LOCUS       XM_236761               1443 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus developmental pluripotency associated
            5 (Dppa5), mRNA.
ACCESSION   XM_236761
VERSION     XM_236761.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_236761.6.
            
            On Jan 21, 2021 this sequence version replaced XM_236761.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1443
                     /gene="Dppa5"
                     /note="developmental pluripotency associated 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:301101"
                     /db_xref="RGD:1305838"
     CDS             861..1211
                     /gene="Dppa5"
                     /codon_start=1
                     /product="developmental pluripotency-associated 5 protein"
                     /protein_id="XP_236761.1"
                     /db_xref="GeneID:301101"
                     /db_xref="RGD:1305838"
                     /translation="MATLVTRKDIPPWVKVPEDLKDPEVFQVHTLVLKSLFGPQGSRM
                     PHIEQVSRAMFELKILESSGLTEVLIYGSCNHKLRAKWMLQSMAERYRLRQERGMLKL
                     EEAMKTLELGQCLE"
ORIGIN      
        1 acaataaaat gatggcctaa gctgttacta aaaacctgct gaaaggactt cacatgatac
       61 caggctttgc tgggcctggg cttcatcata agccataact gaaatcatct ccacgccagt
      121 gaacccaaat ggctccagat ttgtttgaaa tactgttttt aatagtgaat aagccaagtt
      181 taattcagtc gctcacctga agcctagacc agtttggagt gaagggggca ggcaaggaac
      241 acgtgacctt tgaatttcag gttagttcaa aacatccgaa ccaggacctt taaggaagat
      301 agtgggcaca ctttaaaggc acctagagct tttagtgaaa agaacgagat cccaaacttc
      361 ctttcatttt cattaaacgg caagaattat tgttgagttg ttgggagttg ctctgacttc
      421 ccacaaaatg aggcctcagg atccgattct ttccggatgg ggaaagctag tcttttagaa
      481 gtctttgaac cttcccatgg attccttagt tttcggggtt cagaccccat tggttatttc
      541 tcagaggaag gtcatcagca ctgacttcta ttcccaagat ccccacccct ggatttggaa
      601 aaacaaggca gtacagggac aaacctagtt agcttggatc agctggacag ggaggcctgg
      661 ggcctggatt cgtctcccag gagcacagcc tgagagtaca gtctgagatt gggccccgta
      721 gtgggcgggc cctggtaggc gtggtctcgt caaacatcgc cctcacagct cctaaagctt
      781 cttgagcctg gggctgtggg ccatcaaagt taagtctgac ctagtcttca ttggaaattg
      841 gttcctaacc aggaattaag atggcaaccc ttgtgacccg taaagatatc cccccgtggg
      901 tgaaagttcc tgaagacctg aaagatccag aagtattcca agtccacacg ctggtgctaa
      961 aatctctgtt tggcccacag ggatctcgaa tgcctcacat cgagcaggtg agccgagcca
     1021 tgtttgaact gaagattctg gaatcttccg gacttacgga ggtcttaatt tatggctctt
     1081 gcaaccacaa gcttcgggct aaatggatgc ttcagtccat ggctgagagg taccgcctgc
     1141 gccaggaaag aggaatgctc aagctggagg aagccatgaa gaccctggaa ctgggccagt
     1201 gtttggagtg aagccagttt ccagtcagaa tgactcccac ctgcacacac acagattgag
     1261 ccgtggctgg tgtttggttc tggcgtggtt tttaactacg ttatatcctt tatagtctaa
     1321 cgagatattc ctggatcccc gctgtgactt ctgatgagaa tatctctttt tccaaggctg
     1381 ttattttaac gaataaaatt taaatgatta aaacgcgtgc cattaaaata tggaaagagc
     1441 cat
//
