LOCUS       XM_006257052            7612 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ectodysplasin A2 receptor (Eda2r),
            transcript variant X6, mRNA.
ACCESSION   XM_006257052
VERSION     XM_006257052.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006257052.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7612
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7612
                     /gene="Eda2r"
                     /gene_synonym="RGD1564025"
                     /note="ectodysplasin A2 receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 9 long SRA reads, 7 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 34 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:296872"
                     /db_xref="RGD:1564025"
     CDS             243..1139
                     /gene="Eda2r"
                     /gene_synonym="RGD1564025"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily
                     member 27 isoform X4"
                     /protein_id="XP_006257114.1"
                     /db_xref="GeneID:296872"
                     /db_xref="RGD:1564025"
                     /translation="MMDCQENEYRDQWGRCVTCQQCGPGQELSKDCGYGEGGDAYCIA
                     CPPRKYKSTWGHHRCQTCITCAVINRVQKANCTNTSNAICGDCLPRFYRKTRIGGLQD
                     QECIPCTKQTPSSEVQCTFQLSLVKVDTHTLPPKEATLVALVGSLLVVFALAFLGLFF
                     LYCKQIFNRHCQCGGSLQYEAEKAVQEDSLLTTPPGQETSPEFPANGSIFEIKPLNSI
                     LDDDCSSTRGFPTQESFTMASCASESHSQWVHTPIECTELDLQKFSSSVPCPGAETLR
                     ENTAEHSGDRLDLYVPFEVPSL"
ORIGIN      
        1 aggggagaga agggggatag gcataacatg aaagaaatag aggatggatt tgatctgttg
       61 ttgccacacg tggaagtgaa atgactccag cagaacactg gttgcaacgg attccaccta
      121 ttgtgagaac gtgacaactg ccttgaaaaa gaacagatat ttctgcctac ctcagatgga
      181 ccatcacctc ttgctgtgtg cactggaata aaagacaaag taaaccattt tttttttttt
      241 tcatgatgga ttgtcaagaa aatgagtacc gggaccaatg ggggcgctgt gtcacctgcc
      301 aacaatgtgg ccctggacag gagctctcta aggattgtgg ttatggagaa ggtggagatg
      361 cgtactgcat agcctgccct cctcgaaagt ataaaagcac ttggggacat cacagatgtc
      421 agacatgcat cacttgtgct gtcatcaatc gggtccagaa ggccaactgc acaaatacct
      481 ctaatgctat ctgtggagac tgtctgccca ggttctaccg aaagacacgc attgggggcc
      541 tgcaggacca agaatgcatc ccgtgtacaa agcagactcc ttcttctgag gttcagtgta
      601 ccttccagct gagcttagtg aaggtagaca cacacactct tcctcctaag gaagccacac
      661 ttgtcgcact ggtaggaagt ctgctagtgg tctttgccct ggccttcctt ggactcttct
      721 tcctttattg caagcaaata ttcaacagac attgtcagtg tggaggttca ttgcaatatg
      781 aggctgaaaa ggcagtgcag gaggattctc ttttaaccac accacctggc caggagacca
      841 gtcctgagtt tccagcaaat gggagcatct ttgagatcaa gccccttaac tccatcctgg
      901 atgatgactg cagctccact cgcggcttcc ccactcagga atccttcacc atggcttcct
