LOCUS       NM_001191791            4663 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus dpy-19 like C-mannosyltransferase 1 (Dpy19l1),
            mRNA.
ACCESSION   NM_001191791 XM_235970
VERSION     NM_001191791.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4663)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            [WARNING] On Apr 29, 2024 this sequence was replaced by
            NM_001191791.2.
            
            On Jul 17, 2010 this sequence version replaced XM_235970.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.32828.1,
                                           SRR26643298.43232.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760476 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-292               JAXUCZ010000008.1  31297028-31297319   c
            293-317             JAXUCZ010000008.1  31278123-31278147   c
            318-405             JAXUCZ010000008.1  31277441-31277528   c
            406-543             JAXUCZ010000008.1  31274767-31274904   c
            544-664             JAXUCZ010000008.1  31271745-31271865   c
            665-758             JAXUCZ010000008.1  31271004-31271097   c
            759-816             JAXUCZ010000008.1  31255157-31255214   c
            817-908             JAXUCZ010000008.1  31251786-31251877   c
            909-1008            JAXUCZ010000008.1  31248754-31248853   c
            1009-1086           JAXUCZ010000008.1  31246104-31246181   c
            1087-1173           JAXUCZ010000008.1  31238397-31238483   c
            1174-1233           JAXUCZ010000008.1  31236891-31236950   c
            1234-1314           JAXUCZ010000008.1  31236377-31236457   c
            1315-1416           JAXUCZ010000008.1  31230338-31230439   c
            1417-1488           JAXUCZ010000008.1  31228294-31228365   c
            1489-1538           JAXUCZ010000008.1  31225842-31225891   c
            1539-1563           JAXUCZ010000008.1  31222049-31222073   c
            1564-1683           JAXUCZ010000008.1  31220603-31220722   c
            1684-1858           JAXUCZ010000008.1  31218958-31219132   c
            1859-1958           JAXUCZ010000008.1  31218214-31218313   c
            1959-2084           JAXUCZ010000008.1  31217086-31217211   c
            2085-3510           JAXUCZ010000008.1  31210178-31211603   c
            3511-4663           JAXUCZ010000008.1  31209025-31210177   c
FEATURES             Location/Qualifiers
     source          1..4663
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..4663
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /note="dpy-19 like C-mannosyltransferase 1"
                     /db_xref="GeneID:315496"
                     /db_xref="RGD:1305822"
     CDS             1..2241
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /note="protein dpy-19 homolog 1; dpy-19 like 1; probable
                     C-mannosyltransferase DPY19L1; dpy-19-like protein 1"
                     /codon_start=1
                     /product="protein C-mannosyl-transferase DPY19L1"
                     /protein_id="NP_001178720.1"
                     /db_xref="GeneID:315496"
                     /db_xref="RGD:1305822"
                     /translation="MVLQARSKHRDAAPRPPRPARSSPPPLNGASEVAARELGPERAP
                     PSPGRRSTASRKGPRAETAAPAPDGLAGRLAAGLHWALGLRRGRGRTWSTLLLASFAA
                     LLHWSHITQLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLSGVWMIMN
                     DRLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIE
                     SCEGLGDPACFYVAVIFMLNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRV
                     MWTPPLRESFSYPFLVLQMLLVTHILRTTQLYRGSLIALCISNVFFMLPWQFAQFVLL
                     TQIASLFAVYVVGYIDTYKLQKIIYTHMISLVLCFVLMFGNSMLLTSYYASSLVIIWG
                     MLAMKPQFLKMNVSELSLWVIQGCCWLFGTVTLKSLTSRIFGIADDAHIGNLLTSKFF
                     SYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLPVVLAIVAAIGRKIINDMRGVIANQ
