LOCUS       NM_001305236            1527 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus DNA replication and sister chromatid cohesion 1
            (Dscc1), mRNA.
ACCESSION   NM_001305236
VERSION     NM_001305236.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Terret,M.E., Sherwood,R., Rahman,S., Qin,J. and Jallepalli,P.V.
  TITLE     Cohesin acetylation speeds the replication fork
  JOURNAL   Nature 462 (7270), 231-234 (2009)
   PUBMED   19907496
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Watrin,E., Schleiffer,A., Tanaka,K., Eisenhaber,F., Nasmyth,K. and
            Peters,J.M.
  TITLE     Human Scc4 is required for cohesin binding to chromatin,
            sister-chromatid cohesion, and mitotic progression
  JOURNAL   Curr Biol 16 (9), 863-874 (2006)
   PUBMED   16682347
REFERENCE   3  (bases 1 to 1527)
  AUTHORS   Bermudez,V.P., Maniwa,Y., Tappin,I., Ozato,K., Yokomori,K. and
            Hurwitz,J.
  TITLE     The alternative Ctf18-Dcc1-Ctf8-replication factor C complex
            required for sister chromatid cohesion loads proliferating cell
            nuclear antigen onto DNA
  JOURNAL   Proc Natl Acad Sci U S A 100 (18), 10237-10242 (2003)
   PUBMED   12930902
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.428798.1,
                                           SRR26643429.27485.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-460               JAXUCZ010000007.1  88387514-88387973   c
            461-629             JAXUCZ010000007.1  88384879-88385047   c
            630-764             JAXUCZ010000007.1  88382506-88382640   c
            765-855             JAXUCZ010000007.1  88381849-88381939   c
            856-994             JAXUCZ010000007.1  88380660-88380798   c
            995-1047            JAXUCZ010000007.1  88379502-88379554   c
            1048-1202           JAXUCZ010000007.1  88378677-88378831   c
            1203-1351           JAXUCZ010000007.1  88376268-88376416   c
            1352-1527           JAXUCZ010000007.1  88372349-88372524   c
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q32"
     gene            1..1527
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /note="DNA replication and sister chromatid cohesion 1"
                     /db_xref="GeneID:299933"
                     /db_xref="RGD:1561749"
     exon            1..460
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     CDS             261..1460
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /note="defective in sister chromatid cohesion 1 homolog"
                     /codon_start=1
                     /product="sister chromatid cohesion protein DCC1"
                     /protein_id="NP_001292165.1"
                     /db_xref="GeneID:299933"
                     /db_xref="RGD:1561749"
                     /translation="MPGPTAPRRTREEVDATLQVAKLNAAELLPTVHCLSFGSGTSGA
                     ATGDFCLLELEPALCQQLEAGDSFVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIP
                     GCKTPDQLKGEETQSNIVHTEIFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQK
                     EEDPSRSKYTTEDLLNQIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQ
                     LVDSESWSFNKVPLNVCLQELGPLEPEEMIEHCLKCYGKKYVDKGEVYFELNADKVCR
                     ATAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRSSRPEIIFLFKVD
                     ALPEGTQDRFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSRSSMQNGVKVY
                     NSRRLIS"
     exon            461..629
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            630..764
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            765..855
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            856..994
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1047
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1202
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            1203..1351
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
     exon            1352..1527
                     /gene="Dscc1"
                     /gene_synonym="RGD1561749"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttggtcccgc agggacacag aattgctaac acaacctttc tggtctcctc cgggaaaccg
       61 tgctttcccc taagcaatct agggcttgca cattatgagc aaactgcttt gggacacggg
      121 agtctggatg ctttccgact ttctcgggac acgccctact ccacttcgcc ccgccccgga
      181 agttgactcc agcgggtttt ggcgcgcttt ccgagtcccg ggagttcggg tcgatgacac
      241 gcctttctcc gtgctgcggg atgcccggac cgaccgctcc acggaggacc cgcgaggaag
      301 tggacgcgac gctgcaggtc gccaagctaa atgccgccga gttgctgccc actgtgcact
      361 gcctgagctt cggctccggg accagcggcg cggccaccgg cgacttctgc ctgctggagc
      421 tggagccagc actgtgccag cagctggagg ccggggacag ttttgtgatt cgaggagata
      481 aggatgaaca ggctgtgttg tgcagtaaag acaaaaccta cgacttgaag atcgcagaca
      541 catccaacat gctgcttttc atccctggtt gcaaaactcc agaccagctg aagggggagg
      601 aaacacagag taacatcgtt cacacagaga tctttggttt ctctaataat tattgggaat
      661 taagaagatg cagacctaag ttaaaaaagt taaagaaact tctaatggaa aatacctacg
      721 aaggccctga cagtcagaaa gaggaggatc caagccgctc aaaatataca actgaagatt
      781 tgcttaatca aattcaggca agtgaggaag agataatggc ccagctacaa gtcttaaatg
      841 cctgtgagat tggaggttac tggaggattc ttgaatttga ttatgagatc aaacttctga
      901 atcatgtaac tcagcttgtg gattctgaat cttggtcttt taataaagtc cccttgaatg
      961 tatgcctgca ggaacttgga cctttagagc cagaggaaat gattgagcac tgtcttaaat
     1021 gctatggaaa gaagtacgtg gacaaaggtg aagtctattt tgaattgaat gctgacaaag
     1081 tatgtagagc gaccgcggag atgctgctgc agaatgccgt gaagtttaac ctcgctgagt
     1141 ttcaggaagt gtggcagcag agtgttcccg aggggatgac aactcggctg gatcagctca
     1201 agggtttagc actggtggat agaagctcaa gaccagaaat catatttttg ttcaaagtag
     1261 atgctttgcc cgagggaaca caggatcgtt ttaacagtct attctctcta agagaaaagt
     1321 ggacggaaga agacattgct ccatatatcc aagatttgtg tggagagaag caaactatag
     1381 gtgcgttgct tactaaatat tctcggtctt caatgcaaaa cggcgtgaaa gtttataatt
     1441 caaggagact catttcttaa aaggacatac tgaattgctt tataaagttg ctgggtacaa
     1501 taaaaacaat tcttttggct attttta
//
