LOCUS       XM_039090698            2697 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dual serine/threonine and tyrosine
            protein kinase (Dstyk), transcript variant X2, mRNA.
ACCESSION   XM_039090698
VERSION     XM_039090698.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2697
                     /gene="Dstyk"
                     /gene_synonym="DustyPK; Ripk5"
                     /note="dual serine/threonine and tyrosine protein kinase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 30 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:304791"
                     /db_xref="RGD:735051"
     CDS             53..2542
                     /gene="Dstyk"
                     /gene_synonym="DustyPK; Ripk5"
                     /codon_start=1
                     /product="dual serine/threonine and tyrosine protein
                     kinase isoform X1"
                     /protein_id="XP_038946626.1"
                     /db_xref="GeneID:304791"
                     /db_xref="RGD:735051"
                     /translation="MEEKYLQQIVDHLPCILILGQDCNAKCQLLNLLLAVRVLPTLKL
                     DSDESCKLRRLRFTYGTRTQVSLALPGQYELVHTLASHQDNWETIPEEDLEVQEDSED
                     TARVLADLEVTMHHALLQEVDIVVAPCHSHRPAVDVLSDLANDFLPVITYALHKDELS
                     ERDEQELQEIRKYFSFPVFFFKVPTLEIIRSSSGRADSERSPLSGQLMDLGYLSSSHR
                     NCMASDQDCRAQSMLVEQSEKLRQLSTFSHQLLQTRLVDAAKALNAVHSHCLDIFINQ
                     AFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDD
                     AANMEFKDVIVPENGETVGTREIKSCIRQIQELIISRLNQAVANKLISSVDYLRESFV
                     GTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQ
                     RITWVNPPTITLEWKRKVAQEAIDSLSASKLAKSICSQFRTRLNSSHEAFAASLRQLE
                     AGHSGRLEKTEDLWLKVRKDHAPRLARLSLESRSLQDVLLHRKPKLGQELGRGQYGVV
                     YLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGG
                     GSSVAVLLIMERLHRDLYTGLKAGLSLETRLQIALDVVEGIRFLHSQGLVHRDIKLKN
                     VLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWY
                     ICSGSIKLPEAFERCASKDHLWNNVRRGTRPERLPVFDEECWQLMEACWDGDPSKRPL
                     LGIVQPILRSIMDRLCKCDSERPSRGLDDST"
ORIGIN      
        1 ggatcacttt aaaaggagtt gaggccagct gagctgcatt tcctttccac ctatggaaga
       61 gaagtatctg cagcagatcg tggatcacct cccctgtata ctgatcctcg gccaggactg
      121 taatgccaag tgccagctgt tgaacctgct gttggcggtg cgggtgcttc ccaccctcaa
      181 gctggacagt gacgagagct gtaagcttcg gcgcctccgc ttcacctacg ggactcggac
      241 tcaggtcagc ctggcgctgc ccggtcagta tgagctggtg cacacactgg cttcccacca
      301 ggacaactgg gagaccatcc ctgaggagga cctggaggtt caagaagaca gtgaggacac
      361 tgcccgtgtg ttagctgacc ttgaggtgac aatgcaccat gctctcctac aggaagtgga
      421 cattgtggtg gcaccatgcc acagccaccg gcctgcagta gatgttctga gtgacttggc
      481 aaatgatttc ttgcctgtga taacctacgc acttcacaaa gatgaactct ctgaacggga
      541 tgagcaagag cttcaggaaa ttagaaagta tttctcgttt cctgtgttct tcttcaaagt
      601 acctacactg gagatcatcc gctcttccag tgggcgagca gacagtgaac gatcaccact
      661 gtctgggcag ctaatggacc tgggctacct gagcagcagt cacaggaact gcatggcctc
      721 tgaccaggac tgcagagctc agagcatgtt ggtggagcaa agtgagaaac tgaggcagct
      781 gagtacgttt tctcaccagc tgctacagac ccgcctcgtg gatgcagcca aggccctgaa
      841 tgcggtgcac agccactgcc ttgacatctt tattaaccag gcttttgaca tgcagcggga
      901 cctgcagatc actcccaaac gcctagaata tactagaaaa aaggagaatg agttgtatga
      961 gtcattgatg aatatcgcca accgaaagca agaggaaatg aaggatatga tcgttgagac
     1021 acttaacacc atgaaagagg agcttctgga tgatgctgcc aacatggagt tcaaagatgt
     1081 cattgtccct gagaatggag agacagttgg gaccagagag atcaaatcct gcatccgaca
     1141 gatccaggag ctcatcatct ccagacttaa ccaggcagtg gccaacaagc tcatcagctc
     1201 tgtggattac ctacgggaaa gcttcgtggg gaccctggag cggtgtctac agagccttga
     1261 aaagtcacag gatgtctcag tgcacattac cagcaattat ctcaaacaga tcttaaatgc
     1321 cgcttaccat gttgaagtca cttttcactc ggggtcctca gttacacgga tgctttggga
     1381 acaaatcaag cagatcatcc agcgtatcac atgggtgaat ccacccacca tcaccctaga
     1441 gtggaagagg aaggtggccc aggaagccat cgacagcctc agtgcctcca aactggccaa
     1501 gagcatttgc agccagttcc gtactcggct caatagttcg cacgaggctt ttgcggcctc
     1561 cttgaggcag ctggaagctg gccattcagg ccgtctggag aaaactgaag atctgtggct
     1621 taaggttcga aaagaccacg ccccccgtct ggcccgcctt tcactagaga gccggtcttt
     1681 acaggacgtc ttgcttcacc gtaaacctaa attaggacag gaactaggcc ggggccaata
     1741 tggtgtggtg tacctgtgtg acaactgggg gggacacttc ccttgtgccc tcaagtcagt
     1801 tgttcctcca gacgagaagc actggaacga cctggcgttg gagtttcact acatgaggtc
     1861 tttgccaaag catgagcggc tggtagatct ccatggctca gtcattgact acaactacgg
     1921 tggcggctcc agcgttgctg tgttgctgat tatggagcgg ctgcaccggg acctctacac
     1981 agggctgaag gctgggcttt ccctggagac acgtttgcaa atagctctgg acgtggtgga
     2041 gggaatccgc tttctgcaca gccaggggct tgttcatcgg gatatcaaac tgaaaaatgt
     2101 gctgctggac aaacaaaacc gtgccaagat cactgactta ggattctgca aaccagaagc
     2161 tatgatgtca ggcagcattg tgggaacacc gattcatatg gcccctgaac ttttcacagg
     2221 aaagtatgat aattctgtgg acgtctatgc ttttgggatc cttttctggt atatctgctc
     2281 cggctctatc aagctccctg aggcatttga gaggtgtgcg agcaaagacc atctctggaa
     2341 taatgtgcgc agagggaccc gtccggagcg tcttcctgtg tttgatgagg agtgctggca
     2401 gttgatggag gcctgttggg atggtgaccc ctccaagagg cctctcttgg gcattgtcca
     2461 acctatactc cgaagcatta tggaccggct ctgcaagtgc gattctgagc ggcctagcag
     2521 aggactagat gactctacct gaagacaaca cccgtctctt ccactctgtt ccttccttcc
     2581 ctctcacctt ttggccttgg ggagaatttg tcatttgttc actaagggag ctcccaaggg
     2641 aactggtgct tgttggcagc ttgaggcctt cttgggtaga gacggctcct gggcagc
//
