LOCUS       NM_134400               1272 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus deoxynucleotidyltransferase, terminal,
            interacting protein 1 (Dnttip1), mRNA.
ACCESSION   NM_134400 XM_215927
VERSION     NM_134400.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Itoh,T., Fairall,L., Muskett,F.W., Milano,C.P., Watson,P.J.,
            Arnaudo,N., Saleh,A., Millard,C.J., El-Mezgueldi,M., Martino,F. and
            Schwabe,J.W.
  TITLE     Structural and functional characterization of a cell cycle
            associated HDAC1/2 complex reveals the structural basis for complex
            assembly and nucleosome targeting
  JOURNAL   Nucleic Acids Res 43 (4), 2033-2044 (2015)
   PUBMED   25653165
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Fujisaki,S., Sato,A., Toyomoto,T., Hayano,T., Sugai,M., Kubota,T.
            and Koiwai,O.
  TITLE     Direct binding of TReP-132 with TdT results in reduction of TdT
            activity
  JOURNAL   Genes Cells 11 (1), 47-57 (2006)
   PUBMED   16371131
REFERENCE   3  (bases 1 to 1272)
  AUTHORS   Yamashita,N., Shimazaki,N., Ibe,S., Kaneko,R., Tanabe,A.,
            Toyomoto,T., Fujita,K., Hasegawa,T., Toji,S., Tamai,K., Yamamoto,H.
            and Koiwai,O.
  TITLE     Terminal deoxynucleotidyltransferase directly interacts with a
            novel nuclear protein that is homologous to p65
  JOURNAL   Genes Cells 6 (7), 641-652 (2001)
   PUBMED   11473582
REFERENCE   4  (bases 1 to 1272)
  AUTHORS   Hanausek,M., Szemraj,J., Adams,A.K. and Walaszek,Z.
  TITLE     The oncofetal protein p65: a new member of the steroid/thyroid
            receptor superfamily
  JOURNAL   Cancer Detect Prev 20 (2), 94-102 (1996)
   PUBMED   8706045
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC100640.1.
            
            On Jun 14, 2007 this sequence version replaced NM_134400.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100640.1, AF348701.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1272              BC100640.1         1-1272
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..1272
                     /gene="Dnttip1"
                     /note="deoxynucleotidyltransferase, terminal, interacting
                     protein 1"
                     /db_xref="GeneID:171437"
                     /db_xref="RGD:621627"
     exon            1..158
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             54..1040
                     /gene="Dnttip1"
                     /note="tdIF1; tdT-interacting factor 1; terminal
                     deoxynucleotidyltransferase-interacting factor 1"
                     /codon_start=1
                     /product="deoxynucleotidyltransferase terminal-interacting
                     protein 1"
                     /protein_id="NP_599227.2"
                     /db_xref="GeneID:171437"
                     /db_xref="RGD:621627"
                     /translation="MGATGDTEQPRGPGGAERGGLELGDAGAAGQPVLTNPWNIMIKH
                     RQVQRRGRRSQMTTSFTDPAISMDLLRAVLQPSINEEIQSVFNKYMKFFQKAALNVRD
                     NVGEEVDAEQLIQEACRSCLEQAKLLFSDGEKVIPRLAHELPGIKRGRQAEEESHRGS
                     PIPKKRKGRPPGHVLSNDRAAAGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGSRA
                     NKALGMGGTRGRIYIKHPHLFKYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDL
                     AASDDYRGCLDLKLEELKSFVLPSWMVEKMRKYMETLRTENEHRAAEATPQT"
     exon            159..229
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            230..326
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            327..425
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            426..494
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            495..548
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            549..607
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            608..653
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            654..712
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            713..773
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            774..845
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            846..901
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1272
                     /gene="Dnttip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccgctttc cggtgactga gtcgagctga ggttgttgtg ggccgggggc gccatggggg
       61 cgactggcga caccgagcag ccgcggggcc ccggcggggc ggagcgaggc ggcctggagc
      121 tgggcgacgc gggcgcggcg ggccagccgg ttctcacgaa cccttggaac ataatgatca
      181 aacaccggca ggtgcagcga agaggccgcc gatctcagat gaccacaagt ttcacagatc
      241 cagccatctc tatggatctc ctccgtgctg tcctgcagcc tagcatcaat gaggagatcc
      301 agagtgtctt caacaagtac atgaagttct tccagaaggc agcgctgaat gtgcgagaca
      361 acgttggtga agaggtggat gcagaacagt tgattcagga ggcctgccgc agctgcctgg
      421 agcaggcaaa gctactcttt tcagatggag aaaaagtgat acccagattg gcccatgaac
      481 ttccagggat caagcgtggc cggcaggcag aagaggagtc ccaccgagga agccccattc
      541 ccaaaaagag gaaaggtcgg cctcctggac atgtcctgtc aaatgaccgc gcagctgctg
      601 gcatggtatg gaaaccaaaa tcctgtgaac caattcgccg agaaggcccc aagtgggacc
      661 cagctcggct gaatgaatct accacctttg ttttggggtc tcgagccaac aaggccttag
      721 ggatgggagg caccagaggg aggatttaca tcaagcaccc acacctcttt aagtatgcag
      781 cagatcctca ggacaagcac tggctggctg agcagcatca tatgcgggca acaggaggaa
      841 agatggcgta ccttctcatt gaggaagaca tccgagactt ggctgccagc gatgactaca
      901 gaggatgctt ggacctgaag ttggaggagc tgaagtcctt tgttctgcca tcctggatgg
      961 ttgagaagat gcggaaatac atggagacac tacggacaga aaatgagcat cgtgctgctg
     1021 aagcaactcc ccagacctga gccgagtgtc ctggctacta cacttggcag tctgcctccc
     1081 agaccctctt tcccggcccg gctgaggcca tcatggggat gcggtctagt tggctcttag
     1141 cagcatcaag ctgtacatga gctagtttgt agtgactcac tgcagagccc cccagactgg
     1201 cttgtggttc tgtttctaaa gttattggaa taagaagcaa ttaaacaagt ttgtaataaa
     1261 cacaggtggt ga
//
