LOCUS       NM_001412559             717 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus dynein light chain Tctex-type 2 (Dynlt2),
            transcript variant 1, mRNA.
ACCESSION   NM_001412559 XM_006227971
VERSION     NM_001412559.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   DiBella,L.M., Benashski,S.E., Tedford,H.W., Harrison,A.,
            Patel-King,R.S. and King,S.M.
  TITLE     The Tctex1/Tctex2 class of dynein light chains. Dimerization,
            differential expression, and interaction with the LC8 protein
            family
  JOURNAL   J Biol Chem 276 (17), 14366-14373 (2001)
   PUBMED   11278908
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Huw,L.Y., Goldsborough,A.S., Willison,K. and Artzt,K.
  TITLE     Tctex2: a sperm tail surface protein mapping to the t-complex
  JOURNAL   Dev Biol 170 (1), 183-194 (1995)
   PUBMED   7601308
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 6, 2022 this sequence version replaced XM_006227971.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.2116228.1,
                                           SRR26360186.1977292.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-190               JAXUCZ010000001.1  64656179-64656368   c
            191-397             JAXUCZ010000001.1  64649626-64649832   c
            398-556             JAXUCZ010000001.1  64646761-64646919   c
            557-717             JAXUCZ010000001.1  64644404-64644564   c
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..717
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /note="dynein light chain Tctex-type 2"
                     /db_xref="GeneID:365153"
                     /db_xref="RGD:1310947"
     exon            1..190
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..667
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /note="isoform 1 is encoded by transcript variant 1;
                     tctex1 domain-containing protein 3; t-complex-associated
                     testis expressed 3; dynein light chain Tctex-type protein
                     2"
                     /codon_start=1
                     /product="dynein light chain Tctex-type protein 2 isoform
                     1"
                     /protein_id="NP_001399488.1"
                     /db_xref="GeneID:365153"
                     /db_xref="RGD:1310947"
                     /translation="MERRGRTAKTPSTQTHQSPVSSKRERRPSMFEKESYAQILRERL
                     RESFHDVQYVEPPFDDSIADLGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKIQQI
                     LKASLKDVKYDDKAFSHLSLELADRILAAVKEFAFHRYKFIIKVLFIQKTGQAINIVS
                     RWIWDVAWDSWVEAKHETESYLALVLVFALYCE"
     exon            191..397
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /inference="alignment:Splign:2.1.0"
     exon            398..556
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /inference="alignment:Splign:2.1.0"
     exon            557..717
                     /gene="Dynlt2"
                     /gene_synonym="Tcte3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagactagtg ctcagcggca gctcggcggg gcgttggacg gctacccgga ggagagaggc
       61 taggcgtccg ggtgaaacga tcaagatgga gcggcgaggc cgaacggcga agacgccctc
      121 cacccaaacg catcaatccc cggtgtcgtc taagagagaa aggaggccta gcatgttcga
      181 gaaggagtca tatgcacaga tcttaagaga aagactgaga gagtcttttc atgacgttca
      241 gtatgtggag cctccgtttg atgactcgat tgctgattta ggcaaagaat ggaaaagtgc
      301 cctggcaaaa ttaaagtttg ctaattcata tagaatggaa ccattgaaga aattccaagc
      361 acattctgta gaaactaaaa tccagcagat attaaaggcc agtcttaaag atgttaaata
      421 tgacgacaaa gccttctctc atttgtcact tgaattggca gatcgaatat tggcagcagt
      481 caaagaattt gcattccatc gttataaatt cattataaaa gtattattta ttcaaaagac
      541 tggtcaagca ataaatattg tcagcagatg gatctgggat gtggcatggg acagctgggt
      601 agaagctaaa catgaaacag agtcttactt ggcattggtc ttggtgtttg ctctctattg
      661 tgagtagctc aggaccagca gttttacacc ctctcacccc aataaatgat gtataca
//
