LOCUS       NM_001009665            1978 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus estrogen receptor binding site associated antigen
            9 (Ebag9), mRNA.
ACCESSION   NM_001009665 XM_216915
VERSION     NM_001009665.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Wicherek,L., Basta,P., Sikora,J., Galazka,K., Rytlewski,K.,
            Grabiec,M., Lazar,A. and Kalinka,J.
  TITLE     RCAS1 decidual immunoreactivity in severe pre-eclampsia: immune
            cell presence and activity
  JOURNAL   Am J Reprod Immunol 58 (4), 358-366 (2007)
   PUBMED   17845206
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Popiela,T.J., Rudnicka-Sosin,L., Dutsch-Wicherek,M., Klimek,M.,
            Basta,P., Galazka,K. and Wicherek,L.
  TITLE     The metallothionein and RCAS1 expression analysis in breast cancer
            and adjacent tissue regarding the immune cells presence and their
            activity
  JOURNAL   Neuro Endocrinol Lett 27 (6), 786-794 (2006)
   PUBMED   17187007
REFERENCE   3  (bases 1 to 1978)
  AUTHORS   Sonoda,K., Miyamoto,S., Hirakawa,T., Yagi,H., Yotsumoto,F.,
            Nakashima,M., Watanabe,T. and Nakano,H.
  TITLE     Clinical significance of RCAS1 as a biomarker of uterine cancer
  JOURNAL   Gynecol Oncol 103 (3), 924-931 (2006)
   PUBMED   16842844
REFERENCE   4  (bases 1 to 1978)
  AUTHORS   Moser,K. and White,F.M.
  TITLE     Phosphoproteomic analysis of rat liver by high capacity IMAC and
            LC-MS/MS
  JOURNAL   J Proteome Res 5 (1), 98-104 (2006)
   PUBMED   16396499
REFERENCE   5  (bases 1 to 1978)
  AUTHORS   Wicherek,L., Popiela,T.J., Galazka,K., Dutsch-Wicherek,M.,
            Oplawski,M., Basta,A. and Klimek,M.
  TITLE     Metallothionein and RCAS1 expression in comparison to immunological
            cells activity in endometriosis, endometrial adenocarcinoma and
            endometrium according to menstrual cycle changes
  JOURNAL   Gynecol Oncol 99 (3), 622-630 (2005)
   PUBMED   16112719
REFERENCE   6  (bases 1 to 1978)
  AUTHORS   Akahira,J.I., Aoki,M., Suzuki,T., Moriya,T., Niikura,H., Ito,K.,
            Inoue,S., Okamura,K., Sasano,H. and Yaegashi,N.
  TITLE     Expression of EBAG9/RCAS1 is associated with advanced disease in
            human epithelial ovarian cancer
  JOURNAL   Br J Cancer 90 (11), 2197-2202 (2004)
   PUBMED   15164121
REFERENCE   7  (bases 1 to 1978)
  AUTHORS   Takahashi,S., Urano,T., Tsuchiya,F., Fujimura,T., Kitamura,T.,
            Ouchi,Y., Muramatsu,M. and Inoue,S.
  TITLE     EBAG9/RCAS1 expression and its prognostic significance in prostatic
            cancer
  JOURNAL   Int J Cancer 106 (3), 310-315 (2003)
   PUBMED   12845666
REFERENCE   8  (bases 1 to 1978)
  AUTHORS   Tsuneizumi,M., Nagai,H., Harada,H., Kazui,T. and Emi,M.
  TITLE     A highly polymorphic CA repeat marker at the EBAG9/RCAS1 locus on
            8q23 that detected frequent multiplication in breast cancer
  JOURNAL   Ann Hum Biol 29 (4), 457-460 (2002)
   PUBMED   12160478
REFERENCE   9  (bases 1 to 1978)
  AUTHORS   Rousseau,J., Tetu,B., Caron,D., Malenfant,P., Cattaruzzi,P.,
            Audette,M., Doillon,C., Tremblay,J.P. and Guerette,B.
  TITLE     RCAS1 is associated with ductal breast cancer progression
  JOURNAL   Biochem Biophys Res Commun 293 (5), 1544-1549 (2002)
   PUBMED   12054692
REFERENCE   10 (bases 1 to 1978)
  AUTHORS   Suzuki,T., Inoue,S., Kawabata,W., Akahira,J., Moriya,T.,
            Tsuchiya,F., Ogawa,S., Muramatsu,M. and Sasano,H.
  TITLE     EBAG9/RCAS1 in human breast carcinoma: a possible factor in
            endocrine-immune interactions
  JOURNAL   Br J Cancer 85 (11), 1731-1737 (2001)
   PUBMED   11742495
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087093.1.
