LOCUS       XM_006242722            3564 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dpy-19 like 2 (Dpy19l2), transcript
            variant X1, mRNA.
ACCESSION   XM_006242722
VERSION     XM_006242722.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242722.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006242722.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3564
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3564
                     /gene="Dpy19l2"
                     /note="dpy-19 like 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:300461"
                     /db_xref="RGD:1564311"
     CDS             153..2525
                     /gene="Dpy19l2"
                     /codon_start=1
                     /product="probable C-mannosyltransferase DPY19L2 isoform
                     X1"
                     /protein_id="XP_006242784.1"
                     /db_xref="GeneID:300461"
                     /db_xref="RGD:1564311"
                     /translation="MVGQTRSKLRDASPDGPQSSRTGQARRRRSAGTVEPQQERSAPQ
                     ERTKWSLLQHFLLGGRKLPSGARNYAARRIRNLNAQNYFPLEEVTKILLHDRFQFLHT
                     LLDHFREKVQALQIHRFSHRTLFGVAAFVGILHWLHLITLFENDRHFSHLSSLEREMT
                     FRTEMGLYYSYFKTIIEAPSFLEGLWMIMNDRLTEYPLVINTVKRFHLYPEVIIAFWF
                     RTVIGILNLFGIESKTCWNVTRMEPLNEVQSCEGLGDPACFYIGVIFILNGLMMGLFF
                     IYGTYLSGSQLGGLITVACYFFNHGEATRVMWTPPLRESFSYPFLVLQMYVLTTILRA
                     STIHKKHYIALCFSNVAFLLPWQFAQFILFTQIASLFPMYVVGYIEPSKFQKIIYINM
                     GSVALCFILMFGNPMYLSSYYSSCLIVSWAILQKKNKIQKLVASELQFWLAQGCAWWC
                     GTIILKFGTSKICGVSDHIRLSDLIAARILRYTDFDTLIYTCAPEFDFMERATPLRYT
                     KTLLLPLVLVITYLIFKMIVRDILCVLYTNTYQRILTRNESLKFKFYQDLRKQLLDNG
                     ELIFHALQLLAFMGLAILIMRLKLFLTPHMCLMASLICSRRLFGWLFCRIHFENVVFG
                     ILTMMSIQGCANLHNQWSIMGEFTNLPQEELIHWIRHNTRPDAVFAGAMPTMASIKLS
                     TLHPIVNHPHYEDADLRARTKIVYSAYSRKPAVEVRNKLLELHVNYYVLEEAWCVVRT
                     KPGCSMLEIWDVEDPSNAANPPLCSILLKDSRPYFTTVFQNSMYRVLKIN"
ORIGIN      
        1 tcgccatcct tgtttcacgg tcgccttgac gacgaggctg cccgcaacgg cggcgcgggc
       61 tggtcgttga ggctgcctgg tggtgtgtcc ggcccccgga cctcgccctg cggtgaccca
      121 gctccatcca cctgaacacg ggctatgaga agatggtggg gcagacgagg agtaagctca
      181 gggatgcgag ccccgacggg ccacagtcct cccgcacggg gcaagcgagg aggaggcgga
      241 gcgcagggac agtggagccc cagcaggagc gcagcgcgcc tcaggagagg acgaagtggt
      301 ccttgctgca gcatttcctc ctagggggca ggaaactgcc ctcgggcgcc cgcaactacg
      361 cggcgcggag gatccgaaat ctgaacgcac agaattactt tcccctggaa gaggtcacca
      421 agatccttct tcacgaccgc ttccaattcc tccacactct cctggatcac tttcgcgaaa
      481 aggtgcaggc cctgcagatc catcgcttct cccacaggac cctctttggc gtagctgcct
      541 ttgtggggat tttgcactgg ttacacttaa taacactttt tgaaaacgac cgccattttt
      601 ctcacctctc atccttggaa cgggagatga cttttcgcac ggaaatggga ctttattatt
      661 cctacttcaa gaccatcatc gaagcacctt cgtttctaga aggattgtgg atgatcatga
      721 atgacaggct aactgagtat cccctggtaa tcaacacagt gaaacgtttc catctctacc
      781 cagaggtgat catagccttt tggttccgca cagtcatagg gatattgaat ttatttggga
      841 tagaaagtaa gacctgctgg aacgtcacca gaatggagcc tcttaatgaa gttcagagct
      901 gtgaaggatt gggagaccca gcttgctttt acattggagt aatttttatt ttaaatgggc
