LOCUS       NM_001009275            1219 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus enoyl-Coenzyme A delta isomerase 3 (Eci3), mRNA.
ACCESSION   NM_001009275 XM_214465
VERSION     NM_001009275.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   van Weeghel,M., Ofman,R., Argmann,C.A., Ruiter,J.P., Claessen,N.,
            Oussoren,S.V., Wanders,R.J., Aten,J. and Houten,S.M.
  TITLE     Identification and characterization of Eci3, a murine
            kidney-specific Delta3,Delta2-enoyl-CoA isomerase
  JOURNAL   FASEB J 28 (3), 1365-1374 (2014)
   PUBMED   24344334
  REMARK    GeneRIF: Eci3 specifically evolved in rodents after gene
            duplication of Eci2 and is localized to the peroxisomes
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC088178.1.
            
            On Jan 7, 2005 this sequence version replaced XM_214465.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088178.1, CF110114.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1219
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /note="enoyl-Coenzyme A delta isomerase 3"
                     /db_xref="GeneID:291076"
                     /db_xref="RGD:1310224"
     exon            1..98
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            99..176
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..1031
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /EC_number="5.3.3.8"
                     /codon_start=1
                     /product="enoyl-Coenzyme A delta isomerase 3"
                     /protein_id="NP_001009275.1"
                     /db_xref="GeneID:291076"
                     /db_xref="RGD:1310224"
                     /translation="MHKPGVFDFDNKAKQDARKETAMDLKSSLSSSETSSQGKGGADK
                     KAQESKDILVTSEDGITTITFNRPSKKNAISFQMYKDIMLALKNASTDNSVITVFTGV
                     GDYYSSGNDLRNFINDAGEIQDKVTMCAVLLREFVNTFIDFPKPLVAVVNGPAVGIAV
                     TLLGLFDAVYASDRATFHTPFIHLGQNPEACSSYTFPKMMGSAKAAEMLLFGKKLTAR
                     EAWAQGLVTEVFPESTFETEVWTRLKTYAKLSPNGMRVFKELIRNHERQKLYTVNAEE
                     CAVGQERLKSEEWKDALRNFLSRKAKL"
     exon            177..350
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            351..420
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            421..520
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            521..641
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            642..731
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            732..875
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
     exon            876..1185
                     /gene="Eci3"
                     /gene_synonym="RGD1310224"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgattcca gccattctta agcatctagg ctcatactgt cctcggggtt agctttcgct
       61 tccgtgactg gaagagtggt gcggtgctgg tgtccgaggc cacagaagga ccctgcacta
      121 tgcataaacc aggtgtgttt gactttgaca ataaagccaa gcaggatgca cggaaggaaa
      181 ctgccatgga cctcaaatcc agtttgagtt catctgaaac ctcgagccag ggaaagggtg
      241 gagctgataa aaaagcccag gagtctaagg acatcctggt aacgtctgaa gatggcatca
      301 caacgatcac attcaatcgg ccctccaaaa agaacgccat aagcttccag atgtataagg
      361 atattatgct cgcacttaaa aatgccagca cggataactc agtcataact gttttcacag
      421 gagttggtga ctactacagc agtgggaatg acctaagaaa tttcattaat gatgccggtg
      481 aaatacagga caaggtcaca atgtgtgctg tgctactgag ggaatttgta aacactttta
      541 tagactttcc caagcctctg gttgcagtag tcaatggccc agctgtggga atcgctgtca
      601 cccttctggg actatttgat gccgtctatg catcggacag ggcaacattt catactccgt
      661 tcattcacct tggccagaac ccggaagcct gctcctctta cacatttcca aagatgatgg
      721 gctcagcaaa ggcagctgag atgcttctct ttgggaagaa actcacagca agagaagctt
      781 gggctcaagg tcttgtcact gaagttttcc ctgaaagcac ttttgagaca gaagtctgga
      841 ccaggctgaa aacatatgcg aagctttcac caaatggaat gagagttttc aaagagttaa
      901 tcagaaacca cgagagacaa aagctatata ctgttaatgc tgaagaatgt gctgtgggcc
      961 aggaaaggct gaagtcagag gagtggaagg atgcactcag aaacttcttg tccagaaagg
     1021 caaagctgtg aagaccctga gagcagctag acttctcagg ggaaggatgc gctgtgagtt
     1081 ccagtttcaa gtgcctgaac tacacaaact cctctgtgcc ccttttgatt accagttatg
     1141 atgagtgtgc ttcagttata aacaataaaa acttccataa aaccaaaaaa aaaaaaaaaa
     1201 aaaaaaaaaa aaaaaaaaa
//
