LOCUS       XM_017601091            1190 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus endothelial cell surface expressed
            chemotaxis and apoptosis regulator (Ecscr), transcript variant X1,
            mRNA.
ACCESSION   XM_017601091
VERSION     XM_017601091.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017601091.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017601091.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1190
                     /gene="Ecscr"
                     /note="endothelial cell surface expressed chemotaxis and
                     apoptosis regulator; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 23 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:689248"
                     /db_xref="RGD:1594804"
     CDS             51..785
                     /gene="Ecscr"
                     /codon_start=1
                     /product="endothelial cell-specific chemotaxis regulator
                     isoform X1"
                     /protein_id="XP_017456580.1"
                     /db_xref="GeneID:689248"
                     /db_xref="RGD:1594804"
                     /translation="MDREYTEEPATHPADLGTNGAMRLGSAILSLLLLQGYSSQPTTT
                     QTSQGDRSSSEPGSSGLPLSTITPEILQKSSQASLASSQPVTPRSSTMDRHSLSLPDP
                     MSFQTQRHTPGTGAPESSSSSSRRGESSLDATPSPGTSSLRTKEGTILPTPTSESVLT
                     VAAFGVISFIVILVVVVIVLVSVVSLRFKCRKNKESEDPQKPGSSGLSESCSTANGEK
                     DSITLISMKNINTNNSKGCTSAEKIL"
ORIGIN      
        1 cccccgcccc cgccccgtct caccccagta ctccctctct cttctctact atggacagag
       61 aatacacaga ggagcctgct acacacccag ctgatctggg gaccaacgga gccatgaggc
      121 tgggttcagc aatcctcagt ttactcctgc tccaaggtta cagctctcag cctacgacaa
      181 cgcagacctc tcagggagac agatcttcct cagagcctgg cagctcaggg cttccgctta
      241 gcaccattac cccagaaatt ctacagaagt catctcaggc ctccttggca tccagtcagc
      301 ctgtgacacc aaggtcaagc accatggata gacactctct ttccttgccc gaccccatgt
      361 cgttccagac ccagagacac acacctggca caggggctcc agaaagcagc agcagcagca
      421 gcaggagagg agaatcatct ctggatgcta ctcccagtcc aggaacctcc agccttcgga
      481 caaaagaggg gaccatcctg cctaccccca catcagagtc agtgctaact gtggctgcct
      541 ttggtgtcat cagcttcatt gtcatcctgg tggttgtagt gatcgttctg gtcagtgtgg
      601 tcagcctaag gtttaagtgt cggaagaaca aggagtctga agatccacag aaacccggga
      661 gttcagggct atctgaaagc tgctccacag ccaatggaga aaaagacagc atcacactca
      721 tctccatgaa gaatatcaac acgaacaaca gcaaaggctg cacctcagca gaaaagattc
      781 tttaaaagtg acctggagtg gcgatgtgtc cacgaatgat tcagtgtcca gtggccataa
      841 ggaagaagag acgagaagag actggtgaag gcagcagacc acacataaat tattttattt
      901 cacgcctgct cccagctcta aaggatagga aattcctcta gatccagaag caacctacca
      961 caggagagac tcccttccat ttggaagcca cgctggacat tcaacctcct cctcctcctc
     1021 ctcctcctcc tcctcctcct cctcctcctc ctcctcctcc tccaaccccc cctcctcctc
     1081 ctgctcctcc tcagaaactc agggatgagg aggcaatgga gcaggactta aggaagcaat
     1141 gaggtagact gtccatgcta ctcgaattaa agttattttc tggcctggaa
//
