LOCUS       NM_001106675            1390 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus enoyl CoA hydratase domain containing 2 (Echdc2),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001106675 XM_001059951 XM_216479
VERSION     NM_001106675.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474008.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001059951.1, XM_216479.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132292,
                              SAMD00132293 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q34"
     gene            1..1390
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /note="enoyl CoA hydratase domain containing 2"
                     /db_xref="GeneID:298381"
                     /db_xref="RGD:1308525"
     exon            1..190
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..948
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /note="enoyl Coenzyme A hydratase domain containing 2"
                     /codon_start=1
                     /product="enoyl-CoA hydratase domain-containing protein 2,
                     mitochondrial"
                     /protein_id="NP_001100145.1"
                     /db_xref="GeneID:298381"
                     /db_xref="RGD:1308525"
                     /translation="MLRALPRALRLRRPWMSPGARGCAAHASTRTPEIQVQALTGPNQ
                     GITEILMNRPHARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKE
                     RERMSAAEVGTFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRIAASSA
                     VMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGVQAHELGLVNHAVAQN
                     EEGDAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEVDIASGMAIEHMCYAQNIPTQ
                     DRLEGMAAFREKRPPKFVGK"
     exon            191..258
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            259..346
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            347..433
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            434..526
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            527..583
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            584..771
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            772..822
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            823..870
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
     exon            871..1390
                     /gene="Echdc2"
                     /gene_synonym="RGD1308525"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacttcgat tttcagcgaa ggaggtcgcg gttctctgcg ccacccagag ctctccgatg
       61 ctacgtgccc tgccccgcgc gctgcgcctc cggcgcccct ggatgtcccc gggggcccgc
      121 ggctgcgctg cccacgcgtc gaccaggaca cccgaaatcc aagtgcaggc gctgacaggt
      181 cccaaccaag gaatcactga gattctgatg aacagacctc atgcccgaaa tgccttgggg
      241 aatgtctttg tcagcgagtt gctggaagct ctggcccagc ttcgggaaga ccagcaagtc
      301 cgagtcctgc tcttcagaag tgcagtgaag ggcgtgttct gtgcaggtgc agacctgaag
      361 gaacgggagc ggatgagtgc agcggaggtg gggacctttg tccagcggct ccgaggcctg
      421 atgagtgaga tcgcagcctt cccggcaccc accattgcgg ccatggatgg gtttgcctta
      481 ggtggcggct tggagcttgc cctcgcctgt gacctccgca tagcagcttc ctccgctgtc
      541 atggggctaa ttgagaccac tcgaggactt ctcccaggag ccggagggac tcagaggctg
      601 ccccgctgcc tgggcgtggc cctagcgaag gagctcatct tcacaggccg gagactgaat
      661 ggggtacaag cccatgagtt gggcctggta aatcatgctg tggctcagaa tgaggagggt
      721 gatgctgcct accacagggc actggcactg gcacaggaga tcctgcccca ggctcccatt
      781 gctgtgcgcc tgggcaaagt tgccatcgac agaggaatgg aggtggacat cgcatcaggg
      841 atggccattg aacatatgtg ctatgcccag aacatcccaa cccaggaccg gctggaaggg
      901 atggcagcct tcagggagaa acgacctccc aaatttgtgg gcaagtaacc cagctacctt
      961 taagcacaca ccataaagga tccagaggag aagtttgcag caggctcttc agtttcttca
     1021 caagaacact gtgattggca tggtacctag aaccaaggtg ctgaccatga taaccactgc
     1081 cactttccat attgctcacc ttggctagtc actgggatcc agggctgcct ggttctctac
     1141 actcaagcaa attttgggtc tgtgtcattg gctctgatca ctgtggatgg aacagtgaag
     1201 gtcgccttca tttcctctca cagaataaat ccagccaggt ttatctgact tagtgtccgg
     1261 agccggattc cagctctctg tagatgactc agggaattct ggacaaacca tttaacctct
     1321 cagcttttat atctggaaat tatcatttgt gatgataatc cctgtgttaa ataaacaggc
     1381 tgcaactgtt
//
