LOCUS       NM_001025650            1155 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus dual specificity phosphatase 11 (Dusp11), mRNA.
ACCESSION   NM_001025650 XM_216196
VERSION     NM_001025650.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Sankhala,R.S., Lokareddy,R.K. and Cingolani,G.
  TITLE     Structure of human PIR1, an atypical dual-specificity phosphatase
  JOURNAL   Biochemistry 53 (5), 862-871 (2014)
   PUBMED   24447265
REFERENCE   3  (bases 1 to 1155)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 1155)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 1155)
  AUTHORS   Deshpande,T., Takagi,T., Hao,L., Buratowski,S. and Charbonneau,H.
  TITLE     Human PIR1 of the protein-tyrosine phosphatase superfamily has RNA
            5'-triphosphatase and diphosphatase activities
  JOURNAL   J Biol Chem 274 (23), 16590-16594 (1999)
   PUBMED   10347225
REFERENCE   6  (bases 1 to 1155)
  AUTHORS   Yuan,Y., Li,D.M. and Sun,H.
  TITLE     PIR1, a novel phosphatase that exhibits high affinity to RNA .
            ribonucleoprotein complexes
  JOURNAL   J Biol Chem 273 (32), 20347-20353 (1998)
   PUBMED   9685386
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098712.1.
            
            On Jul 22, 2005 this sequence version replaced XM_216196.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098712.1, SRR8487231.177551.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..1155
                     /gene="Dusp11"
                     /note="dual specificity phosphatase 11"
                     /db_xref="GeneID:297412"
                     /db_xref="RGD:1307038"
     exon            1..159
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..1045
                     /gene="Dusp11"
                     /EC_number="3.1.3.48"
                     /note="dual specificity protein phosphatase 11;
                     phosphatase that interacts with RNA/RNP complex 1; dual
                     specificity phosphatase 11 (RNA/RNP complex
                     1-interacting); RNA/RNP complex-1-interacting
                     phosphatase-like"
                     /codon_start=1
                     /product="RNA/RNP complex-1-interacting phosphatase"
                     /protein_id="NP_001020821.1"
                     /db_xref="GeneID:297412"
                     /db_xref="RGD:1307038"
                     /translation="MNQWHYGRYSRGRDFTARAPPKKKGKNQIPERWKDYLPVGQRMP
                     GTRFIAFKVPLQKKFEAKLMPEECFSPLDLFNKIQEQNEELGLIIDLTYTQRYYKVED
                     LPKTISYIKILTVGHQVPDSGTIFQFKSAVKEFLKRNKNNDKLIGVHCTHGLNRTGYL
                     ICRYLIDVEGMRPDDAIELFNRCRGHCIERQNYIENLQKRRVRKNQNASASRSGGLED
                     SAHLTEQVHTTNKPVNKGPKKSRRGGHLESSQHVQTQSSAYSFRKWSQNQSVYQRGFV
                     PPPGPAGEDYSQRRFFWSMRPNGSQATHHKKWIAASYQRPFYPASWEWNV"
     exon            160..235
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            236..367
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            368..491
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            492..552
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            553..599
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            600..675
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            676..849
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
     exon            850..1134
                     /gene="Dusp11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaggtcgct gctttggctg ctctggcacg tctggcgttg ggtgggcggc atctctgcgc
       61 ccacatgaac cagtggcatt atggccgata cagtcggggc cgggacttta ctgcccgtgc
      121 cccacccaag aagaagggca aaaaccagat cccggaaagg tggaaagact atctcccagt
      181 tgggcaacgg atgcctggga ctcgtttcat tgctttcaaa gttcctttgc aaaaaaaatt
      241 tgaagcaaag cttatgccag aagaatgctt ttctcctttg gatctcttta ataaaattca
      301 agaacaaaat gaagaacttg gattgataat cgatttaaca tatactcagc gctattataa
      361 agtagaggat ttgccaaaaa ctatttctta cataaaaatt cttacagttg gtcatcaggt
      421 acctgacagt ggcactattt ttcagttcaa aagtgcagtt aaagagtttt taaagagaaa
      481 taaaaacaat gacaaactta ttggtgtcca ctgtacccat ggcttaaata ggactggcta
      541 cctcatttgc agatatttga ttgatgtaga aggcatgagg ccagatgatg caattgaatt
      601 gttcaacagg tgccggggac attgcataga aaggcagaac tacatcgaaa acctgcagaa
      661 acgtcgtgtc agaaagaacc agaatgctag tgcatctaga tcaggtggtc ttgaagactc
      721 agcacatctt acagaacaag tccacaccac taacaaacct gtgaacaaag gacctaagaa
      781 aagccgacgt ggtggtcatc tggaatcgtc ccagcatgtt cagacccaga gctcagcgta
      841 ctcattcaga aaatggtcac aaaatcagag tgtttaccag agaggcttcg tccctcctcc
      901 cggtccagct ggagaggact attcacagag aagattcttc tggagcatga gaccaaatgg
      961 cagtcaagca acccatcata agaaatggat tgctgctagt taccagagac ctttctaccc
     1021 agcctcctgg gaatggaatg tgtgacacac tgtggctgaa ctgtcatagg ggccacctga
     1081 gatcagagct ggatagaaga cagctggatg actgttaata aaatcaggtc aaaaaaaaaa
     1141 aaaaaaaaaa aaaaa
//
