LOCUS       XM_017600879            2729 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dymeclin (Dym), transcript variant X3,
            mRNA.
ACCESSION   XM_017600879
VERSION     XM_017600879.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017600879.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017600879.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2729
                     /gene="Dym"
                     /gene_synonym="RGD1309111"
                     /note="dymeclin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 28 ESTs, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 34 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:291433"
                     /db_xref="RGD:1309111"
     CDS             332..2503
                     /gene="Dym"
                     /gene_synonym="RGD1309111"
                     /codon_start=1
                     /product="dymeclin isoform X2"
                     /protein_id="XP_017456368.1"
                     /db_xref="GeneID:291433"
                     /db_xref="RGD:1309111"
                     /translation="MGSNSSKISDLPKNEYLKRLSGPEAISENDPFWNQLFSFSFSAP
                     TSSTELKLLEEATISVCKSLVENNPRTGNLAALTKVFLARTRELRLSAECQNHIFIWQ
                     THNALFIICCLLKVFICEMSEEELQLHFTYEEKLPGTYSSDSEDLLEELLCSLIQLIT
                     DTPLLDITYEISVEAISAMIVFLSCQLFHKEVLRQSISHKYLMQGPCLPYTSKLVKTL
                     LYNFIRQEKPPPPGTHVFPQQSDGGGLLYGLASGVATGLWTVFTLGGVGSKAASPELT
                     SPLANQSLLLLLVLVNLTDAPDIPNPYRQAVTSFKNTQDSSPFPSSVPHTFQINFNSL
                     YTTLCEQQTSDQATLLLYTLLHQNANVRTYMLARTDMENLVLPILEILYHVEERNSHH
                     VYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNM
                     TRTRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISYTCRHLRRCVYLSDRLYSPRSP
                     RSARQRCLSAPSDSGEELLSLTCSHILRSYASSLFSLLSKKHNKVLEQATQSLRGSLS
                     SSDVPLPDYAQDLSVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTH
                     PSFQDIMQNIDLVISFFSSRLLQSGAELSVERVLEIIKQGVVALPKDRLKKFPELKFK
                     YVEEEQPEEFFIPYVWSLVYNSAVGLYWNPQDIQLFAMDSD"
ORIGIN      
        1 cgtgccacgg gaccgcccgc tgctggcgcg cgcttagccg ttcggtcccc agccgcgtcc
       61 tccgtcgctt ccctcttctc acttcagctc ttgcgtctcc gcaccgacag ccgctggggc
      121 cgctggggcc gccggagcgc ggtcggagca ggagccgctg agctacggaa ccatggaggc
      181 ctaagccagc gtgcacaccc ggccccctgt gcgcccgcgc tctcgctccc ttgctgcctg
      241 ctcgccgcgg ctggaagcgg agtccgcgcc gctgacacag gttgtcctgt ggaaatgccc
      301 atgtgaagac aagctgccta ccacagagaa gatgggatcg aacagcagca agatcagtga
      361 tctacctaag aatgagtact taaagaggct gtcaggcccc gaggctatct ctgaaaacga
      421 ccccttctgg aatcagctct tctctttttc tttctctgca ccaaccagca gtactgagtt
      481 gaagctgtta gaagaggcaa ccatttcagt ttgcaagtct ttggttgaaa acaaccctcg
      541 aacagggaac ctcgctgcgc taactaaggt cttccttgct agaaccagag agctcaggct
      601 ttcggccgag tgtcagaacc acatcttcat ctggcagaca cacaatgcct tgtttatcat
      661 ctgctgcctg ctgaaggtgt tcatctgtga gatgtctgag gaagagctgc agcttcactt
      721 cacgtatgaa gaaaagttgc ccggcaccta cagttctgac tctgaagatc ttttggaaga
      781 attgctctgc agcttgatac agttaatcac tgacactcca ctcctggata tcacatatga
      841 gatatcagtg gaggccatct cagcaatgat tgtcttcctt tcctgtcagc tcttccacaa
      901 ggaggttctg cggcagagca tcagtcacaa gtacctgatg caaggtccat gtcttcccta
      961 caccagcaaa cttgtgaaaa ccttattata taactttatc agacaagaaa agccacctcc
     1021 gcccggaacc catgtcttcc ctcagcagtc ggacggggga ggactgctgt atggactggc
     1081 gtcaggagta gcaactggtc tctggaccgt cttcacgcta ggcggggtgg gcagcaaagc
     1141 cgcctctccc gaacttactt cccctctggc caaccagagt ctcctgctgc tgttggtgct
     1201 ggtgaacctg acggatgccc cagacatccc caacccctac agacaggccg tcacgtcgtt
     1261 caagaacaca caagacagca gtccgttccc atcatccgtc ccgcacacct tccagattaa
     1321 ctttaacagt ttgtacacaa ccctgtgtga acagcagacg tctgaccagg caacgctcct
     1381 cctgtacact ctgttgcacc agaacgccaa tgtcaggacg tacatgctgg cccggacaga
     1441 catggaaaac cttgttttac caattctgga gattctatat catgttgagg aaagaaactc
     1501 gcaccatgtc tacatggccc ttataatcct gttgatcctt acggaagacg acggcttcaa
     1561 tcggtccatt catgaggtga tattaaaaaa cattacttgg tattcagaaa gagtcttaac
     1621 tgaaatttcc ctggggagcc tcctaattct ggtggtaata agaaccatcc agtacaatat
     1681 gaccaggact agagacaagt acctgcacac caattgcctg gcggcgttag caaacatgtc
     1741 agcacagttt cgctccctcc accagtatgc tgcccagagg atcatcagtt acacctgccg
     1801 ccacttgcgg agatgtgttt atttgtcgga cagattgtat tccccccgct ctccccgttc
     1861 tgcacgtcag cgttgcctct cggcccccag tgacagtgga gaggagctct tgtctctaac
     1921 ttgctctcac attctcagat cctatgcctc cagtttgttt tctttgctgt ctaaaaaaca
     1981 caacaaggtt ctggagcaag ccacgcagtc cttgagaggt tccctgagct ccagcgatgt
     2041 ccctctccca gattatgccc aggacctcag cgtcattgaa gaagtgattc ggatgatgct
     2101 ggagatcatc aactcctgcc tgactaattc tctccaccac aacccgaact tggtgtatgc
     2161 cctgctttac aaacgggacc tctttgagca attccggact cacccctcat tccaagacat
     2221 aatgcagaac attgacctgg taatttcctt ctttagctca agactgctac aatctggagc
     2281 tgagctgtca gtggaacggg tcttggaaat cattaaacaa ggggttgtgg cactacccaa
     2341 agacagacta aagaaatttc cagaactgaa attcaaatac gtggaggaag agcagcctga
     2401 ggagttcttc atcccatacg tctggtctct ggtctacaac tcggcagttg gcctgtactg
     2461 gaacccacag gacatccaac tgtttgccat ggactcagac tgaagcagga cacggccatg
     2521 cctaccccag cccagctgct agttacttca cgtccaggag cagagcagac agactgcccg
     2581 cccggtgtgt cttctgccac agagggtcac acagcctgct tctctcacac actgtgactg
     2641 tcgggagact tctcagttag cggtagttca ctgagctttg atgtactgca agggcgagca
     2701 cagaaataaa cggaaaacat gctgttcaa
//
