LOCUS       XM_039088053             764 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ELL associated factor 2 (Eaf2),
            transcript variant X1, mRNA.
ACCESSION   XM_039088053
VERSION     XM_039088053.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039088053.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..764
                     /gene="Eaf2"
                     /gene_synonym="Traits"
                     /note="ELL associated factor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 16 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:266787"
                     /db_xref="RGD:628879"
     CDS             176..574
                     /gene="Eaf2"
                     /gene_synonym="Traits"
                     /codon_start=1
                     /product="ELL-associated factor 2 isoform X1"
                     /protein_id="XP_038943981.1"
                     /db_xref="GeneID:266787"
                     /db_xref="RGD:628879"
                     /translation="MWNPPRTSNLVQHSPSEDKLSPTSLMDDIERELKAEASLMDQMS
                     SCDSSSDSRSSSSSSSEDSSSDSEDDDRSSPSGPRRYSSEHPSVSAGPQYRTSDADTT
                     CNRLYDNSALLMSTLRSDLQLSESDSDSED"
ORIGIN      
        1 ccgcgctgtg ctttccacac cgtgcgctat gacttcaaac ctgcttctgt tgatgcctct
       61 tgtgaaggaa atcttgaggt tggcaaaggt gaacaggtga caataactct tccaaatata
      121 gaaaggagaa ggaagtagca aaatccagtg cagactagaa caacagcaac aacaaatgtg
      181 gaatccaccc aggacatcca accttgtaca gcattctcca tcagaagata agctgtcccc
      241 aacgtctcta atggatgata ttgaaagaga gctgaaggcg gaagctagtc ttatggacca
      301 gatgagtagt tgtgatagtt catccgattc cagaagttct tcatcttcaa gtagtgagga
      361 cagttctagt gattccgaag atgatgaccg atcctctcct tccggtccaa ggaggtacag
      421 ctcagagcac cccagcgtat ctgctgggcc acagtacagg acttcagatg ctgacactac
      481 ttgtaacaga ctttatgaca acagtgccct tctgatgagt actttacgaa gtgatctgca
      541 gctgagtgag tcagacagcg acagtgagga ctgaagcaat atcaagccat aaggaaaaca
      601 cttgctgcaa agcttctagg gaagcttggg gggaaaaaag aaaaagaaaa catttgtaag
      661 atgtttgaga atctgttttg tattgagaat aaatattcct atgttcattg aaaatatgca
      721 acttttgctg ataaaataaa gttggttcag ggttttcaac tctt
//
