LOCUS       XM_039087892            5040 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dynamin 1-like (Dnm1l), transcript
            variant X5, mRNA.
ACCESSION   XM_039087892
VERSION     XM_039087892.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087892.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5040
                     /gene="Dnm1l"
                     /gene_synonym="DLP1; Dnml1; Drp1"
                     /note="dynamin 1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 69 ESTs, 10 long
                     SRA reads, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 126
                     samples with support for all annotated introns"
                     /db_xref="GeneID:114114"
                     /db_xref="RGD:620416"
     CDS             159..2393
                     /gene="Dnm1l"
                     /gene_synonym="DLP1; Dnml1; Drp1"
                     /codon_start=1
                     /product="dynamin-1-like protein isoform X5"
                     /protein_id="XP_038943820.1"
                     /db_xref="GeneID:114114"
                     /db_xref="RGD:620416"
                     /translation="MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLES
                     LVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEE
                     WGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDL
                     PGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDP
                     DGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIR
                     DEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNS
                     YGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLE
                     SVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHE
                     EMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN
                     TKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASA
                     EADGKVASAGGGIGDGGRIGDGGQEPTTGNWRGMLKTSKAEELLAEEKSKPIPIMPAS
                     PQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFL
                     VNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRE
                     THLW"
ORIGIN      
        1 cgtggcctgc cgggagcggg ctgggaggtg gcggcctagc ccaatgggtg cgtgctcccg
       61 aggagagggc ggaggagaaa aggaagcaag cgggctgcgg gctgcgtccc cattcattgc
      121 agtggtctgc tgggttgggg tccagtgttt ccggagtcat ggaggcgctg atcccggtca
      181 tcaataagct gcaagacgtc ttcaacaccg tgggcgccga catcatccag ctgcctcaga
      241 ttgtcgtagt gggaactcag agcagtggaa agagctcagt gctggaaagc ctagtgggga
      301 gggaccttct tcccagaggg actggtgtgg tcacccggag acctcttatt ctgcagctgg
      361 tccacgtttc accagaagat aaaagaaaaa caacaggaga agaaaatgac cctgctacat
      421 ggaaaaactc aagacacctt tctaaaggag ttgaagcaga agaatggggt aaatttcttc
      481 acaccaaaaa caagctttac acagattttg atgaaattcg acaagaaatt gaaaatgaaa
      541 ctgaaagaat ttcaggaaat aataagggag taagccctga gccaatccat ctcaaggttt
      601 tctcgcccaa cgttgtcaac ctgacgcttg tggatttacc aggaatgacc aaagtacctg
      661 taggtgatca gcccaaggat attgagcttc aaatcagaga acttattctt cggttcatca
      721 gtaatcccaa ttccattatc cttgctgtca ctgctgcaaa tacagatatg gcaacgtcag
      781 aggcacttaa gatttccaga gaggtagatc cagatgggcg cagaactcta gctgtaatca
      841 ccaagcttga tctcatggat gcgggtactg atgccatgga tgtattgatg ggaagggtta
      901 ttccagtcaa gcttggaata attggagtag ttaacaggag ccaactggac attaacaata
      961 agaagagtgt aactgattca atccgtgatg agtatgcttt tcttcaaaag aagtacccat
     1021 ctctggccaa cagaaatgga acaaagtatc ttgctaggac tctgaatagg ttacttatgc
     1081 atcatatcag agactgttta ccagagctga aaacaagaat aaatgtctta gctgctcagt
     1141 atcagtctct tctaaatagc tatggtgagc ccgtggatga taaaagtgct actttactcc
     1201 agctcattac caagtttgcc acagagtatt gtaacactat tgaaggaacg gcaaagtaca
     1261 ttgaaacttc tgagctatgt ggtggtgcta ggatttgtta tattttccat gagacttttg
     1321 ggcgaacctt agaatctgtt gatccactag gtggccttaa cactattgac atcttgaccg
     1381 ccattagaaa tgctactggc ccccgtccag ctttatttgt gcctgaagtt tcatttgagt
     1441 tactggtcaa acgtcagatt aagcgtctag aggagcccag cctccgctgt gtggagctgg
     1501 tccacgagga aatgcagagg atcattcagc actgtagcaa ctacagcaca caggaactgt
     1561 tacggttccc taaactccat gatgccatag ttgaagtagt gacttgtctt cttcgtaaaa
