LOCUS       NM_001101010            1483 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus enoyl CoA hydratase domain containing 3 (Echdc3),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001101010 XM_001070886
VERSION     NM_001101010.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Baker-Malcolm,J.F., Lantz,M., Anderson,V.E. and Thorpe,C.
  TITLE     Novel inactivation of enoyl-CoA hydratase via beta-elimination of
            5, 6-dichloro-7,7,7-trifluoro-4-thia-5-heptenoyl-CoA
  JOURNAL   Biochemistry 39 (39), 12007-12018 (2000)
   PUBMED   11009615
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001101010.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC101897.1, FQ219501.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-219               JAXUCZ010000017.1  76980112-76980330
            220-341             JAXUCZ010000017.1  76985197-76985318
            342-439             JAXUCZ010000017.1  76988329-76988426
            440-640             JAXUCZ010000017.1  76996192-76996392
            641-1483            JAXUCZ010000017.1  77002092-77002934
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.3"
     gene            1..1483
                     /gene="Echdc3"
                     /note="enoyl CoA hydratase domain containing 3"
                     /db_xref="GeneID:684538"
                     /db_xref="RGD:1589147"
     exon            1..219
                     /gene="Echdc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..952
                     /gene="Echdc3"
                     /note="enoyl-CoA hydratase domain-containing protein 3,
                     mitochondrial; enoyl Coenzyme A hydratase domain
                     containing 3"
                     /codon_start=1
                     /product="enoyl-CoA hydratase domain-containing protein 3,
                     mitochondrial precursor"
                     /protein_id="NP_001094480.2"
                     /db_xref="GeneID:684538"
                     /db_xref="RGD:1589147"
                     /translation="MALVAGLRAFGAKWPSWLRRSPWAPLSAGFCSPGSARPAGPESE
                     PRLTSTRQQDGIRNIVLSNPRRRNVLSLAMLKSLRSDILHEAESEDLKVIIISAEGPV
                     FSSGHDLKELTGAQGRDYHTEVFQTCSEVMMLIQNHPVPIIAMVNGLATAAGCQLVAS
                     CDIAVASDKSSFATPGVNVGLFCSTPAVALGRAVPRKVALEMLFTGEPISAQEALRHG
                     LISKVVPEEQLEEEATRIAKKIASLSRSVVALGKATFYKQLPQDLSTAYFLASQAMVD
                     NLTLKDGQEGIEAFIQKRRPVWSH"
     exon            220..341
                     /gene="Echdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            342..439
                     /gene="Echdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            440..640
                     /gene="Echdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            641..1483
                     /gene="Echdc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccaggccta ggcagcttgc gccgccgacc ttgctatttc ttggctgcga tggccttggt
       61 cgccggcctg cgggcctttg gggcgaagtg gcccagctgg ctcaggcgca gcccatgggc
      121 ccctctctcc gccggcttct gcagcccggg gtcagcaaga cccgcggggc cggagtcaga
      181 gccaaggctc accagcacgc gacagcagga cggaatcagg aacattgtct taagcaaccc
      241 caggaggagg aatgtgttgt cactggccat gctgaaatct ctccgaagtg acattcttca
      301 cgaagctgaa agcgaagacc tgaaagtcat tataatttca gccgagggcc ctgtgttttc
      361 atctggacat gatttgaagg agctgacagg tgcgcaaggc cgtgattatc acactgaggt
      421 atttcagacc tgttctgagg tcatgatgct gatccagaac cacccggtcc ccatcattgc
      481 catggtcaat ggcttggcca cagctgccgg ctgtcagctg gttgccagct gtgatattgc
      541 tgtggccagt gacaagtctt cttttgctac gcctggggtg aacgttggac ttttctgctc
      601 taccccagcg gttgccctgg ggagagccgt gcccagaaag gtggccctgg agatgctctt
      661 tactggggag cccatttccg ctcaggaggc cttgcgccat ggcctcatca gcaaagtggt
      721 cccagaggag cagctggagg aagaggccac tagaatagca aagaagattg cctctttgag
      781 ccgctcggtg gtggcgctgg gcaaggctac cttttacaaa cagctgccac aagaccttag
      841 cacagcctac ttcctcgcct cccaggctat ggtagacaac ctcaccctga aagatgggca
      901 ggaaggaatt gaagccttca tccagaagag aagacccgtc tggtcccact gagccagcat
      961 gaggagtgct gagttaatgg tcagctctag gaagccccct gccctcccgt cttctcttgc
     1021 cccagccaca ctgccgcctc ctggttgtgg gagagcaaag ccacctttct aacttggatg
     1081 ttggtttccc agtgtgtgat ctgtattaaa ggccatggtt ctgtgggaaa cagataacgg
     1141 cggagggaac gacttgctag gtcagtggcc aggttaatgt gcacaggggt gtgcgggccc
     1201 tgacagaaac cccagaacct gaagtgagga gctgccccta caggtgacag tgaagtgagg
     1261 catgaaggaa gggtgccaca ctccccacct ccccaccccc cacccccgct cttctgtagt
     1321 ttcctacaga cagtccgttc cagttgctcg tggcaagttg aacatttcca atctccatga
     1381 gatcatctcc acactgaaaa tcttcttgat tctaccagga aatcatcacg cctgtggctt
     1441 tggattaatc ttatgtgatt tgaataaatt gaatatttat aga
//