                     ETDVRKHQVDHGELVYHALQLFAYTALGILIMRLKLFLTPHMCVMASLICSRQLFGWL
                     FGKVHPGAVVFAVLAAMSIQGSANLQTQWNIVGEFSNLPQEELIEWIRHSTKPDAVFA
                     GAMPTMASVKLSALRPVVNHPHYEDAGLRARTKIVYSMYSRKAPEDVKKELIKLKVNY
                     YILEESWCIRRSKPGCSMPEIWDVEDPDNAGKTPLCNILVKDSKPHFTTVFQNSVYKV
                     LEVIRQ"
     exon            1..292
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            293..317
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            318..405
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            406..543
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            544..664
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            665..758
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            759..816
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            817..908
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            909..1008
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1086
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1087..1173
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1174..1233
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1234..1314
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1315..1416
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1488
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1489..1538
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1539..1563
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1564..1683
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1684..1858
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1859..1958
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            1959..2084
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
     exon            2085..4663
                     /gene="Dpy19l1"
                     /gene_synonym="RGD1305822"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtcctgc aggcgcggag caagcaccgg gacgcggctc ccaggccgcc ccggccggcc
       61 cgctcgtcgc cgccgccact gaacggggca tccgaggtgg ccgctaggga gctgggaccg
      121 gagcgcgcgc cgccgtcgcc ggggcgcagg agcacggcaa gcaggaaggg gccccgcgca
      181 gagaccgctg cgcccgcccc ggacggcctc gcgggccgcc tggcggccgg gctgcactgg
      241 gcgctgggcc tgcggcgcgg gcgcggccgg acctggagca cgctgctgct agcttccttt
      301 gcagccctat tgcactggag ccacataacg cagctctttg aaaatgatcg gcatttttct
      361 cacctctcga cgctggaaag ggagatggct ttccgcactg aaatggggct gtattattct
      421 tacttcaaga ccatcgtgga ggcgccgtcg tttttgagtg gggtatggat gataatgaac
      481 gacaggctaa ctgagtaccc cctagttatc aacaccttaa aaaggttcaa cctttacccc
      541 gaggtgattt tagccagctg gtaccggatt tataccaaaa taatggattt gattggtatt
      601 caaaccaaga tatgctggac agtcacccga ggagaaggac tcagtccaat cgaaagctgt
      661 gagggactgg gcgatcctgc ttgcttttat gttgctgtaa tttttatgtt aaatggatta
      721 atgatggcac tattcttcat atatggcaca tatttaagtg gcagccgatt gggaggcctg
      781 gtcacagtgc tgtgcttctt tttcaatcat ggagagtgta cccgagtgat gtggacgccg
      841 cctctccgag aaagcttctc atacccattc cttgtacttc agatgttgct tgtgactcat
      901 attctcagga ctacacaact ttacagaggg agtttgattg cactctgcat ttccaatgta
      961 ttcttcatgc ttccttggca gttcgcccag tttgtgcttc ttactcagat tgcatcatta
     1021 tttgcagtgt atgtcgtggg atacattgat acatataagt tacagaagat catttacaca
     1081 catatgattt cccttgtgct ttgttttgtg ttgatgtttg ggaactcgat gttacttaca
     1141 tcttactatg catcctcttt ggtaattatt tggggcatgc tggcaatgaa accacagttc
     1201 ctaaaaatga atgtgtctga actcagcttg tgggttatcc aagggtgttg ctggttgttt
     1261 gggacggtca cactcaagag tctgacttcc aggatctttg gcattgcaga tgatgctcat
     1321 attggcaact tattaacatc aaaattcttc agttacaagg attttgatac tttactgtat
     1381 acttgtgcag cagagtttga cttcatggag aaggagactc cactgagata cacgaagaca
     1441 ctgctgctcc cggtcgttct cgccatcgtc gctgccattg gtaggaagat tattaatgat
     1501 atgcggggtg tcatagctaa ccaagagaca gatgtaagaa aacaccaagt tgatcatgga
