LOCUS       XM_039112630            1360 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus D-aminoacyl-tRNA deacylase 2 (Dtd2),
            transcript variant X1, mRNA.
ACCESSION   XM_039112630
VERSION     XM_039112630.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112630.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1360
                     /gene="Dtd2"
                     /gene_synonym="RGD1309138"
                     /note="D-aminoacyl-tRNA deacylase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     ESTs, 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 56 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:366619"
                     /db_xref="RGD:1309138"
     CDS             256..585
                     /gene="Dtd2"
                     /gene_synonym="RGD1309138"
                     /codon_start=1
                     /product="D-aminoacyl-tRNA deacylase 2 isoform X1"
                     /protein_id="XP_038968558.1"
                     /db_xref="GeneID:366619"
                     /db_xref="RGD:1309138"
                     /translation="MVNTLLNVKLSETETGKHVSILDLPGDILIIPQATLGGRVKGRS
                     MQYHSNSGKEEGLELYSQFVCLCEKAVTNNSKCVEAGVAVAHGTYGNRQVLKLDTNGP
                     YTHLIEF"
ORIGIN      
        1 cggaaccatg ccggtcttcc tgtcatctat cgtgggagaa agagcttgtc cctttccgtc
       61 tacccatcct agtgggctgc ctagctgtct ctttggactt gcttctggtg gtggcctgtg
      121 cccgactggt tctctctgta gcgctcagcc tgcggatgat ctttctgcct tagtatctta
      181 agtgttgaga ttcggagagg attggtgatc tatgtgtgtt tcttcaaggg agccaacaca
      241 gaacttcttc ccaaaatggt caatacgctg ttaaacgtga agttaagtga aacggaaacc
      301 ggcaagcatg tctccatctt ggatctgcct ggcgacattc tgatcatccc ccaggccacc
      361 ctcgggggca gggtgaaagg acggagtatg caataccact caaactctgg gaaggaggag
      421 ggcttagagc tgtactccca gtttgtgtgt ctgtgtgaaa aagccgtgac caacaacagc
      481 aagtgcgtag aagcgggggt tgcagtggcg cacggcacgt acgggaacag gcaagtgtta
      541 aagctggaca ccaatggacc gtacacgcac ctcattgagt tttgaaaaat tccgtcccac
      601 cccgcttcct gtacaaaacg acctggtctg tagttagttt ttttttgttt tgttttgtat
      661 ttgtttttgt ttttgttttt tctccctcca ttcatcttga agacacagat ctgcaacata
      721 tttaggcaag aaaatccttg ctccaacctt ggcatagagt ggtacattcc tttaattcca
      781 gggcttggga ggcagaggca agcagatttc tgtgagtcgg aggtcagcct ggtctatatg
      841 tcctaggaca gccaggacta cacagagaaa ctctgtctcc taaaacaaaa cgttaaatat
      901 ttatgctggg catagtggtg catgtgcctt taattccagc acgacagagg cagaggctag
      961 agggtctctg tgagttcaag gtcagcctgg acttcattgt gagttctggg gtaggcagag
     1021 ctatatgtga gaccctgtct tgaaaaaaca aaaaactaat aaatattaaa aatttaagat
     1081 actttttaga gtgaaaagta aatgaccgga attagacatc tgagggagct gctggagtct
     1141 tccttgtgtc ctagactttc ttagcctgtg ttttgatgct ttagattcct attgctcata
     1201 caccccaaag tccacccccc cactttcata gctttcctac tgttctattt tgaaacttaa
     1261 gaatcgataa cttgagctca ttgtccttag cttttgtttt attgattcac aatacagttg
     1321 ttgaaatgta ataaactatt cataagctta gaaactccaa
//
