LOCUS       NM_001134850            3242 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus diphthamide biosynthesis 3 (Dph3), mRNA.
ACCESSION   NM_001134850 XM_001057483 XM_001057532 XM_001058283 XM_001058351
VERSION     NM_001134850.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Sjolinder M, Uhlmann J and Ponstingl H.
  TITLE     Characterisation of an evolutionary conserved protein interacting
            with the putative guanine nucleotide exchange factor DelGEF and
            modulating secretion
  JOURNAL   Exp Cell Res 294 (1), 68-76 (2004)
   PUBMED   14980502
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000273.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001134850.2.
            
            On or before Sep 11, 2008 this sequence version replaced
            XM_001058351.1, XM_001057532.1, XM_001058283.1, XM_001057483.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB324978.1, BQ210768.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-200               JACYVU010000273.1  7293512-7293711     c
            201-275             JACYVU010000273.1  7293030-7293104     c
            276-3242            JACYVU010000273.1  7288295-7291261     c
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..3242
                     /gene="Dph3"
                     /note="diphthamide biosynthesis 3"
                     /db_xref="GeneID:680594"
                     /db_xref="RGD:1590566"
     exon            1..200
                     /gene="Dph3"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..341
                     /gene="Dph3"
                     /note="DPH3, KTI11 homolog; zinc finger, CSL domain
                     containing 2; DPH3 homolog"
                     /codon_start=1
                     /product="diphthamide biosynthesis protein 3"
                     /protein_id="NP_001128322.1"
                     /db_xref="GeneID:680594"
                     /db_xref="RGD:1590566"
                     /translation="MAVFHDEVEIEDFQYDEDTETYFYPCPCGDNFSITKEDLENGED
                     VATCPSCSLIIKVIYDKDQFMCGETVPAPSTNKGLVKC"
     exon            201..275
                     /gene="Dph3"
                     /inference="alignment:Splign:2.1.0"
     exon            276..3242
                     /gene="Dph3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagtgact gttcctgctc cagggagggc cgcccgggcc taccctgcct gggcgcagct
       61 aggcaaactg atgcggtccg gaccgggtga ccatggcggt gtttcatgac gaggtggaga
      121 tcgaggactt tcaatatgac gaggacacag agacgtattt ctacccctgc ccctgtgggg
      181 ataacttctc catcaccaag gaagatttgg aaaatggaga agatgtggca acgtgtccta
      241 gctgctcact cattataaaa gtgatttatg acaaagatca gttcatgtgt ggagaaacag
      301 tcccagctcc ttcaaccaac aaagggttag ttaagtgctg aggacgctct cagaacccac
      361 atccagaaca gcgggggctg agcccaggtg gctggatccg gtgcagagtt accaacctcc
      421 tcagtgggca actatcctgt ggatggcctc atgggtgtga tctacatcag ccactgacct
      481 cggcgtgaag aagtgagcct gtgacacatc agccctggat tccatgctta cctgactggc
      541 aggattcctc tctgtccatc tgaatttaag gaagagccct gtgaactgat ggtttttcct
      601 tcaattggtt gcatcatttg aatatctgaa aattcatttt ctgaaaataa catcatccgc
      661 tcagtcctga gagtgttctt ttatttttta agatttatga ttttattctt aattgtgtgt
