LOCUS       XM_003750061            4908 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus E2F transcription factor 2 (E2f2),
            transcript variant X1, mRNA.
ACCESSION   XM_003750061
VERSION     XM_003750061.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 1, 2024 this sequence was replaced by
            NM_001427622.1.
            
            On Jan 21, 2021 this sequence version replaced XM_003750061.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4908
                     /gene="E2f2"
                     /note="E2F transcription factor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 142 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:684111"
                     /db_xref="RGD:1593939"
     CDS             488..1816
                     /gene="E2f2"
                     /codon_start=1
                     /product="transcription factor E2F2 isoform X1"
                     /protein_id="XP_003750109.1"
                     /db_xref="GeneID:684111"
                     /db_xref="RGD:1593939"
                     /translation="MLRAPRTLAPATAQPTKSLPTLNPTELWPSGLSSPQLCPATTAT
                     TYYTSLYTQTVPSSAALGTCLDATPHGPEGQIVRCVPAGRLPAKRKLDLEGLGRPTVP
                     EFRTPKGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWA
                     AEVLDVQKRRIYDITNVLEGIQLIRKKSKNNIQWVGRGIFEDPTRPAKEQQLGQELKE
                     LMNAEQTLDQLIQSCTLSFKHLTEDNANKKLAYVTYQDIRAVGNFKEQTVIAVKAPPQ
                     TRLEVPDRAEENLQIYLKSTQGPIEVYLCPEEGQEADSPTKEALPSTSTLSPVPDCAQ
                     PGCSTDSGLAETIESSVLMPQPVPPPLPPPPPAPSLVPLEATDNMLELSHPLLQQTED
                     QFLSPILTASSPLISFSPPLDQEEYLWGMDEGEGISDLFDSYDLGDLLIN"
ORIGIN      
        1 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaagaaagaa agaaaaaaaa gaaagaaaag
       61 aaaaaaaaga agatagaaag aaaagaaaaa ggagtccaag caagggacgg gaattagagg
      121 gtgaacggag agctcagcgg ggcgcacagg acacccttcg cgggtcagaa tacactcgtg
      181 tcggcggagt ccgtgggcat cccgggacgc tttcacgcac cggggcgact acgggcgccc
      241 agacattccg ggcgcagccc ggcccgggcc agcccctggc agtgccaccc gcgccacgcg
      301 atctccgagt ggcgatctct gagctcgact gtgctgggcg gcgggccagg aggggagggt
      361 ccggccttgc ccggcgggcg tccattggcg gctgctcccg gcgtccgcgg tgcagccggc
      421 tgcaaagccc gcaggtgccc cgcgcgcgcg cgccataccc gagtgggtag ggggcgccgc
      481 actcgccatg ctgcgcgcgc cgcggaccct ggctccggcc acggcgcaac ccacaaagag
      541 cttgccgacg ttgaacccca ccgagctgtg gccttcgggt ctgagcagtc cccagctctg
      601 cccggccacc accgccacta cctactacac ttcgctttac acgcagacgg tgccttcctc
      661 tgcggcgctg ggcacctgcc tcgacgccac tccccacgga cccgagggcc aaattgtgcg
      721 atgtgtaccc gcaggccgcc tgccggccaa aaggaagcta gacctggagg gccttgggag
      781 gcctacggtc ccagaattcc ggactcccaa ggggaagtgc atccgagtgg atggtttgcc
      841 aagcccgaaa acccctaagt ctcctgggga gaagacacgc tatgacacgt cgctggggct
      901 gctgaccaag aagttcattt acctcctgag cgagtcggag gatggagtcc tggacctgaa
      961 ctgggcagct gaggtgctgg atgtgcagaa gcggcgcata tatgacatca ccaacgtgct
     1021 ggagggcatc cagctcatcc gcaagaagtc caaaaacaac atccagtggg taggcagggg
     1081 aatatttgaa gaccccaccc gaccggccaa ggagcagcag ctggggcagg aactgaagga
     1141 gctaatgaat gcggagcaga ccttggacca gctcattcag agctgcacgc tgagcttcaa
     1201 gcacctgaca gaagataatg ccaacaagaa actggcctat gtgacctacc aggatatccg
     1261 tgctgtgggc aacttcaagg agcagacagt gattgcggtc aaggccccgc cacagacaag
     1321 attggaagtg ccggacaggg cggaggagaa cctgcagatt tacctaaaga gtacccaagg
     1381 ccccattgaa gtctacctgt gcccggagga ggggcaggag gcagacagtc ctaccaagga
     1441 ggccctaccc tccacctcta ccctcagccc tgtccctgac tgcgctcagc ccggctgcag
     1501 caccgactct gggctggcag agaccataga gtcttcagta ctgatgccac agccggtacc
     1561 gccaccgctg ccgccgccgc cgccagcacc atcccttgtc cccttggaag ccactgacaa
     1621 catgctggag ctgtcacacc cacttctgca acagactgag gaccagttcc tgtccccaat
     1681 cctgacagcc agctcccctc tgatcagctt ctccccgccc ttggaccagg aggagtacct
     1741 gtggggcatg gatgaggggg agggcatcag tgacctcttc gactcctatg accttgggga
