LOCUS       XM_006256699            1094 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EBP, cholestenol delta-isomerase
            (Ebp), transcript variant X1, mRNA.
ACCESSION   XM_006256699
VERSION     XM_006256699.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256699.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256699.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1094
                     /gene="Ebp"
                     /note="EBP, cholestenol delta-isomerase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 16 ESTs, 3 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 194 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:117278"
                     /db_xref="RGD:620957"
     CDS             142..834
                     /gene="Ebp"
                     /codon_start=1
                     /product="3-beta-hydroxysteroid-Delta(8),
                     Delta(7)-isomerase isoform X1"
                     /protein_id="XP_006256761.1"
                     /db_xref="GeneID:117278"
                     /db_xref="RGD:620957"
                     /translation="MTTNMLPLHPYWPRHLRLDNFVPNDLPTWHILVGLFSFSGVLIV
                     ITWLLSSRVSVVPLGTGRRLALCWFAVCTFIHLVIEGWFSFYHEILLEDQAFLSQLWK
                     EYSKGDSRYILSDGFIVCMESVTACLWGPLSLWVVIAFLRHQPFRFVLQLVVSVGQIY
                     GDVLYFLTELRDGFQHGELGHPLYFWFYFVIMNAIWLVIPGILVFDAIKHLTNAQSML
                     DNKVMKIKSKHN"
ORIGIN      
        1 cttcatcggg cggggaagcg cgagagctga gcggaactgg ggctattagg gagcctgcag
       61 gtcttcctgg aaagtcgcaa gccagtgtta ggaagtcgcc ccgtgatcgc gccgccttgg
      121 ctgccagcag cccatagaaa catgaccacc aatatgctcc ccttacaccc gtactggccc
      181 aggcacctga gactggacaa cttcgtgcct aatgacctcc cgacttggca tatcctggtt
      241 ggcctattct ccttctctgg ggtcctaatt gtgatcacgt ggctgttgtc tagccgagtt
      301 tctgttgtcc cacttggaac tgggcgtcga ctggccctgt gctggtttgc tgtgtgcaca
      361 ttcattcacc ttgtgatcga gggctggttc tctttctacc atgaaatcct tctcgaagac
      421 caagccttct tatcccaact ctggaaagaa tattccaagg gagacagccg atatatcctt
      481 agtgatggct tcatcgtctg tatggagagt gtcacagctt gtctctgggg accactcagc
      541 ctatgggtgg tgatcgcctt tctccgtcat caacccttcc gctttgtcct acagcttgtg
      601 gtgtctgtgg gccagatata tggggatgtg ctgtacttcc tgaccgagct ccgcgatgga
      661 ttccagcatg gagagctagg tcaccccctt tatttctggt tctacttcgt tatcatgaat
      721 gccatatggt tggtgatacc gggcatcctt gtgtttgatg ccatcaagca tctcacaaac
      781 gctcagagca tgctggacaa caaagtcatg aaaattaaga gcaagcataa ctaaagagac
      841 ggagagtgag ctgagacctg tctgaggagg cgctctcccc gcttaccaga agactcgaat
      901 cctcctcctc ctcttcctcc ttctcctcga acagttttgg agggtcagag ctatgggatt
      961 tgccacactc aaagggccag agtcagaaaa ggtagggaac atgcggagct actgccaggg
     1021 accatagaga aagggtggaa gagaagatgg gaagtccctg tccaaaacca ggaaataaaa
     1081 cgtctttaac tata
//
