LOCUS       XM_006252817             867 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus DPY30 domain containing 1 (Dydc1),
            transcript variant X1, mRNA.
ACCESSION   XM_006252817
VERSION     XM_006252817.4
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086034) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Aug 7, 2024 this sequence was replaced by
            NM_001433192.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006252817.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..867
                     /gene="Dydc1"
                     /note="DPY30 domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     36 long SRA reads, 5 Proteins"
                     /db_xref="GeneID:688433"
                     /db_xref="RGD:1588855"
     CDS             164..694
                     /gene="Dydc1"
                     /codon_start=1
                     /product="DPY30 domain-containing protein 1 isoform X1"
                     /protein_id="XP_006252879.1"
                     /db_xref="GeneID:688433"
                     /db_xref="RGD:1588855"
                     /translation="MESRYLQQCLGTCLTQGLAEVARVRPLDPIEYLALWIYKYKENE
                     SMEQLRQKELIALEHERELAMMEQEMMDRLKAEELLFQQQQLAFQLELEMQEKEKQKT
                     EDFKTEQEKSTKDTMSTESISKGEEAMPSEESMMDSGKTLAEISDRYGAPNLSRVEEL
                     DEPMLSDIALNIDQDL"
     polyA_site      867
                     /gene="Dydc1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgctctcgtt gccaggcaac gggacgcgac tcactggcgt gtggccagaa cgtgcatcgg
       61 atgcgtgcac caaggaggct ggagcgtttt ccttcgaacc ggccctctag tgtctctgca
      121 gaagcagttc taaaattttc accttgagag tcaagagtta gaaatggagt caagatacct
      181 tcaacagtgc ctggggacct gcctaactca aggtcttgcg gaagttgcaa gagttcgccc
      241 actggatccc attgaatatt tagccttgtg gatttataag tacaaggaaa acgagagcat
      301 ggagcaattg agacagaaag aactgattgc gttggagcac gagagagaat tagctatgat
      361 ggagcaggaa atgatggatc gactcaaagc agaggaactc ttgtttcagc agcagcagct
      421 ggcattccag ttggagttgg aaatgcaaga aaaagagaaa cagaagacag aagatttcaa
      481 gacagagcaa gaaaaatcca ctaaggacac gatgagcaca gagagcatat ctaagggtga
      541 ggaggccatg ccgtcagagg aatcgatgat ggactcgggc aaaaccctag cagaaatcag
      601 cgaccggtat ggggcgccta acttgagccg agtggaagaa ctggatgaac caatgttatc
      661 cgatattgcc ttaaacattg atcaagatct gtaggaccaa ccaactgaaa agaaatattt
      721 tctacctgct tcaaacttca aatcacaagg accctaagca tgtatttttc tccttccaaa
      781 cttgaactct aaccccccat acccattaat tttataaaca ggcttcaagt gtatccttaa
      841 aataaagttt agatatctca atacaaa
//