            
            On Jan 13, 2005 this sequence version replaced XM_216915.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087093.1, SRR8487231.85055.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132292, SAMD00132293
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q31"
     gene            1..1978
                     /gene="Ebag9"
                     /note="estrogen receptor binding site associated antigen
                     9"
                     /db_xref="GeneID:299864"
                     /db_xref="RGD:1307293"
     exon            1..195
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     exon            196..293
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     CDS             211..852
                     /gene="Ebag9"
                     /note="estrogen receptor-binding fragment-associated gene
                     9 protein"
                     /codon_start=1
                     /product="receptor-binding cancer antigen expressed on
                     SiSo cells"
                     /protein_id="NP_001009665.1"
                     /db_xref="GeneID:299864"
                     /db_xref="RGD:1307293"
                     /translation="MAITQFRLFKVCTCLATVLSFLKRLICRSGRGRKLSGDQITLPT
                     TVDYSSVPKQTDVEEWTSWDEDAPTSVKIEGGTGNAAAQQNSLEQLEPDYFKDMTPTI
                     RKTQKIVIKKREPLSFGVPDGSTGFSSRLAATQDMPFIHQSSELGDLDTWQENSNAWE
                     EEEDAAWQAEEVLRQQKIADREKRAAEQQRKKMEKEAQRLLKKEQNKMGVKLS"
     exon            294..372
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     exon            373..531
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     exon            532..639
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     exon            640..731
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
     exon            732..1925
                     /gene="Ebag9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccatggcgg ctgcgcggcg gcaacggcgg ctgcgacgga gcgcgcgccc ggctttgaat
       61 gagcggagca gggactgagc tggctgagag cgagctcgag gcagacagcg gctgtgcgcg
      121 cacgcgcctc gtgagcgcgc gtggctcgcg gcagctcgga gcctccgccg ggcgggcggg
      181 gagggggagg ggcaggttct ggttttcacc atggccatca ctcagtttcg gttatttaaa
      241 gtttgtacct gcctagcaac agtgttgtcg ttcctaaaga gattaatatg cagatctggc
      301 agaggaagga aattaagtgg agaccaaata actttgccca ccacagttga ttattcgtct
      361 gtccctaagc agacagacgt ggaggagtgg acttcctggg atgaagatgc acccacaagt
      421 gtgaagattg aaggagggac tgggaatgca gcagcgcagc agaactcttt ggaacaactg
      481 gagcctgact atttcaagga catgacacca actatacgga aaacgcagaa aattgtcatt
      541 aagaagagag aaccattgag ttttggtgtc ccagatggta gcacaggttt ttccagtaga
      601 ttggcagcta cacaagatat gccttttatt catcagtctt cagaattagg tgacttagat
      661 acatggcaag aaaatagcaa tgcatgggaa gaggaagaag atgcagcctg gcaagcagaa
      721 gaagttctga ggcagcagaa aattgcagac agagagaaga gagcagcaga acaacaaagg
      781 aagaaaatgg agaaggaagc acagcgtctg ctgaagaagg aacaaaacaa aatgggtgtg
      841 aagctttcct aacacacgcc tcgccgtgcc ccgggccagc aggagaggtc ggccacagcc
      901 tacacatgag catccctgtg gacgggacag tattctcaga aaacacacac tctgcttgat
      961 ctcagtgtgt ttattgagct attcagaaca ccagaattct cccataatac cttgaactac
     1021 tagtaatcaa gactcaaaac ataaaattaa tgagacaatt attttcttca aagtgttcca
     1081 aatataagac aattgtttgc tgtagagaag ttatttcacg aggaatatac ctgacgagta
     1141 cctctcaagc tagtttttct agctgaataa atgggtgtaa ataattttat ggtggaaaag
     1201 tactctgcta tctattatgc ttttgttcat tgtgcataat tataaaataa ttttaataat
     1261 ctttgtttcc atgatcactt gatgtaaatt agataaactg taggtagggc tttataccct
     1321 tgttaatttt gttttcaggt actgttgaca tacattttct ataatttgaa ctggcattgt
     1381 ttggtacaac attaaggaat attatgattt gggtttttaa gaaaataaca ttaaatgcaa
     1441 taattttatt tatcaaatac tttgtatatc cttattttcc tttgaacagt attataatgt
     1501 tatacagagc tgtaatttat atattgcatg tataaatgtt gaaaatcagc tgcaatgaca
     1561 acttcgtgtg acaagaacta ggattagtag cttttccctt tcattacaga tgtcaagatg
     1621 ttaacagtgt tcatccttaa aagccatttt caaatgcaga aagccttcag ttttaatgga
     1681 tgttttaagt gattctttaa aatttctctg ttttgttttt gttttgtttt taatcttaca
     1741 taatataatg cagggtaccc attctttcag ctagataaca ttactgattg attacaaacc
     1801 aagatataca tatttttgtt tgtgatactg gttgatttgt ttaaagaaat aattgcatat
     1861 tgtattttat ggggaaaaac aacatctcac agtttaaaat acattaaatt tttccaccat
     1921 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
