LOCUS       XM_039087891            5053 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dynamin 1-like (Dnm1l), transcript
            variant X4, mRNA.
ACCESSION   XM_039087891
VERSION     XM_039087891.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087891.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5053
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5053
                     /gene="Dnm1l"
                     /gene_synonym="DLP1; Dnml1; Drp1"
                     /note="dynamin 1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 62 ESTs, 8 long
                     SRA reads, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 118
                     samples with support for all annotated introns"
                     /db_xref="GeneID:114114"
                     /db_xref="RGD:620416"
     CDS             160..2406
                     /gene="Dnm1l"
                     /gene_synonym="DLP1; Dnml1; Drp1"
                     /codon_start=1
                     /product="dynamin-1-like protein isoform X4"
                     /protein_id="XP_038943819.1"
                     /db_xref="GeneID:114114"
                     /db_xref="RGD:620416"
                     /translation="MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLES
                     LVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENGKFQSWRVEAEEWGKFLHT
                     KNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVP
                     VGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLA
                     VITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQ
                     KKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDD
                     KSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGG
                     LNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQ
                     HCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFA
                     DACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKLI
                     QDNRRETKNVASAGGGIGDGGRIGDGGQEPTTGNWRGMLKTSKAEELLAEEKSKPIPI
                     MPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAV
                     MHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIA
                     EIRETHLW"
ORIGIN      
        1 gcgtggcctg ccgggagcgg gctgggaggt ggcggcctag cccaatgggt gcgtgctccc
       61 gaggagaggg cggaggagaa aaggaagcaa gcgggctgcg ggctgcgtcc ccattcattg
      121 cagtggtctg ctgggttggg gtccagtgtt tccggagtca tggaggcgct gatcccggtc
      181 atcaataagc tgcaagacgt cttcaacacc gtgggcgccg acatcatcca gctgcctcag
      241 attgtcgtag tgggaactca gagcagtgga aagagctcag tgctggaaag cctagtgggg
      301 agggaccttc ttcccagagg gactggtgtg gtcacccgga gacctcttat tctgcagctg
      361 gtccacgttt caccagaaga taaaagaaaa acaacaggag aagaaaatgg taaatttcag
      421 agctggagag ttgaagcaga agaatggggt aaatttcttc acaccaaaaa caagctttac
      481 acagattttg atgaaattcg acaagaaatt gaaaatgaaa ctgaaagaat ttcaggaaat
      541 aataagggag taagccctga gccaatccat ctcaaggttt tctcgcccaa cgttgtcaac
      601 ctgacgcttg tggatttacc aggaatgacc aaagtacctg taggtgatca gcccaaggat
      661 attgagcttc aaatcagaga acttattctt cggttcatca gtaatcccaa ttccattatc
      721 cttgctgtca ctgctgcaaa tacagatatg gcaacgtcag aggcacttaa gatttccaga
      781 gaggtagatc cagatgggcg cagaactcta gctgtaatca ccaagcttga tctcatggat
      841 gcgggtactg atgccatgga tgtattgatg ggaagggtta ttccagtcaa gcttggaata
      901 attggagtag ttaacaggag ccaactggac attaacaata agaagagtgt aactgattca
      961 atccgtgatg agtatgcttt tcttcaaaag aagtacccat ctctggccaa cagaaatgga
     1021 acaaagtatc ttgctaggac tctgaatagg ttacttatgc atcatatcag agactgttta
     1081 ccagagctga aaacaagaat aaatgtctta gctgctcagt atcagtctct tctaaatagc
     1141 tatggtgagc ccgtggatga taaaagtgct actttactcc agctcattac caagtttgcc
     1201 acagagtatt gtaacactat tgaaggaacg gcaaagtaca ttgaaacttc tgagctatgt
     1261 ggtggtgcta ggatttgtta tattttccat gagacttttg ggcgaacctt agaatctgtt
     1321 gatccactag gtggccttaa cactattgac atcttgaccg ccattagaaa tgctactggc
     1381 ccccgtccag ctttatttgt gcctgaagtt tcatttgagt tactggtcaa acgtcagatt
     1441 aagcgtctag aggagcccag cctccgctgt gtggagctgg tccacgagga aatgcagagg
