LOCUS       NM_001107293            4853 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus ELL associated factor 1 (Eaf1), mRNA.
ACCESSION   NM_001107293 XM_001061899 XM_224618
VERSION     NM_001107293.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4853)
  AUTHORS   Luo Z, Lin C and Shilatifard A.
  TITLE     The super elongation complex (SEC) family in transcriptional
            control
  JOURNAL   Nat Rev Mol Cell Biol 13 (9), 543-547 (2012)
   PUBMED   22895430
  REMARK    Review article
REFERENCE   2  (bases 1 to 4853)
  AUTHORS   Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson
            J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP,
            Eissenberg JC and Shilatifard A.
  TITLE     The little elongation complex regulates small nuclear RNA
            transcription
  JOURNAL   Mol Cell 44 (6), 954-965 (2011)
   PUBMED   22195968
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474046.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061899.1, XM_224618.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4853
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..4853
                     /gene="Eaf1"
                     /note="ELL associated factor 1"
                     /db_xref="GeneID:306261"
                     /db_xref="RGD:1310057"
     exon            1..999
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             639..1706
                     /gene="Eaf1"
                     /codon_start=1
                     /product="ELL-associated factor 1"
                     /protein_id="NP_001100763.1"
                     /db_xref="GeneID:306261"
                     /db_xref="RGD:1310057"
                     /translation="MALPPLFPLGKRKSRPNTGSAAALLPQSLSRRRVDWFPAPGGRG
                     LGSVRARELCPGSAGLRAARAGIRDCGRVRRAPIWVPGKCKAMNGTANPLLDREEHCL
                     RLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTPPMTV
                     FKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSKIQARMEQQPTRPPQ
                     PSQPPPPPPPMPFRAPTKPPAGPKTSPLKDNPSPEPQLDDIKRELRAEVDIIEQMSSS
                     SGSSSSDSESSSGSDDDDSSSSAGEDNGPASPPQPSHQQPYNSRPTVANGTSRPQGSA
                     QLMNTLRNDLQLSESGSDSDD"
     exon            1000..1094
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1231
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1232..1422
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1423..1659
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1660..4853
                     /gene="Eaf1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagatgaga caagtattat aagaaatagg tttagttagg gcaaagggac gctgccacga
       61 atcgactgag aaaatatgag aaaaaaattc tcatcaacga acagtgcccg taggaaaagt
      121 gacttcaaaa caacggcaac aaccgcccta accgaaagcg ggtagacgat tgccagacaa
      181 acaagggatc gcggtgggtt aaggaggtga cggagctaat acggagtttc cgatcgtacc
      241 cttacactga aggaagcgtc gttggccaag aactgaaatc ctctcaccac aaccatggag
      301 cgaagtaggg ggaaggaccg agtgacgggt ggctgaggtc ctgagaactg tcatctctct
      361 ctggaccctc aggataaata aggccataag ggtctccggc atgttcaggg acatccatac
      421 ctacactcag actcgagttc actcagttcc cctagctctg ggctcccgga catcggttca
      481 caggttcacc agcaaaggat aggtcagggc gcactcaccc gtcaggcaag cacaggcgtt
      541 ggggatagaa tcttctagct gaggtgtaaa cctccttaga ctagaccaga aatcgcccag
      601 cactgtgggt tgcggttgtt ccggggaatt ctctctccat ggcactgcct ccgctatttc
      661 cgttggggaa acggaagtcc cgccccaata ccggaagtgc agcggcctta cttcctcaga
      721 gtctctccag acgcagagta gattggtttc ctgccccggg tgggcgcgga cttggttcag
      781 tgcgcgctcg ggagctgtgt cccgggagcg caggcctgcg ggctgctcgc gcgggtatcc
      841 gggactgcgg ccgcgtgagg agagctccga tctgggtgcc aggcaagtgc aaggccatga
      901 acggcacggc gaacccgctg ctggaccgtg aggagcactg cctgcggctc ggggagagct
      961 tcgagaaacg gccgcgggcc tccttccata ccattcgcta tgactttaag ccagcatcca
     1021 tagacacttc ctgtgaagga gagctccagg ttggcaaagg agatgaagtc acaattacac
     1081 tgcctcacat ccctgggtcc actccgccaa tgacggtgtt caaggggaac aaacggcctt
     1141 accagaaaga ctgtgtgctc atcattaacc acgacactgg ggagtatgtg ctggagaagc
     1201 tcagcagcag catccaggtc aagaagacaa gagctgaggg aagcagtaaa atccaagctc
     1261 gaatggaaca gcagcccacc cgtcccccac agccatcaca gccaccccct ccacctccac
     1321 ccatgccttt ccgagccccg accaagcctc cggctggacc caaaacttct cccctgaagg
     1381 acaacccctc acctgagccc cagctggatg acatcaaaag agagctgagg gccgaggtgg
