LOCUS       NM_001399742            3250 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus deoxynucleotidyltransferase, terminal,
            interacting protein 2 (Dnttip2), mRNA.
ACCESSION   NM_001399742 XM_003749386
VERSION     NM_001399742.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 13, 2022 this sequence version replaced XM_003749386.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.3642.1,
                                           SRR26643297.9401.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                JAXUCZ010000002.1  213058975-213059048
            75-1705             JAXUCZ010000002.1  213059903-213061533
            1706-1844           JAXUCZ010000002.1  213064018-213064156
            1845-1940           JAXUCZ010000002.1  213065580-213065675
            1941-2105           JAXUCZ010000002.1  213067246-213067410
            2106-2215           JAXUCZ010000002.1  213069226-213069335
            2216-3250           JAXUCZ010000002.1  213069986-213071020
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q42"
     gene            1..3250
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /note="deoxynucleotidyltransferase, terminal, interacting
                     protein 2"
                     /db_xref="GeneID:100910753"
                     /db_xref="RGD:6497192"
     exon            1..74
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..2309
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /note="deoxynucleotidyltransferase terminal-interacting
                     protein 2-like"
                     /codon_start=1
                     /product="deoxynucleotidyltransferase terminal-interacting
                     protein 2"
                     /protein_id="NP_001386671.1"
                     /db_xref="GeneID:100910753"
                     /db_xref="RGD:6497192"
                     /translation="MVVTRSGSRIQESSQRKRSVPRRIGTHPESKKESGSKGSTAGSQ
                     SAEEQNSALSGSRNSRTAGPAEITVLISDGEASETESHASGVSSVLEVQEPIIRVTRK
                     RQVVIVPTPKSSVRKRQKVIPQLPQHESGDEGAVSEAESHVSGVSMVVPSTERRTRNK
                     AKSQRDSSQESYSETISDAEWSCSGISSLESAPRRTGRNVQKKLEFQAEKKDTEITPG
                     NKKPIVGPSVDSEDSEAKQPSQLSSARLQSQINMPTISDSETYNNDFDDSIHRNSGEK
                     LTTQNQNLHIQEEKQADVVSLTEVIKNCKNLDEEDPKVIEEKVVNEEDSQLSLSKAQD
                     SSPQQSVSLKHSSIPRKATSQASSPEQEAVMKSLEHKFAVVKIERCNKERGGNVEKSD
                     LAQFSDCGNSNDEPASVGVSEDKSSQRDVALECDAMPCKSELSMSRHTDSPILLFLSS
                     DESQQSDSSENERDTLCPVENSGQKEASAEDLEDPACGSALFVIDRTPGLSADKNFYL
                     EDKTPSEAAIEEEKEEEDEEGEEENSEDSSDGDEKKDESSDEEDFLSSTKSKLLKLTS
                     SSIDPGLNIKELGGLYINFNADKLQPHKKTLSQIKEKKKNELLQKAVITPDFEKNYCV
                     PPYSESKHQLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLKALKMRASMDPKRFYK
                     KNDRDGFPKYFQVGTIVDNPADFYHSRIPKKQRKKTIVEELLADSEFRRFNRRKYSEI
                     MAEKAANAEGKKFRKKKKFRN"
     exon            75..1705
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     exon            1706..1844
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     exon            1845..1940
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     exon            1941..2105
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     exon            2106..2215
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
     exon            2216..3250
                     /gene="Dnttip2"
                     /gene_synonym="RGD1309084"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggggaata cggagtcgca aacatggtgg tcactaggtc tgggtccagg atccaagaaa
       61 gttcccaacg gaagaggtct gttcctcgga gaattggaac acatccagaa agcaaaaaag
      121 aatcgggatc gaaaggcagc actgctggat cgcagtctgc tgaggagcag aactcagccc
      181 tctctggcag caggaacagc agaaccgcag gcccagcgga gatcactgta ctgatttctg