      961 taatgatggg cttgttcttc atctacggta catacctgag cgggagtcag ttaggaggtc
     1021 tgattacagt agcctgttac tttttcaacc atggagaggc cacccgcgtg atgtggacac
     1081 cgcctctccg ggaaagtttc tcctatccat tccttgtact tcagatgtat gttttgacaa
     1141 ctatcctcag ggcctccacc atccacaaaa aacactacat agcgctctgc ttctccaatg
     1201 tcgctttcct gcttccttgg cagttcgctc agtttatact ttttacccag atagcctcgt
     1261 tatttcccat gtatgttgtg gggtacattg agccaagcaa atttcagaag atcatttata
     1321 tcaacatggg ttcggtagcc ctgtgcttca ttttgatgtt tgggaaccca atgtacttaa
     1381 gttcttatta ttcctcgtgt ttgatagtgt catgggcaat actgcaaaag aaaaacaaaa
     1441 tccaaaaatt ggtagcttct gaactccagt tttggctagc ccaaggctgt gcttggtggt
     1501 gtggaacaat tattttgaaa tttgggacat ctaaaatctg tggtgtttca gaccatattc
     1561 gcctgagtga ccttatagca gccagaatcc taaggtacac agattttgat accttaatat
     1621 acacctgtgc tcctgaattt gacttcatgg aacgagcgac tccactgaga tacacaaaaa
     1681 cattattgct tccacttgtc ctagtgatta cttatcttat ctttaaaatg attgttcgtg
     1741 atatcttatg tgtcttgtat acaaacactt atcagagaat tttaacacgg aatgaaagtc
     1801 tgaagttcaa gttttatcaa gacttgagaa aacagctcct ggacaacggt gagttgattt
     1861 tccacgcctt gcagttgctg gcattcatgg gtcttgccat cttaatcatg cggttgaagc
     1921 tgtttctgac acctcacatg tgccttatgg cttccttgat ctgctcccga aggctctttg
     1981 gctggctttt ttgcagaatt cattttgaga atgttgtctt cggcattctg acaatgatgt
     2041 caatacaagg ttgtgcgaac ctccacaacc agtggagcat aatgggagag ttcactaact
     2101 tgcctcagga agagctcata cactggatcc ggcacaacac caggccagac gctgtctttg
     2161 caggcgccat gccgacaatg gcaagcatca agctgtctac actgcatccg attgtgaacc
     2221 acccacacta tgaggatgca gacttgaggg ctcgaacaaa aatagtttat tctgcatata
     2281 gtcgaaaacc tgcagtagaa gtgagaaata aactgttgga attacacgtg aattattatg
     2341 ttctagaaga ggcatggtgt gtggtgagaa caaaacctgg ttgcagtatg cttgaaatct
     2401 gggacgtgga agacccgtcc aacgcggcta accctccgct ctgtagcatc ctgctcaagg
     2461 attcccggcc atacttcacc acagtgtttc agaatagcat gtacagggta ctgaagatca
     2521 actgacatca aggagccccg acagtctgca gtgcgaaggc gtatgtccaa aacggacact
     2581 tccagcctca tttacaacaa taagaaccac aaactttact aagagacact ttagagccat
     2641 aaacaattac ttaaatttct ctggttacta ctaatgataa attactgcat tgtttacatt
     2701 aaatgccagt ctgtcaggct tacctcataa atgattaagt catcttctat ctcattaaca
     2761 tatgttcatt ttagagttcc aagggaacat gtatagaaaa tatcaatata attttagaaa
     2821 tcaaagtaat tccctttcag tccagctagg agagttgctt caggtttccc tcgtacctat
     2881 gggtcagccc agaccctctg agccatggag aagagcacag gctctgagaa acctaatggt
     2941 ggttgtagcc tcacttattt ttagtttatg atgaagatgg gattgcttta taaattttat
     3001 ttcccaataa aaagctacct atcaaaaatg ctttgaaaat cggtaaatta ccttgaagac
     3061 aaagtggggc catcaaagag taaaattgtc tatttttttt taagatgaac cttaaacatg
     3121 ctagatgttt gcatatgcat ctgctccgag ttaagcaccg tggagttttt atacttatat
     3181 tttccttgta ctttttggtc agccataaaa gatgattcaa ttccataggt tatatacata
     3241 taattactta cagtaggtga gcaattatat tctaactata gttggaaaac attttaatgc
     3301 tgaacacaaa atagctaata aagaacgctg tattttaaca tttgcaagtc atttcttttc
     3361 tgtgtggagc aaagacagga acagatataa cagtcattaa aaaagtaaca tgctttggac
     3421 agtgtcacca gagggatatt ttaaagtaat tatcagaagt caacagaagt gatgttaacc
     3481 cataaaatgc tccatgcaca taattctgtc ccatgaactt ttgttatctt catgtacaat
     3541 gcctattaaa tcattttaaa tgtc
//
