LOCUS       XM_008772103            2561 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dymeclin (Dym), transcript variant X6,
            mRNA.
ACCESSION   XM_008772103
VERSION     XM_008772103.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008772103.3.
            
            On Jul 26, 2016 this sequence version replaced XM_008772103.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2561
                     /gene="Dym"
                     /gene_synonym="RGD1309111"
                     /note="dymeclin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 29 ESTs, 1 long SRA read,
                     9 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 211 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:291433"
                     /db_xref="RGD:1309111"
     CDS             329..2335
                     /gene="Dym"
                     /gene_synonym="RGD1309111"
                     /codon_start=1
                     /product="dymeclin isoform X5"
                     /protein_id="XP_008770325.1"
                     /db_xref="GeneID:291433"
                     /db_xref="RGD:1309111"
                     /translation="MGSNSSKISDLPKNEYLKRLSGPEAISENDPFWNQLFSFSFSAP
                     TSSTELKLLEEATISVCKSLVENNPRTGNLAALTKVFLARTRELRLSAECQNHIFIWQ
                     THNALFIICCLLKVFICEMSEEELQLHFTYEEKLPGTYSSDSEDLLEELLCSLIQLIT
                     DTPLLDITYEISVEAISAMIVFLSCQLFHKEVLRQSISHKYLMQGPCLPYTSKLVKTL
                     LYNFIRQEKPPPPGTHVFPQQSDGGGLLYGLASGVATGLWTVFTLGGVGSKAASPELT
                     SPLANQSLLLLLVLVNLTDAPDIPNPYRQAVTSFKNTQDSSPFPSSVPHTFQINFNSL
                     YTTLCEQQTSDQATLLLYTLLHQNANVRTYMLARTDMENLVLPILEILYHVEERNSHH
                     VYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNM
                     TRTRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRG
                     SLSSSDVPLPDYAQDLSVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQF
                     RTHPSFQDIMQNIDLVISFFSSRLLQSGAELSVERVLEIIKQGVVALPKDRLKKFPEL
                     KFKYVEEEQPEEFFIPYVWSLVYNSAVGLYWNPQDIQLFAMDSD"
ORIGIN      
        1 gccacgggac cgcccgctgc tggcgcgcgc ttagccgttc ggtccccagc cgcgtcctcc
       61 gtcgcttccc tcttctcact tcagctcttg cgtctccgca ccgacagccg ctggggccgc
      121 tggggccgcc ggagcgcggt cggagcagga gccgctgagc tacggaacca tggaggccta
      181 agccagcgtg cacacccggc cccctgtgcg cccgcgctct cgctcccttg ctgcctgctc
      241 gccgcggctg gaagcggagt ccgcgccgct gacacaggtt gtcctgtgga aatgcccatg
      301 tgaagacaag ctgcctacca cagagaagat gggatcgaac agcagcaaga tcagtgatct
      361 acctaagaat gagtacttaa agaggctgtc aggccccgag gctatctctg aaaacgaccc
      421 cttctggaat cagctcttct ctttttcttt ctctgcacca accagcagta ctgagttgaa
      481 gctgttagaa gaggcaacca tttcagtttg caagtctttg gttgaaaaca accctcgaac
      541 agggaacctc gctgcgctaa ctaaggtctt ccttgctaga accagagagc tcaggctttc
      601 ggccgagtgt cagaaccaca tcttcatctg gcagacacac aatgccttgt ttatcatctg
      661 ctgcctgctg aaggtgttca tctgtgagat gtctgaggaa gagctgcagc ttcacttcac
      721 gtatgaagaa aagttgcccg gcacctacag ttctgactct gaagatcttt tggaagaatt
      781 gctctgcagc ttgatacagt taatcactga cactccactc ctggatatca catatgagat
      841 atcagtggag gccatctcag caatgattgt cttcctttcc tgtcagctct tccacaagga
      901 ggttctgcgg cagagcatca gtcacaagta cctgatgcaa ggtccatgtc ttccctacac
      961 cagcaaactt gtgaaaacct tattatataa ctttatcaga caagaaaagc cacctccgcc
     1021 cggaacccat gtcttccctc agcagtcgga cgggggagga ctgctgtatg gactggcgtc
     1081 aggagtagca actggtctct ggaccgtctt cacgctaggc ggggtgggca gcaaagccgc
     1141 ctctcccgaa cttacttccc ctctggccaa ccagagtctc ctgctgctgt tggtgctggt
     1201 gaacctgacg gatgccccag acatccccaa cccctacaga caggccgtca cgtcgttcaa
     1261 gaacacacaa gacagcagtc cgttcccatc atccgtcccg cacaccttcc agattaactt
     1321 taacagtttg tacacaaccc tgtgtgaaca gcagacgtct gaccaggcaa cgctcctcct
     1381 gtacactctg ttgcaccaga acgccaatgt caggacgtac atgctggccc ggacagacat
     1441 ggaaaacctt gttttaccaa ttctggagat tctatatcat gttgaggaaa gaaactcgca
     1501 ccatgtctac atggccctta taatcctgtt gatccttacg gaagacgacg gcttcaatcg
     1561 gtccattcat gaggtgatat taaaaaacat tacttggtat tcagaaagag tcttaactga
     1621 aatttccctg gggagcctcc taattctggt ggtaataaga accatccagt acaatatgac
     1681 caggactaga gacaagtacc tgcacaccaa ttgcctggcg gcgttagcaa acatgtcagc
     1741 acagtttcgc tccctccacc agtatgctgc ccagaggatc atcagtttgt tttctttgct
     1801 gtctaaaaaa cacaacaagg ttctggagca agccacgcag tccttgagag gttccctgag
     1861 ctccagcgat gtccctctcc cagattatgc ccaggacctc agcgtcattg aagaagtgat
     1921 tcggatgatg ctggagatca tcaactcctg cctgactaat tctctccacc acaacccgaa
     1981 cttggtgtat gccctgcttt acaaacggga cctctttgag caattccgga ctcacccctc
     2041 attccaagac ataatgcaga acattgacct ggtaatttcc ttctttagct caagactgct
     2101 acaatctgga gctgagctgt cagtggaacg ggtcttggaa atcattaaac aaggggttgt
     2161 ggcactaccc aaagacagac taaagaaatt tccagaactg aaattcaaat acgtggagga
     2221 agagcagcct gaggagttct tcatcccata cgtctggtct ctggtctaca actcggcagt
     2281 tggcctgtac tggaacccac aggacatcca actgtttgcc atggactcag actgaagcag
     2341 gacacggcca tgcctacccc agcccagctg ctagttactt cacgtccagg agcagagcag
     2401 acagactgcc cgcccggtgt gtcttctgcc acagagggtc acacagcctg cttctctcac
     2461 acactgtgac tgtcgggaga cttctcagtt agcggtagtt cactgagctt tgatgtactg
     2521 caagggcgag cacagaaata aacggaaaac atgctgttca a
//