      961 gcgcctcaga gagccattct cagtgggtcc atacccccat tgaatgtaca gagctggacc
     1021 tgcaaaagtt ttccagctct gtcccctgtc ctggagctga aaccttgaga gagaacacag
     1081 ctgaacactc aggagacagg ctggacctct atgtaccttt tgaagttccc agcctttaac
     1141 tctaccaagg tgagctgaaa agatagggct aaaggtccag aaggtgtggg ccaccctcag
     1201 gaaatttcca aaccgggttc tattgttcca taaggtttgg atggaagaac atcaggaaac
     1261 caggttggag aggcaacagt tggggcacta aattttgagc taagtttaca ttggacttct
     1321 aggacaattg tctgcaaacc aggcaggatg acatgaggcc aatttcagat cccactatca
     1381 actaatcata ttcaggtttc tccttttgtg tgtacaagta gaacaacgct gtaaaggtac
     1441 gcagctccat attctgagaa atatcaattc ctgaatagct ttctgaactt gtgcaaatca
     1501 ttttacttct ttcagacaca gagccttcca ctcatacgtt ttcttgagga ttgattgaaa
     1561 gcatatgcaa gtgcccttta tagtgtctgc atgttaggcc cttttttttc tttacccgtg
     1621 catagtcaca aattagaaat cccttttata ttggttacat ttgattctga acttcataat
     1681 gtcatccctc tgttgtagac aaataagaaa tacgttaacc tcattttaag aaacaggaat
     1741 caagcaacag agatgaaacg agatttgctt aaaatcacag aacaacccaa tctcagaaat
     1801 aaacgagaac ccaggattag cagtcccatt atagaactcg ttcaacttca tcactgaata
     1861 tgaatatata tgtatatatc tcaatatatg tctcataaca tatatgtgtg catgtgtata
     1921 tgtatacata cacacacaca aaaaaatata tatacacaca cacatatatg gtgaaatatc
     1981 tttgaggaaa gaagaacaca tatagagcct gaaatagtta taaatttttg aaaatttttg
     2041 ggactttgaa tttttcaatt ttggattaag gattctcaat ctatttcttc atttaaaaac
     2101 tatgcagttc tttttcatat gttgcagtga acaggagctc acaactgtaa aaagaataat
     2161 tgtatctcat actcatttat gggttctggt tttattctga ttcctctgcc ttctgagaaa
     2221 actgaagaca acatctgtct ggaaaatacc acttttttgt gtggtttttt gtttgtttgt
     2281 ttgtttgttt ttaatcatgg tgcttataac gtaatccaat tttttttaaa aacttactag
     2341 tttgtaatac tatagatttg tcatctctgt agctggatga ggtatttctg ctattacatg
     2401 ttaatcttta ctggtctatc cattaacctt tagagaaaag gaagaggagg gtgatgagtt
     2461 tgtatcgtag gattctaact tgtctgctct ctttctaggt ctctttcact cttgacaagc
     2521 ttgccagtgc ttgttgctgg gctttcctgc tcctctttta ttcaacaaca gtagcaggag
     2581 cctgggatgt aggtcctgca ataaccagca ctcgaaatgg ggtatacaga gccccacact
     2641 acgagaggat tgattcccca atgactgact ttgaacactt tttgttttct tattctagtc
     2701 tggggatcca gattccgtag ccatgggact actgggtctg ttctttctct ttaattaatt
     2761 atagaaatga gggggataac aatgagtgag gtagagttct cctgcctgta tgtttcctgc
     2821 ctatattttt taacaagttg atttacaaaa aggagtacac agaactatgt tggcatttac
     2881 ctaccacctt gaagagaaaa atgaaatact tcccccttta gccttctgtt ttgactcgct
     2941 ccctccccta tacacacaca cacacacaca cacacacaca cacacacaca cacacacaca
     3001 cacacacaaa catgtacaca gaatgagggg ataatgagga agatatcaag gacaggcctg
     3061 aagcctgggt tttacaaatc atatcctaga cttctacagc tatgacactg tccagccagt
     3121 atatttctta gacctttcat tctcagagac aggctatcaa tactctctag tggggataca