     1441 acatcattga gcagatgagc agcagcagtg ggagcagctc ctccgactcg gagagctcct
     1501 ccggaagtga cgatgacgac agctccagca gcgccgggga ggacaatggc ccagcctctc
     1561 ctccccaacc ttcacaccag cagccctaca acagcaggcc cacagtggcc aatggaacca
     1621 gccggcccca aggaagcgct cagctcatga acacgctcag aaatgacctg cagttaagtg
     1681 agtctggcag tgacagtgat gactagcacc aggctgttga aatctgcttt ctggtgcgca
     1741 aacatgctgc aagacccagc cacttctgcc cggaccgcac gcacgccaca ggaggatgtg
     1801 atcattggcg gtcagagcca taggagttaa ggcctggaag cactcagata ctcagtcttt
     1861 aacttggtgg tggtgggtga ttctcatgta atttttgaac aatctcttga ttcagagttt
     1921 aagtatatct ataggagaac taacagaatt ctgttttatt tggttaacat tgttaatgaa
     1981 aacagaccaa tgtaccctag gacactcaaa gtctgtatct tcataggcca gtaatccagc
     2041 agccctcagt ttggctgggt ggtctctacc agtagaatat aagtctttta agggcatggg
     2101 gaaaaagaga tctcaaattg tgtcatagaa atacattaag accaccttac agtgttgata
     2161 taaagtggta aggaagtttt ttgtgaccta gtttgacaag accatagaaa ttggccttgg
     2221 tggagtcttt gggtcggttg gggtgtgtgt gtgagtatgt gtgtgagcgt gcatgtgagc
     2281 gagcgtgcga gtgtgtgtgt gtgtgtgtgt gtgcgcgcgt gtgtgtgcgc gtgtgtgtgc
     2341 gcgcgcgcgc gcatgtgctg gagattgaat agctcagccc agcacagcta ggaaaaggga
     2401 agcacacagc aggggacagc cagtcacctg ttcctgggca agcttgctca ctacttcctc
     2461 ttttgaacca cacttgctgg tttcatattc ttctgcatgg agcttcctat tggattccac
     2521 agacaaaagc actgctggca ttcaactcgg attcagactc aggcagttcc agcacattgg
     2581 aggcagagtg agcaggtcca ctggcagccg ccatgctgac acacgtcctc agctcagctg
     2641 aggcatttgc tttcacacat ccatccccag gttgttcttc attccaagga tgttagccga
     2701 ggctaggaat cagagggatg tggtgaaaaa gccctgagca gcatatcccg cctccacaga
     2761 tgagaatgca gcgggagtgc tgcagtgtgg aagtctccag aagctctgta tgcttttgtg
     2821 acactgtttg tgcctgactc ccagaagaga atcacaagat tgccttttgc tgtgtgccat
     2881 ttccaaatga atgttcttgc tggaaactgg tccctagtca atgttccaca gtgaggaagt
     2941 atgtggtgac ttgtgtgtcg ctgcccgtct ctgtagtctg aatgagtaga tcctaggaaa
     3001 tcctatcttt gctttaagac attgataatg ctgttctttc cttgggcttc tccactcacc
     3061 ccttcctcta cacgagtgga ggaaggtggt ctggacctaa aaaggaagtg agtggtccac
     3121 ggtggggcct taggtcatat atgtccactg tatggtcagt gcaccatata gatctgctgt
     3181 ttggtccaga gaccgaagtg aactgggatg gagtagaggc cgctgactgg cggccatctg
     3241 cagagcggta cactagtgcc ttgtgctcag tctcagatca ctgggggatg ctcagtggaa
     3301 ccagtggcag ctgagaacct atttatagca aactgataat tgctttataa ttcttcggta
     3361 atgatagctc agggaaggtg aaggttgtga ttgggtgact tgaattgtca ctggatatgg
     3421 gaattgaatt gttttactgc tcttaacctg ttcaaactgg ggcaggttcc aggaacttga
     3481 actaaaaaat gtctctttaa gtctccccct gccctgcttt tctctaaaag ccttggtttg
     3541 tgtagacaga actgtggtgt tggtgtgtta ggggtgactg ttgccatagg aagtacttgc
     3601 atgaggactg ggcttgaaaa tttgagcttt ctgtgcctca gactactcag tcacccggct
     3661 ccccagcacc acacgtcctt ctgtagttgg ctctctgcac aaacgcttcg gtggttcttc
     3721 ccactttccc cacaagaaag ctgtttttgg aatgtagcct cccagatggc ttctcagggg
     3781 tatccttgtg ccaaccaaag gactcccttc ctgttgctgt gcctttgctg tccccttctc
     3841 ttcgcccggt ctaaacctct cctccccagg gctcctcagg cacagttttc acaaactctg
     3901 tcttcatttc ttccaacccc tgggtgtgcc ctggtgtacg tacgaaccac cctcctaccc
     3961 agtctcgctc cgtattagcg cctcaaagca ggggcttcac ggaactagac gtgccggtgc
     4021 tcctactctg gctggggaag agatagaggc aagtacctag tgaaggacag agggtaacac
     4081 agggaaacat tccagccatt gagacaaagc tgaaaatacg tacacaaggc catgcagggc
     4141 tctactgaat ctgtaaatta ccttttattt gctctatgca atgttggcca cttgggtgag
     4201 gtgggaactc actctaccga gacgccatgg caatcctttg caaacattgg gaaatgcaat
     4261 atatataaac tagaggtttg tagtaatgcc acttgtagct gaattccata gcagagtaat
     4321 cttctctgtg ggtgatgtgc tgtagcatag ggaaacttga aaattccaaa gtcctgccct
     4381 tttttgagag actggtttag tttgtgtgta tgtgtgtatg tgtatgtgtg tgtgcgtgtg
     4441 tatgtgtgtg tgtcatattt attaattatt ttaaaagaga attgtttgtt ttgtagatat
     4501 gtattaagaa cagccaaact ggatatttcc acttggcaag gaacataaac tttttgaaac
     4561 tcaggcctta cccagtagct tggaagacca actcaagggt taggatctgt gttcttgttt
     4621 cctgtcactt ccgtcttcaa ttcctggtgt cctttaatga tatttaaaat cttgtgactc
     4681 aaaatttatt ttgcttaatt ctgatgtaga catgcatgtt tacatttata taaaatattt
     4741 cctgtgtagt ttcctctcaa gatgaatata tttaaataaa aatgaaggtc agcaatatat
     4801 ttaatgtctt gggttttttt tttttaagct gaaaatctat gtgaaataga gtt
//