     1801 cctgctgatt aattgaagcg tcctgcatct gtctctacct cctcacagac agattgacag
     1861 gctctctgcc cagatttggg gggggggagt ggggacacta gacaccaggt gtcaccctcc
     1921 gtgtgccagc ggctccattc cagccttcct tcgggtggag gccacctagg gagatgtgga
     1981 ggatgtggct gaggagtgta tcgggctaag ccctgctctt cctcttctga cctctgaccc
     2041 cctcatgaag gactacagtt gcaggtggcc acgttcaggg aaagggtcca ctgcctcctt
     2101 ctgaggggca gtagggccct ggctttttca agaagcactt aacgcctttg tatttatttc
     2161 aagttgagtt gtatgtgttt gtccaccctg agttttagca gggaggtttg ttctagtttt
     2221 tcctcagaca ggcccaccca tgcccgttgc ctaagggcac atctgggctt ccaggggtct
     2281 gggccacacc tccttgcccc cgcccctcgc ccctatagtg gtgcctgggt cttgaggaga
     2341 ctatccagtt tgcttgaata ttgattacac ttaggctttg taattttaga aggtgccagg
     2401 cccagcccag gcattggctt ggggtcctcc atctcctcca ctctagagaa ggttccagta
     2461 gctatcctgc gggaggtagg caagagagcc cgcttcctgt cgaatctctc atcttccttg
     2521 agccttagaa tataaatgtg ggccttcagg aactagctca gaagagctcc tgggaaaagc
     2581 aggaggcagg tgtcatggct ccctgatgcc cttcctcaga gcttctgtcc gggtcagaga
     2641 cctggaaggt ggaggcagag agaagtttga gaagaaacaa gaaacatccc ggggggggct
     2701 acccacgctc ccctgggagg attattttgt ttcttggtcg cggttgttgg agggggagat
     2761 tccttaaaca cccactgtcc caagccctca cttcagttcc agggtcagat gtgactggag
     2821 cttggggaca ggtttgtacc tttccccact gaagtgctga ggggatgaca gggcaggggc
     2881 ggggtactcg tccctgcaga ctaggcctca gcagctctga ggagatagag gtgcccgcca
     2941 cctctcctgg agtggggatc tcggaagagc tctgggtctc acttgttttt cccatagact
     3001 gaccatccag ggtccctgtg gttagatggg gacaggagtt tttctccctt gcctttctgg
     3061 ggatggagaa gggctaaacc aaggccatgt tgtctggaga ggtgcaccca ggggtgaagg
     3121 ggtctgagag gccttccacc taccctcaga gagcctgggt tcctcagggg ctcagtgggg
     3181 cagcactttt tgttattgtc gttgtaagtt tgtagcatta aaattgatgt aaaagatgaa
     3241 gttgactatg ccaggtagct tctaggcggc cgactggcat tttgaagttc ggatgttgag
     3301 ctaacatgaa ctggtgccca tttgggttaa cttgtcttta tccttgactc agcttcctgg
     3361 gcccacaaag ttagtccctg tctgaggagt ggtcagggat tcacacaact cccctacttg
     3421 aaatgtgtat ccctttacac caagtgtcca caaccttttg acatatgtga ccttttcgtc
     3481 tctaaagttc accctcaaga actgcataga taagctacca aaaaaaaaag aatctcatgg
     3541 tgttttaagt atgtttacaa ttttgtgttg ggctgtgttt gtaggtgtct gtggcacatg
     3601 ctacagagat gtccttggtc tctaccaaac acgggggctt ctcaggccac caggaagccc
     3661 agcgtgccct agacacgaag ggacccttga gtgatgagga tgctacctgg ggtctggttt
     3721 gatgcaagtg aagcgggaga cagcgttgtt gttctctggt ctttaccatt taaccgtgtg
     3781 ccaactccga gaccagagat gcctgacctg ttaggttagg gttaggggga agagggctgt
     3841 acttcctgcc tggaagaggt tcagaatgca gtccagattc gagttcagtc accaaaggcc
     3901 cagcacaggg atggatggag aggccttcct agaagctgcc ttttgatctc tgaactgtct
     3961 cttttccact atggcctggt caaggggctg ggcctcgggg gagaagccca aggctagcat
     4021 gggaaatcag ctcatgcctc tttcttgcca atgatacttg agacctcgaa gttccttaga
     4081 gtgctttaaa agaatggggt gtacccccat ttggaacact gttttgagtg gtgtgtcttt
     4141 taggccctat gggaactttc atgctagggt gggaaaaata ccagtttctt tctgagggga
     4201 ggactttctt cagggagatt tcccagccct gccagtgtcc ccaggggctt gatgtccctg
     4261 gggaccccag agcacttagc agaattaaac tgtaaatagg ctttggaaat gcaccgtgtg
     4321 agatgtcagg atgagtggca tggtggcatg gccagctagt gtggctgcaa ggagtgtggg
     4381 agtttgggga gtctataaac catttcaggg gtgcaagctt ggttttctct ccctgcgtgt
     4441 tctcagcctc tcttctgcac aaattaatgt ggtgaagagt ttgctcatgc tggcataggg
     4501 cgatatattg ctttagcaca tctgaaacct ttggggttga ttagaagctt tttttttttt
     4561 tttgtttttg tttttgtttt cgtttttgtt gttttttgtt ttgttctctg tcatactcag
     4621 aggctccgcc tcgcccagat cctctcttct gccacgaggc tcttcaggga tcgtcgtggc
     4681 cacgggtctg gccagcctct ggcttctggg agataacgaa gtcttgtggg ttttgatctt
     4741 ttgatcgttt tgaggatgcc tgggggtggg gagttctgga gtccctgggt tgggactcca
     4801 tgtgggttac ctacctctcg gtttcaccca aagtcctgcc ttgaacacca gcaagtttca
     4861 ttctgttgtg ataattgggc attaaataac gaacggcagc tccagaaa
//