     1561 gagttggttt accacgctct gcagctgttt gcatacacag ccctcggtat tctgatcatg
     1621 agactgaagc tcttcctcac accacacatg tgtgttatgg cgtccttgat ctgctccaga
     1681 cagctgtttg gatggctctt tggcaaagtg catcctggtg ctgttgtctt tgctgtatta
     1741 gcagcaatgt ctattcaagg ttctgcaaac ctacagaccc agtggaacat tgtaggggag
     1801 ttcagcaact taccacaaga agagctcata gaatggatca gacacagcac aaaaccagat
     1861 gcagtgtttg caggcgctat gcccaccatg gcaagtgtga agctctccgc tctccgaccc
     1921 gtggtgaacc acccacatta tgaagatgca ggtctaagag ccagaacaaa aatagtatat
     1981 tcaatgtata gccgaaaagc acctgaggac gtgaagaagg aattgataaa attaaaagtg
     2041 aattattaca ttctggaaga gtcatggtgc ataagaagat ccaagcctgg gtgcagcatg
     2101 cctgaaatct gggatgtgga ggatccggac aacgctggga aaacacccct gtgtaacatc
     2161 ttggtgaagg attccaagcc tcactttacc acagtgttcc agaacagtgt ttacaaagtc
     2221 ctagaagtta tcagacagtg actgcacggg cacctgccag agaccacatc agtaatggct
     2281 ttactgcttt gccactaact cagattgcaa accttttaaa agtctctcaa agtaactgtt
     2341 ttcaaatggc aaacatttga tttgatcaat ttgccagtct gattgtaaaa atgacttaca
     2401 ccagatcgat tagttactgt ttcaatgcac ctgttaaaat ttgctatgca aatgagtata
     2461 tgcttgtact tggtttaaat atttgtgtta cggtgaacaa agccatctgt gtagaaatac
     2521 atcatggatc ttgatgaaac tgtagtcact tctggactgg ttagggccgt taccaccctg
     2581 cttcctgttt acctcctggt cgctgaccac gtcagtgagt ctgtgactcc tggtcttgtc
     2641 agatgcctca gctctcagtc caggcatagc tggccctgtt cacctcactt ccgggtgctc
     2701 tttttgttct gtgttgctct tgtgaactgg gtgtcctgcc tgttgttacc cagactcctg
     2761 ggtatggtgg cgagggccag ctcctgtagg ttccagccac gtggtggtgt ttctccgcag
     2821 acagactggt ttcttttcca cataaatgtg atcttctctt taggttgact agcaagtgct
     2881 tattcttggt taaaaaatta gtaattgagt atttttctca tttttagtat taatcaaata
     2941 ttatatttta atacctttaa ttcatttaaa aatttttatg attaatcaca cttttaggaa
     3001 aaactatttt ggacaacccc aaatatgatg catctatagc ttgatatata tatagagaga
     3061 gatagcttat ggtggactgt agtttatgct aattttactt tcagtattaa gataaaataa
     3121 aatccaagta acttctgtca aaatgtaaat gaacagtttt ttattttgct ttcaaaattg
     3181 cctgtcttta ataagacaaa gctttaagcc ttataatttt gcctcaaaaa aaaaaaaaat
     3241 ctcagtgtga ggagtgctta tgctcgatct tctccagcgt gtccttgttt tttgggtttt
     3301 ttgagttttt ttgtttttta attcgcaaat atgcttcaaa tttcttatac gaattttgtt
     3361 tcttaaaagt taatttgtgt gaaatgagat acttcaaaac cataatcttc attgttgtaa
     3421 gaaatggttt tgaggtttta aattctaaac aaactgtgac catggctgac tacacattta
     3481 attatacagt cttctcttta tcaaccgcag gcagattaac ctcagtgtgg attgtccttg
     3541 agacctgaac cctcagggat ggcttccggt gcctactcct ggcagcctcg gaagagccct
     3601 tctctttctg ccttcttccc agagcccaag gacaagcttg tctgggggca ttggtcacct
     3661 gcaaagacag acagcacttg caactgagga gcgaggcctc agtgaggagc cggcctcacc
     3721 agccagggtc ccctccctga agctgcccgg ggacggccgt tcccactgtt gcagactggc
     3781 caagcttcct catctgacgt ttagttttat ttcataagct tttccaactc agaaaacggg
     3841 agcggctgga ggtcatggtt taggagtgct tgagcgatga cgtgctaatg cagaagaatg
     3901 gaaacaggga caggcgtggg tgggaaggac actctccctg tctcctgcac agccattctg
     3961 cagcccaaca tggctgctgt gtggatacag cagttaggat tttttttaat caccttttaa
     4021 aagttatttt ctgtccttac cctctaacaa ttcccttcac aataagttca cgtgtgatga
     4081 tgggaaattc tgtacagaga aacaaaatat taaaatacta ttagagccag ttcacacact
     4141 gggaaacatt aaaagtagtc taaattagtt tctctgcaga aaccttttgt aagtgtgtct
     4201 tatgtaactc caccagcaag ctctgcttgt gtgccaggaa ggcagcttgg agctgaggcc
     4261 gtggggtccc ctgtgtgcct ggcctccagc acgtggtggc agccagtgct ctgcggcgta
     4321 aacactttgg cagcctggag cagtgatagg ttttatgtag ctgacagtgc agtattaaag
     4381 ctcagtgttc tgcatagttt ttgcttcagt gtgaggaagg aagggaagac gggaggcaat
     4441 cgaatagtta ttattgtgac attaaaaaag tgagctggga aatccgtcca ttaaaacata
     4501 aacctctaaa atgcctggca gagtgtgtgc cagcagcacg aggagaaaac gggaggatgt
     4561 gtctgaaaaa agcagtcctg cacagaagta ttgtattttt atgaatttta tgccccttgt
     4621 ttacatgtac tatatatgtt aaataaaaaa aaaatccatg aaa
//
