LOCUS       NM_001108431            1804 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus DTW domain containing 2 (Dtwd2), mRNA.
ACCESSION   NM_001108431 XM_001054113 XM_341614
VERSION     NM_001108431.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Takakura M, Ishiguro K, Akichika S, Miyauchi K and Suzuki T.
  TITLE     Biogenesis and functions of aminocarboxypropyluridine in tRNA
  JOURNAL   Nat Commun 10 (1), 5542 (2019)
   PUBMED   31804502
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Hasson SA, Kane LA, Yamano K, Huang CH, Sliter DA, Buehler E, Wang
            C, Heman-Ackah SM, Hessa T, Guha R, Martin SE and Youle RJ.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473971.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341614.3, XM_001054113.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132293,
                              SAMN06621351 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q11"
     gene            1..1804
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /note="DTW domain containing 2"
                     /db_xref="GeneID:361326"
                     /db_xref="RGD:1306423"
     exon            1..275
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..954
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /EC_number="2.5.1.25"
                     /note="DTW domain-containing protein 2"
                     /codon_start=1
                     /product="tRNA-uridine aminocarboxypropyltransferase 2"
                     /protein_id="NP_001101901.1"
                     /db_xref="GeneID:361326"
                     /db_xref="RGD:1306423"
                     /translation="MEPQEEARTLGESAPRPSGAWGLPTPGEEERSEGGARLAAPPAG
                     ALGDSTSADGLWGLPVEHAERRPECSRCSRPQKVCLCPYLPVRPLQISTHLYIIQHPA
                     EESKVLRTVPLLAACLPPDKCTVKIGRRFSEERDIELSTVCRDSGTLILYPGAEATNL
                     EEFILDAPVYPSTIILIDGTWSQAKDIFYKNSLFRLPKQVQLKTSICSQYVIRMQPTN
                     RCLSTLECAAAALSVLEKNSCIQETLLRPLQALCSFQLQHGAQVRLSKEYLLKNGLYP
                     KPMPKNKRKLRKMELLINSVKI"
     exon            276..366
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
     exon            367..461
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
     exon            462..654
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
     exon            655..783
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
     exon            784..1804
                     /gene="Dtwd2"
                     /gene_synonym="RGD1306423"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgccctcc ggcggcggcg ctccctcaat gcgacggcct gactcttaac accacccatg
       61 gagccgcagg aagaggcgcg aacgctcggg gagtctgcgc ctcggccttc tggcgcctgg
      121 ggattaccga cgccgggtga agaggagcgg tccgagggcg gtgcgcggct ggcggcgcct
      181 cccgcgggcg cattggggga cagcacgagt gcagacgggc tgtgggggct gccggtggag
      241 cacgcggagc gcaggccgga gtgcagccgc tgcagccgtc cccagaaagt gtgcttatgt
      301 ccatatctgc cagttcgtcc actccagatc tccacccact tgtacataat ccagcatcca
      361 gcagaggaaa gcaaagtgtt gcgcacagtc cctctgctag cagcatgcct tcccccggac
      421 aaatgcacag tcaagattgg ccgccgcttc agtgaagagc gagatattga actttcaact
      481 gtttgccggg actctggtac attaatatta tatccagggg ctgaagctac taatttggaa
      541 gaatttatat tagacgctcc tgtttatcct tccacaatca tcctcattga tggtacatgg
      601 agccaggcta aggacatttt ctataagaat tccttgttcc gacttcccaa acaggtgcag
      661 ttaaaaacga gcatttgtag tcagtatgtg attcggatgc agccaaccaa caggtgcctt
      721 tctaccctgg aatgtgctgc tgctgctctc tctgtcttgg agaagaacag ttgcatacag
      781 gagactctgc ttcgccctct tcaggctctg tgttctttcc agcttcagca tggtgctcag
      841 gttcgcctca gcaaggagta tcttctcaag aatggattat atcccaagcc tatgccaaag
      901 aacaaacgca aactcaggaa gatggagctg ttaatcaaca gtgtcaaaat ttagcacact
      961 tgtccctgcg tgctggtttt cctgtcattg gctgacaaga ctgtgttcca tcttcccagt
     1021 tctgactttt actctgaaga aggaggaacg ctggcccacc ctagtgctga aggacgaggt
     1081 ctgctccaca gcatctaatg gttcacccca ctgaccgaga agcggtttca cgctgtctct
     1141 gtttttgttt tatttttctt tttgattttt caagacaagg tttctctgtg tagcctgtag
     1201 accaggcttg cctcaaactc agagatctgg ctgcttctgc ctcccaagtt ctgggataaa
     1261 cagcatgtgc cacctttgtc cagatactgg atccgctttt aaacatgtgc ttccaataca
     1321 ttttttaaaa ggtctattca aaaaagggtt acttgttagt ctagactaag gacctgttgt
     1381 tcgtaaaatg aagaaaattt tgtctgggaa catgttcccg tcagtgttta tacataggtg
     1441 ggtgtaggtt agtgatgggg tatagccatg acactaatgc ttcagcccag tgaatgaaat
     1501 tcagagtgtg acgtagtgac acagagggct gtgtgtgtta ttcaggagga gaaaagaaca
     1561 ggaaaacttt acccttcagg gttctcctgg actcagcgaa tccacgcagt gggacttaca
     1621 tcttctctta gtggctgaat tcctgaggac tccatctaat tttgaaatag cctgtattct
     1681 caatgggaga tgctgtgcat aacttcaggt tttcagtgtc cattgaacaa gttaactggt
     1741 ggtaagaagt ttttgatgaa gtttctacat gaaaatgact gaagtaaatt ataatacagc
     1801 tatc
//