      241 atggagaggc ctctgaaacg gagtctcatg cttctggggt ttcttctgtg ttagaggtcc
      301 aagagcccat tataagagta actaggaaac gtcaggttgt aattgtgccc accccgaagt
      361 ccagtgttag gaaaaggcag aaagtaatcc ctcaactccc tcaacatgaa tctggggatg
      421 aaggagctgt ttctgaagca gagtctcatg tttcaggggt ttctatggtt gtaccttcca
      481 cagaaagaag aaccagaaat aaggctaaat ctcaaagaga ttcaagccaa gaatcatatt
      541 cggaaactat atctgatgct gagtggtcct gctcaggcat ttcatcattg gagagtgcac
      601 cgaggagaac aggcaggaat gtgcagaaga aattagagtt ccaagctgag aaaaaagata
      661 ctgagattac accaggaaat aaaaagccaa tcgtgggtcc gtctgtggat tcagaggact
      721 cagaagctaa acagccctct cagttgtcat cggcaagact gcagtctcag ataaatatgc
      781 cgactatttc tgatagtgaa acgtataata atgactttga cgattccatt cacagaaatt
      841 caggggaaaa actgacaacc caaaaccaaa atttgcatat ccaagaggaa aaacaagccg
      901 atgttgtatc tcttacagaa gtcataaaga attgtaagaa tctggatgag gaggacccca
      961 aagtaataga ggaaaaagta gttaatgagg aagattccca gctgagtctt tccaaagctc
     1021 aagactccag ccctcagcag tcagtgtctc tgaagcattc aagcatccca cgtaaagcca
     1081 catcccaggc ttcaagtcca gagcaggagg ctgtaatgaa atcactagag cacaagtttg
     1141 cagttgtgaa aatagaaaga tgtaataaag agagaggggg caacgtagaa aagagtgact
     1201 tggcacagtt cagtgattgt ggtaatagca atgatgagcc tgcaagtgta ggtgtcagtg
     1261 aggacaagag cagccaaagg gatgtcgctc ttgaatgtga tgccatgcca tgcaagtctg
     1321 aactcagcat gtctcggcat acagatagtc ctattctatt atttcttagc agtgatgaaa
     1381 gccaacagtc tgacagcagt gagaatgaaa gggacacttt gtgtcctgtt gaaaacagtg
     1441 gccaaaagga ggcatcagct gaggacttgg aagatcctgc ctgtggtagt gcactgtttg
     1501 taatcgacag aactcctgga ttgagtgctg ataaaaactt ttacctggaa gataagactc
     1561 caagtgaggc tgctattgag gaagaaaagg aagaagaaga tgaggaggga gaggaggaaa
     1621 atagtgaaga ctcatcagac ggtgatgaga agaaggatga atctagtgat gaggaagact
     1681 tcctcagtag caccaagtct aagcttttga aattgacaag tagcagcata gaccctggac
     1741 taaacatcaa ggagttgggt ggcttgtata ttaattttaa tgcagacaag ctgcagcccc
     1801 acaagaaaac actaagccag atcaaagaga aaaagaaaaa cgagcttctg cagaaagctg
     1861 tcatcacacc tgattttgaa aaaaactatt gtgtcccacc atatagtgag tcaaagcatc
     1921 agcttcagaa acagcgcagg aaagagagac aaaaaacagc tggtaatggt tggtttggca
     1981 tgaaagctcc ggaactgaca gacgaactga aaaatgacct caaagcctta aagatgagag
     2041 caagcatgga cccaaagagg ttttataaga aaaatgacag agatggcttc cctaagtact
     2101 tccaggttgg aaccattgtt gataatccag ccgacttcta ccattcacgg attcccaaga
     2161 aacagaggaa aaagaccatt gtggaagaac tgctggctga ttcagagttc aggagattta
     2221 atcgaaggaa gtattcggaa atcatggctg aaaaagcagc aaatgcagaa ggaaagaagt
     2281 tccgaaaaaa gaagaaattt cgcaattaaa atttacatag cataccataa tattttatag
     2341 gtcttgattt gctgaagatt atcatataat ttatataata tgtgtaaata gtgatttcta
     2401 tttggaaata aaaattactg acagaatcaa ttatgtgacc cttggaataa aagtaggtgt
     2461 atgtttcaga tgatatgtct ggttttagac tgttaaaagg aaaatgaata tcagctattt
     2521 taatgtttgt ccaattaaaa caaaatcagt tctgtttaag gaacttttga gggctgctga
     2581 gatggctctg cagttaacac tgctcttcca gaactcctca gttcagttcc ctgcaaccac
     2641 agtgtggctc atgaccattt gtagaggtat caggccactc tggcctgtct atacatgcag
     2701 acagagcact cctacattca aataccaagt gcagaaagaa cgtttgaagt aactcagtta
     2761 taaaagtgcc aggatgcaga cacggctcat acacacatac atgcctggtt cttcccgtgt
     2821 acaagctacg ctgtgtgagt aaaagtattc ctgaagcaga aacaaagaac tatgtgaaca
     2881 tcaaacaagc ctgaagcaac tgaggcctcc taggaaaacc gggtaaagat gcgagaggag
     2941 agtttttctt agcaactgga atgggatgaa tgattaattt tgttctaaac aaaacaggat
     3001 taaacaggat tttcactggc tagtaggtca aatgactcag tttaccaggg cttaggtagg
     3061 ccctggacct gacctgcttt ttggtaccca aggagtgctg tcgagaccta ttggtgcttc
     3121 ttggctgtag ctcttttgtg ttatttatat ttcagtaact attaagtcaa cattttactt
     3181 tcactgttta gagtcataag caacctagca tctatgcttc ctttattaaa acagaagtat
     3241 ttgagtaata
//
