LOCUS       XM_039090693            2114 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dual specificity tyrosine
            phosphorylation regulated kinase 3 (Dyrk3), transcript variant X4,
            mRNA.
ACCESSION   XM_039090693
VERSION     XM_039090693.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039090693.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2114
                     /gene="Dyrk3"
                     /note="dual specificity tyrosine phosphorylation regulated
                     kinase 3; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 ESTs, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 41 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:304775"
                     /db_xref="RGD:1310924"
     CDS             371..1885
                     /gene="Dyrk3"
                     /codon_start=1
                     /product="dual specificity
                     tyrosine-phosphorylation-regulated kinase 3 isoform X2"
                     /protein_id="XP_038946621.1"
                     /db_xref="GeneID:304775"
                     /db_xref="RGD:1310924"
                     /translation="MKVEQLFQEFGSRRTSTLQSDGVSNSEKSSPASQGKSSDSLGTV
                     KCSLSSRPSKVLPLTPEQALKQYKHHLTAYEKLEIISYPEIYFVGPNAKKRQGVIGGP
                     NNGGYDDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNE
                     KRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKK
                     NKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSATKVIDFGSS
                     CFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQ
                     LACMMELLGMPPQKLLEQSKRAKYFINSKGLPRYCSVTTQTDGRVVLLGGRSRRGKKR
                     GPPGSKDWAAALKGCDDYLFIEFLKRCLQWDPSARLTPAQALRHPWISKSAPRPLTTD
                     KVSGKRVVNPTNAFQGLGSKLPPVVGIASKLKANLMSETSGSIPLCSVLPKLIS"
ORIGIN      
        1 gcgcggttgc taggcgacgc ggctgcaccc gcgcggtctc cctgcggacc gcgcgagccc
       61 atctcagagc cgcggcttgt agtgaagcct gcaggtgcgg ggctagaggc gacccaccgg
      121 gccaaccgcc gcctctgtgc ccgcggggcg agctcgcgat gggaggcgca gcccgcgagc
      181 gcgggaggaa ggacgcggcg ctgccggggg ccgggctccc gccgcagcag cggagatgaa
      241 accaagtgcc caccctatac aaacacactt tgcaatccct ctgaagcacc tgtctccaga
      301 aggctaaatg taaattacca ctgagccatt cacgagaggc cacactcagc acttcgtgag
      361 tgggggtgtg atgaaggtgg agcaactgtt tcaagaattt ggcagcagaa gaaccagtac
      421 tctccagtcc gatggcgtca gcaactccga aaagtcctct cctgcttctc aggggaagag
      481 ttcagacagc ctgggtacag tgaagtgcag cctctcatcc agaccatcta aggtgctccc
      541 gctgactcct gagcaagctc tgaagcagta caagcaccac ctcaccgcct acgagaagct
      601 ggagatcatc agctacccag aaatctactt cgtgggcccg aatgccaaga agcggcaagg
      661 agttattggt ggtcccaata acggggggta cgacgatgcg gacggggcct atatccacgt
      721 gcctcgagac catctggctt accgctatga ggtgctgaaa attattggca aggggagttt
      781 tggacaggta gcccgggtct acgatcacaa actccgacag tacgtggccc tgaaaatggt
      841 gcgcaacgag aagcgctttc accgccaggc agccgaggag atccggattc tggagcatct
      901 taaaaagcaa gacaaaactg ggagcatgaa tgtcatccac atgttagaaa gcttcacctt
      961 ccggaaccac gtgtgcatgg cctttgagtt gctaagcata gacctgtacg agctcattaa
     1021 aaaaaacaag tttcagggct tcagcgtcca gttggtccgg aagttcgccc agtccatcct
     1081 gcagtccttg gacgcccttc acaaaaataa gatcattcac tgtgatctga agcctgagaa
     1141 cattctcctg aagcatcacg gacggagcgc gaccaaggtc attgacttcg ggtccagctg
     1201 ttttgagtat cagaaacttt acacgtacat ccagtcccgt ttctacagag ccccggaaat
     1261 catcttgggg tgccgctaca gcacgccaat tgacatatgg agttttggtt gcatcctcgc
     1321 agaacttttg acaggacagc ccctgttccc aggagaggat gaaggagacc agttggcctg
     1381 catgatggag ttgctaggaa tgccaccaca gaaacttctg gagcaatcca aacgtgccaa
     1441 gtactttatt aactccaaag gcttgcctcg atactgctcc gtaactaccc agacggacgg
     1501 gagggttgtg cttctcgggg gccgctcacg caggggtaaa aagcgaggcc caccaggcag
     1561 caaagactgg gcagccgcgc tgaaggggtg cgatgactac ttgttcatag agtttctgaa
     1621 aaggtgcctt cagtgggacc cctctgcccg cctcacccca gctcaagcat taagacatcc
     1681 ttggattagc aagtctgcac ccaggcccct caccacggac aaggtgtcag ggaaacgggt
     1741 agttaatcct acaaatgctt tccagggact gggctccaag ctgcctccag tcgttggaat
     1801 cgccagtaag cttaaagcta acctaatgtc ggaaaccagt ggtagtatac ctctgtgcag
     1861 tgtattgcca aagctgatca gctaatggac cactcagact catacatacg tatttttaat
     1921 taccttacag acatgcaaat ggaaaaaaaa ataattgaag cccattcacc gatggatatg
     1981 tttttgttag actttttttt tttaacaagg cagaacattt ttatatgact ataaacaaac
     2041 gcttcaaggg ctaatgtcta accagcttgt attggccatc tggagtatac attaaatgac
     2101 tttttaatag gtca
//
