LOCUS       XM_003750707            2096 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dystrotelin (Dytn), mRNA.
ACCESSION   XM_003750707
VERSION     XM_003750707.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750707.4.
            
            On Jan 21, 2021 this sequence version replaced XM_003750707.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2096
                     /gene="Dytn"
                     /note="dystrotelin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins, and 35%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100361043"
                     /db_xref="RGD:2320917"
     CDS             1..1947
                     /gene="Dytn"
                     /codon_start=1
                     /product="dystrotelin"
                     /protein_id="XP_003750755.3"
                     /db_xref="GeneID:100361043"
                     /db_xref="RGD:2320917"
                     /translation="MDPNKQGALNRIENSVYRTAFKLRSIQTLCQLDLMSSSLIQQVL
                     WHEHLGEVTVTSISVQQLFQELRELFQRTGMGSPVQVHPRAPELTLSLLMAMFDRTGS
                     GILKLQPVAAALVALSGDSPLTKYRALFQLYAENNRRGDESQARMTRRVLRALLTDLQ
                     QIPTVVGESCSLCPVESAIHSCFRGVLSFGIKEEKFLSWAQSEPLVFLWLPTCYRLSA
                     SETVTHPVRCSVCRSFPIIGLRYRCLKCLDFDICELCFLSGLHKKSHQKSHTVMEDCV
                     QMSATENTKLLFRSLRNNLPLRHHRAGAVGRQWLLDQLASGDSGSSHGQARLCIQYKG
                     PKTPVYASSAGAVETAATERTRFLCQRSSPALQAIDSPHRHGSTVVNIKNELWRTRDS
                     VNALHRERRFLRKQLQRYKHKLQGTYTLQENQNCRFETKIRELTINQDNLWTKLQQMR
                     RDLQAMLQPPRPSSPQTTVLKIVHSLPDDGLWRGGNSSHIKSVTRDSPEWEPLPNSAK
                     VNRKHKCQASSGKVPPDSESPEIIFQSTSKQSHPQKMPREVHSSPSARQEELQDSLQI
                     PPTEVSSPTQTPGKEMDCFSEKRNDLEDEELQELLPRLLDAFSLDSSTGPQPLVDVEL
                     YGRAEQVCRAFSALVDQVTLPSLE"
ORIGIN      
        1 atggacccaa ataagcaagg tgctcttaat aggattgaga attctgtcta tagaacagcc
       61 ttcaaattac gatctattca aactctttgc caattggact tgatgagcag ctccctgatt
      121 cagcaagttc tatggcatga acatttgggg gaagtcacag tgacctccat ttctgtgcag
      181 cagctttttc aggagctccg ggagctgttt cagagaactg ggatgggaag tccagtccaa
      241 gtgcatccaa gagcaccgga actcactctg agtcttctga tggccatgtt tgacagaaca
      301 ggatcaggaa ttcttaagct tcaacctgtg gctgccgcgc tggttgctct ctcaggggac
      361 agccctctca caaagtacag agctcttttt cagctctatg cagaaaacaa caggagaggt
      421 gatgaatccc aagcccgcat gacccgaaga gttttgagag ccttactaac agatctccag
      481 cagatcccaa ctgtggtagg agagagctgt tctttgtgtc ccgtggaaag tgctatccac
      541 agctgcttcc gaggggtgtt gagctttgga atcaaggagg aaaaattcct gtcttgggca
      601 caatctgagc ctcttgtctt cctgtggctc ccaacctgct accgattatc agcctcggaa
      661 acagtcactc accctgtgcg gtgcagtgtt tgcagaagct tcccgatcat aggactgaga
      721 taccgttgtc taaagtgcct cgactttgac atctgcgagc tgtgtttctt atctggtctc
      781 cacaaaaaat ctcaccagaa gtcacacact gtgatggagg actgtgtcca gatgtcagca
      841 acagagaata caaaactcct cttcaggagc ctcaggaaca acctgcccct gagacaccac
      901 agggcaggag ctgtggggag gcagtggctg ctggaccagc tggcttcagg ggactcaggt
      961 agtagccacg ggcaggccag gctttgcatt caatataaag gccctaaaac cccagtgtat
     1021 gcaagctcag ccggagcagt agaaacagca gccacagaac gcaccagatt cctgtgccaa
     1081 aggtcatcac ctgctctgca agcaattgac agcccgcatc gccatggttc aaccgtagtc
     1141 aacattaaga atgagctgtg gaggactcgt gactctgtca acgctctgca cagggaaaga
     1201 aggttcctta gaaaacagtt gcaaagatac aagcacaaat tgcaaggcac atacacctta
     1261 caggaaaacc agaactgcag atttgaaaca aagattcggg agctcacaat caaccaagat
     1321 aacctgtgga ccaagctaca acagatgaga cgagacctac aggcaatgtt gcaaccacct
     1381 cgtccttctt ctcctcaaac cacagtattg aagattgtcc attctttacc agacgatggc
     1441 ttatggagag gaggtaactc ttcccacatc aagagtgtca ctagggatag tccggaatgg
     1501 gaacctcttc ctaattctgc caaggtgaac agaaagcaca aatgtcaagc aagttcagga
     1561 aaagttccac cagactctga atccccagag atcatttttc agagcactag taaacaaagt
     1621 cacccacaaa agatgccaag ggaagtccat agttccccat ctgctcgcca agaggaactg
     1681 caggacagtc tccagattcc tcctactgaa gtaagcagcc ctactcaaac accaggcaaa
     1741 gagatggatt gcttcagtga aaagagaaat gacctggaag atgaggaact acaagaattg
     1801 ttgcccagac tcctggatgc ctttagccta gactcatcaa caggtccgca gcctttggtg
     1861 gacgtggagc tatatggtag agccgagcaa gtgtgcaggg ccttctctgc ccttgtggat
     1921 caagtcacct tgcccagctt ggagtaaaaa gaaatccaga ctcaagggcc ccttggtgtg
     1981 atggcaaaac cgttattcag aatctgaatt agaaagaaga aagccttcat cgcatctcta
     2041 aatggttgct gtgaagggta tgaacttagg ttttgggtat tttctttaaa tactcc
//
