LOCUS       XM_039095484            1933 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus enoyl-CoA delta isomerase 2 (Eci2),
            transcript variant X4, mRNA.
ACCESSION   XM_039095484
VERSION     XM_039095484.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095484.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1933
                     /gene="Eci2"
                     /gene_synonym="Peci"
                     /note="enoyl-CoA delta isomerase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 26 ESTs, 3 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 168 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:291075"
                     /db_xref="RGD:1359427"
     CDS             487..1563
                     /gene="Eci2"
                     /gene_synonym="Peci"
                     /codon_start=1
                     /product="enoyl-CoA delta isomerase 2 isoform X1"
                     /protein_id="XP_038951412.1"
                     /db_xref="GeneID:291075"
                     /db_xref="RGD:1359427"
                     /translation="MRATQQDFENAMNQVKLLKKDPGNEVKLRLYALYKQATEGPCTM
                     PKPGVFDFVNKAKWDAWNALGSLPKETARQNYVDLVSSLSSSSEASSQGKGGADGKAQ
                     ESKGILVTSEGGITKITFNRPSKKNAITFQMYQDIILALKNASTDDTVITVFTGAGDY
                     YSSGNDLTNFTSASGGMEEAANKGAIVLREFVNTFIDFPKPLVAVVNGPAVGISVTLL
                     GLFDAVYASDRATFHTPFSHLGQSPEACSSYTFPKMMGSAKAAEMLLFGKKLTAREAW
                     AQGLVTEVFPESTFETEVWTRLKTYAKLPPNSMRISKELIRKNEKEKLHAVNEEECTT
                     LRARWLSEECINAIMSFVTRKPKL"
ORIGIN      
        1 aatggtcggg tttctaaatg aatatgttta gactctccga ttaaaattcc cagagcacag
       61 tgatccgcct ccgtaccctg accctcctgc gccagatctt gctccagtca cctatgtaca
      121 cagttggacc tggaccaggc atactaggct cctcctcgaa acccgcccat tctcaactct
      181 gaaggagctg ccagtcacac ccctgcccca ggctctcttc caagttctgc tccgcccgcc
      241 tatttgtccc agggtcggct cacggccgga gctcacatcc tggctccgcc ctcagccccg
      301 ggctccgccc acgcccggag cgcacctctg gctccgcccc ctcacagttt cagctgggcc
      361 taagcctccg agctcagttt gacctcagca tccagctatg gcggcagtga cctggagtcg
      421 ggcgcggtgc tggtgtccga ggtcctcaga ttaccagtga ctaaactgca cctaggcaga
      481 ccagccatga gagccactca gcaggacttc gaaaatgcaa tgaaccaggt gaaactcttg
      541 aagaaggacc caggaaatga agtgaagctg agactgtatg cgctgtataa gcaggccaca
      601 gaaggaccct gcactatgcc taaaccaggt gtgtttgact ttgtcaataa agccaagtgg
      661 gatgcatgga atgctctggg cagcctacca aaggaaactg ccaggcagaa ctatgtggac
      721 ctcgtatcca gtttgagttc ctcatctgaa gcctcgagcc agggaaaggg tggagctgat
      781 gggaaagccc aggagtccaa gggcatcctg gtaacgtctg aaggtggcat cacaaagatc
      841 acgttcaatc ggccctccaa aaagaacgcc ataaccttcc agatgtatca ggatattata
      901 ctcgcgctta agaatgccag cacggatgac acagtcatca ccgttttcac aggagctggt
      961 gactactaca gcagtgggaa tgacctgact aacttcacta gcgcctctgg gggaatggag
     1021 gaggcggcta acaagggtgc tatagtactg agggaatttg taaacacttt tatagacttt
     1081 cccaagcctc tggttgcagt agtcaatggc ccagctgtgg gaatctctgt cacccttctg
     1141 ggactatttg atgccgtcta tgcatcggac agggcaacat ttcatactcc attcagccac
     1201 ctcggccaga gcccggaagc ctgctcctct tacacgtttc cgaagatgat gggctcagca
     1261 aaggcagctg agatgcttct ctttgggaag aagctcacag caagagaggc ttgggctcaa
     1321 ggccttgtca ctgaagtttt ccctgaaagc acttttgaga cagaagtctg gaccaggctg
     1381 aaaacatatg cgaagctccc gccaaactcc atgagaattt ccaaagagtt aatcaggaag
     1441 aatgagaaag aaaagctcca tgcagttaac gaggaggagt gcactacttt acgagcaagg
     1501 tggctgtcag aggagtgcat caacgcaatc atgagctttg ttaccagaaa gccaaagctg
     1561 tgaagtccac gacaatggca agactcctca caagaaggac agactgtgag ttccagttcc
     1621 aaggacttga atggcacata cttctctgag ccttttcctg gattaactta gcaactatga
     1681 tgagattgct tcacagcact gataaataga acttttcata aatcaagcct taagaattca
     1741 tgtctggggc tggaaagatg gctcagtggt taagagcact aactgctctt ctagaggtcc
     1801 agagttcaaa tcccagcaac cacatggtgg ctcgcaacca tctgtaatga gatctgatgc
     1861 cttcttctgg tgtgtctgaa gacagctaca gtgtacttac atataataaa tattaaaaag
     1921 attttaaaca aaa
//