     1621 ggttgcccgt gacaaatgaa atggtacata acttagtggc aattgagcta gcatatatca
     1681 acacaaaaca ccccgacttt gctgatgcct gtgggctaat gaacaataac atagaggaac
     1741 aaagaagaaa cagactagca agagaactac cttccgctgt atcgcgagac aagtcttcta
     1801 aagttccaag tgctttggca cctgcctccc aggagccctc ccctgccgct tctgccgagg
     1861 ctgatggcaa ggttgcatct gcaggtggtg gaattggaga tggtggtcga attggagatg
     1921 gtggtcagga accgacaaca ggcaactgga gaggaatgct gaaaacttca aaagctgaag
     1981 aattacttgc tgaagaaaaa tcaaaaccaa ttccaattat gccagcaagt ccacaaaaag
     2041 gccatgctgt caatttgcta gatgtgccag ttccagttgc acgaaaactg tctgcccgag
     2101 aacagcgaga ttgtgaggtt attgaaagac tcatcaaatc atattttcta attgtcagaa
     2161 agaatattca agacagcgtc ccaaaggcag taatgcattt tttggttaat catgtgaaag
     2221 atactcttca gagtgaatta gtagggcagc tgtataagtc atccttatta gatgaccttc
     2281 tgactgaatc cgaggacatg gcacagcgaa gaaaagaagc ggctgacatg ctgaaggcat
     2341 tacaaggagc cagtcaaatt attgctgaaa tccgagagac tcatctttgg tgaacagaac
     2401 tgtttggtct tctacacttt gctgacttga acctactagc tactgcctac ctgagtagaa
     2461 atttatttat ggacttttgt gtatcgcagt gtatgaattt gcttgtgtga agactggcta
     2521 taagctgaaa agtatattat tcattacaag acaaatcaca tgtttaattc acatttttca
     2581 agtttcctat gatgtatatc aagtctgtcc gtttcagtca aacttacaag aacaattgat
     2641 gttctagttg tacaaagcag tttgcctgtg catatgatga cctgcgtaac ctttttttag
     2701 tcttaaagct gcagccgtag tcctcaaaga ggaagctcca ggacatttca tgactataat
     2761 gcatgcacta tttatataga ctgacctggc ttcaaaaggt ggagcctggc gagttcctca
     2821 cataatcaat gtatccacct atccttcatt tttatagtct taaaaaacaa acaaaattct
     2881 gaaacttctg cagttttagg aaaaatataa gatctgaaag actcataaag atgtaggaac
     2941 agactgtgta attaatggct cctgagtcta tactgcccta atgttagaaa gtaaaatatg
     3001 ctttgattca aaataagcct gaaaatataa attgacttcc tgcattaaaa ataactatta
     3061 ggaactttct tagtaacaat aactggtcct gttagtttct aaatgactca gtgacaacct
     3121 aaatttccct aatttacaag tacatcgatt gcagtccaga tgcaccttag ggtggggcgc
     3181 tgactctggg ctccgagact cagttatgtg agacctaaaa gtctactctg tatccactgg
     3241 taatgctact ttatagttcc acaccaacag aatacatttg tcaaagaaaa atacctggac
     3301 atacacatac acctaaaagc ttatggacta ctaaactgta ttcaggggtt gaggatttac
     3361 aacctatttt gtgaaaactg cctgtgcaat tcaatttctg acctagctgg gcagtggtgg
     3421 tgcacacctt taatcccagc ttttgggagg cagaggcagg tggatctctg agttcaaggc
     3481 cagcctggtc tacagagttg agttccaaga caaccagaac tacacagaga aaccctgtct
     3541 tgaacccccc tccccccaaa aaattgaaac ctaaatagaa atctttgatg tatctagttt
     3601 tctctgacca aatgatacat ttgtgttata aatactaaaa ttcttttcag gtcaggcatc
     3661 ttatgaaata ctattagcaa ggaaaacaag aacatgttat ctttagttta gatgcccatt
     3721 gaaccatctc aaaaacaaag gcagtctgat aacagtacca gcttgacagt gagtatacac
     3781 tgcctaaatg tgttagcata cttaagaaaa atatcctgtt atctaactat taggtatcca
     3841 tggtttattt tttaagagag atgaccacca ctgtagcctt ttgaatttgt aaagagaaag
     3901 aatgcacctt tatccaacat ttcaaataga ttttaaaagg aagatgttag ctttaaaaac
     3961 gtgctatgat aatgtacttg ttagcactac acactttgta caaagaaaaa caagcaagaa
     4021 aggtagggaa atgaaagctt cctttgtgta cttttacact aagctgtgtt ctgaaacatg
     4081 gagataattt ataagaccac tgtatgttct atgtaaataa aaatgctggt gtgaaatggc
     4141 attacggttt gccagtaagt gaattcttcc tgacttgccg taagagagag gtttaaatag
     4201 gtgcatcttt gaaatatctg aatctacttc ataatggaac gatttaaatt gtactgcacc
     4261 aaaagtttta tgccattttt ttaattagat aatcaccacc aaggccttgt tacatctttg
     4321 tgtctacaga tgaagacaga aacttcttcc aagtaatcca aggatgaatg ctgagaacat
     4381 gaactttgct gcaagacgtc tagaagctga tccacagttt atgtttcacc cctatgtaca
     4441 ttggggtggt gctatcttga tttttacaga aactgttttt gagaattagc ttgccttgtg
     4501 tatacaaacc tgaactagtt tgacttcaaa acttcctgta tcttttctgt tcttactgac
     4561 tgcatacttg atgagatact ttttgtttct ttggtttctt aaaatatctg ctataggaac
     4621 ccactggcaa aaataggcag ttatcagtaa attattgaaa cacagaacaa ggaagtggaa
     4681 aactgaacta taaatgaagt ctggtactga ttgatgtttt gttttaagaa aaaactattt
     4741 tgtactacag tttctattgg gaaccactgc catatctaac tcctttttaa gaattctgtt
     4801 tgcttggcag catcaatcag aagtttaact ttgtaacaga tttctcacat ctaaacagac
     4861 attagaagct tggccagttt gtacagctat gtaacacaac tgcaatcagg tgcttacctt
     4921 acctcctgtg ttaactttat acagtcattt ccactgcacc acttcttcag accaaggagc
     4981 aagaaagatc attcttgcat aaagaaatga actataatta aatatcactt tattttgaaa
//