     3181 aattagtgtc tcctagattt tttttagatt gttgtttcct taacttcttt tcatttttat
     3241 tactacaata ttcttacctt ttcccccttc atagtcaggt gctgactgtg aagtttctca
     3301 ggtgcaggag tagtgccctg tggaactgcg gggaccattt ggtgctttct tggcttagag
     3361 aatagtcttt ctatttctct taagcctaaa cctccagttt tacatgcttc tcagcatgaa
     3421 ttgaaacctt tttcttcctt ttttttcttt ttgtggaaca tgtcagatgt gatcctaagg
     3481 acttagatgt gactatcccg tattggcttt acttatgcct gcatgttcaa agtgagccac
     3541 taggattgat gcctagtccc tcatcgtggt tcaggtttca atgggaaaaa gtccttaaat
     3601 gagtaaagca actggatctt gggagttata tatactatcc tgaatgctgg tgtgatttag
     3661 cttattaaaa aacaaattga agacacacac agttattgtg ggtcaaagat gtaaagatgc
     3721 actaaagctg tccgtgctgc actttgcatt attcacatta tagatgtcct ctccatgact
     3781 cagtgcacaa actttgatat aggtagtgca ggggttgctc agtgcagtag gagtgcatag
     3841 aaaggcttga atggttttag tcatttttcc tcatttgaca ctgccgactc ttaaaaggta
     3901 gaagcgcagg gcatgtattc ttctcatatc aaggtagcag aagcagaagt aatggaattt
     3961 ggaagcaaac tgcccttgca ttgtaagact ctcagaaaca caagggatag ggatttagat
     4021 agtgttggag tacttgcatt tagcatgatc aaggtattat atccatccta gcattgcaaa
     4081 ataaagagat gggtggatga ggggggaaaa gaaaggaagt aaagaagaaa ataaaacatt
     4141 tccaccacca agaaatgtac cagattccat aattggctaa gtgctactga ggctgtcgtg
     4201 gagttttcca ttggaaaata tcacacgagg tcatcttata ttaaaaggtt tttcttgcct
     4261 ttagctctta aacactgctt ataataattt tctgtttgtt tcttgattcc ctagactcat
     4321 agcactctgt gagtttgctg gaaggtctga tggatgttcg aagagcagtg gttctgagtt
     4381 gtagtgtaac acataaacaa ttttaatatg ggtctcccgg gccttatcta atatttgacg
     4441 ttctttttct ctacccccag cagaaagcca gacaaaagtt tgatctttca ggaccctaca
     4501 gtacattttt gagccaattt ttcctttcct atgtctgggc tccccaagca accgtgcacc
     4561 acgccttcaa agttacccac agcatttttc aagttagcta agtgaggatg tgaagggtcc
     4621 cccaaggtat gggtatttct ttgacatgtc ggttcgatgc atactttatt gtccatttgg
     4681 ttctttttga aaattcattt tgcctttagc tcttacctgt acatctcaag agcaaagaaa
     4741 acaggaatct ccttagagat tctattattc ttttttatct ccaagtcttt atgaagcttc
     4801 tcagccagtt tctatcctat aagtgattgg tgggttatgt aaaatgtgga cttcatcacg
     4861 gggacttatc cttaacagag agtattctcc acaagattct gttaagtgta tctttaataa
     4921 cggctcatcc acaaacactg attaagggcc ttaaggtcaa accactgata agtattaaaa
     4981 gcacaaaatt acaaaatgct aaaaggtccc attgtacttg gcaggggatt agaagcaatt
     5041 gaatcacaag tctgtaccag gcaacctggt ctcatgcaag cattagcaaa tatgtgtgag
     5101 ccaaggttta gaccttggtc tttgggctct ctgtactttt ttctgggaca gtttatgctt
     5161 atctcaccaa ctttaattag tcatatctat acttgggtgg agaagaacta gcacccaatc
     5221 tgaggtggat tcagcttaag taggttccag ctgcagaaag gtcaccgtgt gcctggcact
     5281 gcttcaaact ccagtacacc accgcttctc agtgaaaagg actgtgatga tacgacagca
     5341 aaaacaaagt gattaaatga cctaggcacc ctgcttcact gtgcctatac atagcaaggt
