatcccc aatccatgcc ataatggagg aacttgtgag ataagtgaag
      781 catatcgggg agacacattc atagactatg tttgtaaatg tccccaggga tttaatggga
      841 ttcactgtca gcacaatata aatgaatgtg aagctgagcc ttgcagaaat ggtggaatat
      901 gtacggacct tgttgccaac tactcctgtg aatgcccagg agaatttatg ggacggaatt
      961 gtcaatataa atgctctggg ccattgggaa ttgaaggtgg gatcatatct aaccagcaaa
     1021 tcacagcttc atctacacat cgagctcttt ttggactaca gaaatggtat ccctactatg
     1081 ctcggcttaa taagaagggc cttataaatg cctggacagc tgctgaaaat gacagatggc
     1141 cgtggattca gataaattta caaagaaaaa tgagagtaac gggtgttatt acccaaggag
     1201 ccaaaaggat tggaagccca gaatacatca aatcctacaa aattgcctac agcaatgacg
     1261 ggaagacctg ggcaatgtac aaagtaaaag gcaccaatga agaaatggtc ttccgtggca
     1321 atgttgataa caacacaccc tacgctaatt cctttacacc tccaatcaaa gctcagtacg
     1381 taagactcta cccccaaatt tgtcgaaggc actgtacatt aagaatggaa ctttttggct
     1441 gtgagctctc aggctgttca gaacctttgg ggatgaaatc cggacatata caagactacc
     1501 agatcaccgc ctccagcatc ttcagaacac tcaacatgga catgttcact tgggaaccga
     1561 ggaaagccag gctggacaag cagggcaaag tgaacgcctg gacttccggc cataatgacc
     1621 agtcacaatg gttacaggtt gatcttcttg tccctaccaa agtgacaggc atcattacac
     1681 aaggcgctaa ggattttggt catgtgcaat ttgttggttc atacaaacta gcctacagca
     1741 atgatgggga acattggacg gtgtaccaag atgcaaagca gagaaaagat aaggtttttc
     1801 aaggcaattt tgataatgat actcacagga aaaatgtcat cgaccctccc atctatgcac
     1861 gacacataag aatccttcct tggtcctggt atggaaggat cactctgcgg tcagagctgc
     1921 tgggctgcac agaggaggaa tgaaggaagg gaccacatat cccacaatgc ttttctttat
     1981 tttcctataa gtatctacat gaaatgaact gtgcaaatct gatagaaaca gcatttgttt
     2041 ttgtcaaagc gttcaaatta cagtaggcta ctgactgtct ttttaggcat tctaagcctg
     2101 ctttttcaat aatttaattt tgtttccttt gctcaactct ctatgtaata tcacaccgtg
     2161 tgaattactc tccttgttct aagaattata tagattggct gaagtatagt aggcataaca
     2221 agtctcctct ttacagcaaa aataaaacta aacaaactca tagtcatcag aaggaagagt
     2281 taagggagaa ttatggtcac tgttcagtta acacataaaa tgttacaatg ttagcaataa
     2341 ggtttttttg ggatgaattc ggattatctt gattattttc ctgtgcctaa cactgttagt
     2401 gtgtattaca gagatttggg gaggaaaatt tgatatgcag taccattaaa agagcaatta
     2461 tagttttaat ttctttactt ataataaaat actttatatt atttatatgc ttcataaata
     2521 ggttaatatt ctttgtcatt ggacttcctc cttttatttg ccttaaagta ttattatcct
     2581 ttaagtttat ttatatacac agaacatgta ttaatatgca ttgaacatga ttggatatca
     2641 gtaaatggtt ctatgttgaa tatcagtaca ttgaacctgt atttttattt ttgaaggaag
     2701 ctatatgtat ttcatgtcaa aaggctatcc tttttgagaa tcccctgtta ccatttagtg
     2761 aaaaagaaca aaaaaaccgc tatggtcctt gaatttaaat cttcatttct ttgaaataat
     2821 agactcatta tctgtgtatt taaaatatta gcaaacgtat gtgagcttag tgttgcacag
     2881 cttggccaag tgcactcaac atttctttgt gaatttccac atttcccgtg aaatgaaatt
     2941 ttcaatgcag tttaaagtca gtgatggttt ctgaagaaag cacattgcat aattatttgt
     3001 gagaagcaat gtatttacta atgacaaaat cataaaccat cttcaggatg aaaattgatt
     3061 tttatttctt ttgcttcaaa cgtcttagaa aaactaagca attatcataa caatttgtta
     3121 ttgataatgg aggcatcatt gacatatgtc tcaaattaaa gctcacactg cctccataaa
     3181 tgtcctccat acctaattta taagcttaac acgtatttat tttataaggc tttgacacag
     3241 agttattgga gttttaaatt gaaggcccag ggaaggaaag ggtggatgtg gatgaaatgc
     3301 acaatactgc tatcctttat ttgctttttg tcgttaatat gtgtgctgtg taaggaaagc
     3361 cactactctt ttgtcccgtc tgttcatgtg ttcacaacat ctctcagtga tgtaaatatg
     3421 cagcagtctt caatcacagc aaagaagtga aagagaaagt caaccacatt gccattttaa
     3481 atgacagcaa attcattgtt ctatagcggc tgtcaggcca aatgtttggc ccatgcccat
     3541 gtgctaattc caccagcttt gttaaaaatc tcttgatttt cagaatataa aatgctgaat
     3601 aattttcaac attttcccaa aacaaaacag ctctatcctc aatattacta tcctaagaaa
     3661 tgtttaaaat tatcaataga gaatatttaa aatagtattt tcaattaaaa tagctctaca
     3721 tagaatcact taagccctag aagtacaaga ttttctacct agtcatggtc cttgtttctc
     3781 ttagtgataa ccgtactact gaatttgtag gtgtttttct ttgcagattc tttacatgta
     3841 atgtaaagtt ccagaaatta tgaataacgt gttgtgctga aatacctttt gaaaccattt
     3901 ttgactttgt gacgctgctg atacctgttt aaaatttgtt ctcgataaaa gttgctagta
     3961 acagtagcag ttaccgtttc aaaagatggt gagagtcttt cccttgcttg tacacttctt
     4021 cccagctcta tgcactacct aaagcatagc atgtgcaatg gacatgcatt tgtccacgag
     4081 ggcgcttgta ttgggaagta gcttgcctat cagttctatc catggcttca agctgaaaca
     4141 tgaatttttt tatttaattt aatttgcaaa taaaatttta caaatacaaa acatggaatc
     4201 ccttaccctt cactctacta cataattatc atgagctaat tttataattc agaaaattat
     4261 gaattaatta acttttaaaa taaccaattc atgtatattt tattctaatc atttgtcaca
     4321 gacacaattc ctactttaag gttgactttc tctctgtgaa tgtcttcata aagttaggtg
     4381 tggattttga agaacagata ttaacgatta ttactatgct agacaacaaa ttatgaaata
     4441 taacattgaa tgctgtcgtc tggtgtgtct gtaaggacag aaataactaa gatacacata
     4501 acttttgcaa actttcaagc tgtgtaatat tccaatgttg ttttttcttt gtagatatac
     4561 ttaaatcacg taggatgttg taaactcagt atgatcatgt ctagtcctca aacttaaaat
     4621 aaacttttga aaaaccgtg
//