      721 atatgtacat ttgtgtgtgg gtatgtgcat gtgagaatca tgtgagaatc gttgcccaag
      781 atggccagag gcactggatc tcctggagca ggagtcacag gcagttggga gccacctgac
      841 atgggtggtg ggacccaaac tttggttccc tgacagcact acacactcca acctctgacc
      901 cctctctcca gcccatggtg ggttcagatg aggcagcctg cctttccagt gctgcacttc
      961 cagttcctcc cacacccagt cagcctgggc tcgccgtgat cgcattgtcc tgtgctcggt
     1021 cacttctgtt acttttcatg cacagagtac agtcctgctg ttagactgtg aggccacggt
     1081 ttccccgtag cttccagtta gtgcagaagg aaggaccgtc tgaagtgaaa tggtaaaaga
     1141 aatgctgcct aacgccctgt gcatccttat gtcaggacaa atgtaaagga aacagccgac
     1201 ggagggtacc cctggcggca gcgagaggcg caaggcctgc taactcggca agtggaagta
     1261 cgtgaatagt tgccagtggg aacaagtctt tctgtatcac ggccttgatt tcttgaaatg
     1321 cctgatggga tccatctcag acgggcgagg ctgatcttca tacgcagtag ttgtaacgta
     1381 gcacagctct gtgtcggcgt taggcctaag gagtgcagac tacaacaggg tgagctctaa
     1441 cagacacgcc cgtgatgcac acctaggaac actgcacata acagaaccca agtcaacacg
     1501 tacccctgct gcgattcttc ccctgaagaa agagacgtat gtcagatggc tattagtctt
     1561 tctccactgc agtctgagag catcaagaag ttagattcac ccattcagaa atttaaaaag
     1621 ttcccttgta aacacagctt tgctgtgaat gcataaagtt ttgaaaatcc attgcttatc
     1681 cagcagattg tttggggtat ggctcctgca actaaaaaaa gccagaaggg actggagaga
     1741 tggctggtag gctaagatct cttgctgttc ttctagaaga cccgtgttca attcttagca
     1801 cccacatagc agctcacaac tccgcctgac tccagttcct ggggctctga ctccttcttc
     1861 taacctctaa ataccaggca tgcacatagt tcagagacat acatgcagac aaaagaccca
     1921 tacaactaaa gaaaaatgta cttaaaaaga aagaaatggg ggctggggat ttagctcagt
     1981 ggtagagcgc ttacctagga agcgcaaggc cctgggttcg gtccccagct ccgaaaaaaa
     2041 gaaccaaaaa aaaaaaaaaa gaaatggcca ataaatgcat tgtatccact cattggaggt
     2101 ttaaattaaa atgtgtaacc aggtttttta accatagaga agtgtgtggt tctaggcaac
     2161 cattaggctg agactaagtt aaaagttgtc tgaagtgtgt tgtccagtac attctttggg
     2221 ggaggtggga aggtgttgaa cccaaggcct ggctcacgct gggcaaatgc tccagtgcag
     2281 ggctgcatct ccggcggaca gttctcatag gaaatctcac tgctgtttgg tgtctcccaa
     2341 attaccgtac aaaacagccg ctactcaaac aggcggagca aggtggttct ggtgagaagg
     2401 agctacatgg agacacagat tgtctgtgct cctcagatcg atggttttgg agagtccact
     2461 aacagtcgtc gtcgtcctcc tcttcctcct cctcctcctc ctcctcttcc ttctcctcct
     2521 cctcctcctt ctcctccttc ttgctgctac tgttgcattc cacagcagat gtcttgttgc
     2581 aggtgttctg tgaacacaaa ggagcaggag tccaagttca aacacctcag gagacaaagc
     2641 atggacagac tggtggtgag tgcctggtgg ggtggatgtg attttgtctt aaagcaaccg
     2701 agcaacttta tagaagcacc agctattagc cccgtattaa acagaaaaac ccaaggtctt
     2761 tcagatgtga ctggagtccc agacgcttcc agaacacctt tgagaaccag taagagtatc
     2821 tgctctgctt gtgagctctg tcgtctttga cagggcctgt ggatggataa ctcatctgta
     2881 cagcaaagtg atggacgggg tcaggtgatc tctcagctgt cagttctcat tttagatgtg
     2941 gttccttgtc agaacacaaa actatcatga gtagaagctt catttttctt tcacaacaac
     3001 acacttcaga gtgaagtttc tagtcagttc ttcaaagggt tctttcctct catgctcatg
     3061 cttttctttc ctgaggtgct tgaacttggg actctgctcc cttttgatca cagaagacct
     3121 acatcattgt gttcacatat gtgtctgaag gcacagccaa tgatttttgt agtactgtaa
     3181 tgaatcaatt cattagaatg acttgcatcg ccaagctaat aaaatgagac catgcaaatt
     3241 ca
//