     5401 cattctacat tcatactgag aatggctttg cttccagttt tcttgaattg accagtttga
     5461 gttggtaatt caaggaaggt gaacttttgc tttgctttgc tttctatggc atcttgggaa
     5521 taatcaaagt gaagactggt tttctttttt ctttgtaatt ggtatgtggc cttggcttac
     5581 tttacatttg catatttgct caagtagtgt ccttttaaag tggaatcact ttgggtacta
     5641 tgcttttatg tgtcttctat ttgaagatat cttgagaaat atatataaca taactctgag
     5701 cctggacagt agttgtgttt tacatatttg aactagcaac agaaaatatt ttgtttacaa
     5761 gggagaggta ggtatttagt ggaggtgagt caggcttcag ggttcacttt ttcctccact
     5821 taaaaatgtc actggaattt tgaaaggtgg tatgtagtat gagagatcaa ctttcttccc
     5881 taaggtcgtt aatattagat taagtaaaaa tgtcaacact acaccacttt taccaacaca
     5941 tagtcctggc acactgagat gtcaccctca ttcccctcat tcaatttatt gccaaggtct
     6001 ttgatgtttt ttgtttaatg gaggcaggtt ttaattattg ttttccttaa aatgagctat
     6061 ttatagagat tttgttaaat tttgagccat atgcatgagt ggatcctgac aagttgtgtt
     6121 tggtttatga taatctgcaa acaattcata ttaatcaata aacagaagta catccagatg
     6181 ctttgtttat tcctctgctt tcagagaact ggtgtgactc attcagttgt tttgtatgtc
     6241 tgcttagtca gtacagaaag aaatgtgttt ctaatcattg ggtgtagcac cagggctatg
     6301 gcaattccga ctagtcaccc aggagatctg agttatagtc tacattctcc tgctttcaat
     6361 tgtttatgac atttagtatc ttgtctggtt acagacccac cagacatttt tgtattctga
     6421 atgtataatc cttttctttt tctgttgttt tgttttgttt tgagacaagg tttctctgtg
     6481 tgatacagcc ttaggtgtcc tggtctcgat ttgtagacca tgctggctgc aaactcacag
     6541 agatctgtct gactctgact cccaagtgct gggattaaag gtgttgtgct tccactccca
     6601 ggcctaaatt tacaattctt aaggagggtt gtaaagtctt cagactgtgt gcatatgttt
     6661 aaaggtatga accaatctct tgtaatttat atgtgcacat ttccatttga ccatactatt
     6721 ttaagaatag atgcacacat gcatgcatgc ctgcacacat acacacatac atatacaaac
     6781 tagagaatct gtaggattgc ctcttaagaa cattgctttg ccattgtttg atctgtattt
     6841 ttgtttatgg tgttattaga ttcaagggac aacatttgat ttgaaatgtt cttcactact
     6901 ataattttat ttaaaaccag gcaaattaaa tttcttccta tctcaaatgt tggctaatcg
     6961 taatagacat acatactgac gaggatgtga aaaaaaaaga aaattcatac agtgtcggtg
     7021 ggattgtaaa atggcatgac ctttttgaaa cagtctggca gttcttataa aatttaaagc
     7081 ttcagttgac atatggttca ataattctac tcatcaatat atgatgaaga taattaaaaa
     7141 catgaacatt tatactcttt aaaacagtgt ttataataat cagttgttta cagttgcaac
     7201 ccattgtcat caactgattg atgaataaac cagttgtaat aaaacataag atattaaaca
     7261 attaaaataa ttgaagttat gatacttgat atgtcagagt tcaagctcaa atcatactaa
     7321 gttgtcgaat ccaggtacct gaaagcacat cttgtatagt tgcagtcata gtaaatgttt
     7381 acagaatgta agcaaatagt gacagaatgt aaattagtgg tctcttggta ctgagtacaa
     7441 gagaaacaac taatgttagc agtcatatgt gatcttgttt agaagaaaaa ctgttatgat
     7501 gatagttgca attctcagta aatttattaa aaactgctga caggcatact ggaaatgaat
     7561 gaattttatt atataaaaat attcaataaa gctgttaaaa tatatttctt ga
//