     1501 atcattcagc actgtagcaa ctacagcaca caggaactgt tacggttccc taaactccat
     1561 gatgccatag ttgaagtagt gacttgtctt cttcgtaaaa ggttgcccgt gacaaatgaa
     1621 atggtacata acttagtggc aattgagcta gcatatatca acacaaaaca ccccgacttt
     1681 gctgatgcct gtgggctaat gaacaataac atagaggaac aaagaagaaa cagactagca
     1741 agagaactac cttccgctgt atcgcgagac aagtcttcta aagttccaag tgctttggca
     1801 cctgcctccc aggagccctc ccctgccgct tctgccgagg ctgatggcaa gttaattcag
     1861 gacaacagaa gagaaactaa aaatgttgca tctgcaggtg gtggaattgg agatggtggt
     1921 cgaattggag atggtggtca ggaaccgaca acaggcaact ggagaggaat gctgaaaact
     1981 tcaaaagctg aagaattact tgctgaagaa aaatcaaaac caattccaat tatgccagca
     2041 agtccacaaa aaggccatgc tgtcaatttg ctagatgtgc cagttccagt tgcacgaaaa
     2101 ctgtctgccc gagaacagcg agattgtgag gttattgaaa gactcatcaa atcatatttt
     2161 ctaattgtca gaaagaatat tcaagacagc gtcccaaagg cagtaatgca ttttttggtt
     2221 aatcatgtga aagatactct tcagagtgaa ttagtagggc agctgtataa gtcatcctta
     2281 ttagatgacc ttctgactga atccgaggac atggcacagc gaagaaaaga agcggctgac
     2341 atgctgaagg cattacaagg agccagtcaa attattgctg aaatccgaga gactcatctt
     2401 tggtgaacag aactgtttgg tcttctacac tttgctgact tgaacctact agctactgcc
     2461 tacctgagta gaaatttatt tatggacttt tgtgtatcgc agtgtatgaa tttgcttgtg
     2521 tgaagactgg ctataagctg aaaagtatat tattcattac aagacaaatc acatgtttaa
     2581 ttcacatttt tcaagtttcc tatgatgtat atcaagtctg tccgtttcag tcaaacttac
     2641 aagaacaatt gatgttctag ttgtacaaag cagtttgcct gtgcatatga tgacctgcgt
     2701 aacctttttt tagtcttaaa gctgcagccg tagtcctcaa agaggaagct ccaggacatt
     2761 tcatgactat aatgcatgca ctatttatat agactgacct ggcttcaaaa ggtggagcct
     2821 ggcgagttcc tcacataatc aatgtatcca cctatccttc atttttatag tcttaaaaaa
     2881 caaacaaaat tctgaaactt ctgcagtttt aggaaaaata taagatctga aagactcata
     2941 aagatgtagg aacagactgt gtaattaatg gctcctgagt ctatactgcc ctaatgttag
     3001 aaagtaaaat atgctttgat tcaaaataag cctgaaaata taaattgact tcctgcatta
     3061 aaaataacta ttaggaactt tcttagtaac aataactggt cctgttagtt tctaaatgac
     3121 tcagtgacaa cctaaatttc cctaatttac aagtacatcg attgcagtcc agatgcacct
     3181 tagggtgggg cgctgactct gggctccgag actcagttat gtgagaccta aaagtctact
     3241 ctgtatccac tggtaatgct actttatagt tccacaccaa cagaatacat ttgtcaaaga
     3301 aaaatacctg gacatacaca tacacctaaa agcttatgga ctactaaact gtattcaggg
     3361 gttgaggatt tacaacctat tttgtgaaaa ctgcctgtgc aattcaattt ctgacctagc
     3421 tgggcagtgg tggtgcacac ctttaatccc agcttttggg aggcagaggc aggtggatct
     3481 ctgagttcaa ggccagcctg gtctacagag ttgagttcca agacaaccag aactacacag
     3541 agaaaccctg tcttgaaccc ccctcccccc aaaaaattga aacctaaata gaaatctttg
     3601 atgtatctag ttttctctga ccaaatgata catttgtgtt ataaatacta aaattctttt
     3661 caggtcaggc atcttatgaa atactattag caaggaaaac aagaacatgt tatctttagt
     3721 ttagatgccc attgaaccat ctcaaaaaca aaggcagtct gataacagta ccagcttgac
     3781 agtgagtata cactgcctaa atgtgttagc atacttaaga aaaatatcct gttatctaac
     3841 tattaggtat ccatggttta ttttttaaga gagatgacca ccactgtagc cttttgaatt
     3901 tgtaaagaga aagaatgcac ctttatccaa catttcaaat agattttaaa aggaagatgt
     3961 tagctttaaa aacgtgctat gataatgtac ttgttagcac tacacacttt gtacaaagaa
     4021 aaacaagcaa gaaaggtagg gaaatgaaag cttcctttgt gtacttttac actaagctgt
     4081 gttctgaaac atggagataa tttataagac cactgtatgt tctatgtaaa taaaaatgct
     4141 ggtgtgaaat ggcattacgg tttgccagta agtgaattct tcctgacttg ccgtaagaga
     4201 gaggtttaaa taggtgcatc tttgaaatat ctgaatctac ttcataatgg aacgatttaa
     4261 attgtactgc accaaaagtt ttatgccatt tttttaatta gataatcacc accaaggcct
     4321 tgttacatct ttgtgtctac agatgaagac agaaacttct tccaagtaat ccaaggatga
     4381 atgctgagaa catgaacttt gctgcaagac gtctagaagc tgatccacag tttatgtttc
     4441 acccctatgt acattggggt ggtgctatct tgatttttac agaaactgtt tttgagaatt
     4501 agcttgcctt gtgtatacaa acctgaacta gtttgacttc aaaacttcct gtatcttttc
     4561 tgttcttact gactgcatac ttgatgagat actttttgtt tctttggttt cttaaaatat
     4621 ctgctatagg aacccactgg caaaaatagg cagttatcag taaattattg aaacacagaa
     4681 caaggaagtg gaaaactgaa ctataaatga agtctggtac tgattgatgt tttgttttaa
     4741 gaaaaaacta ttttgtacta cagtttctat tgggaaccac tgccatatct aactcctttt
     4801 taagaattct gtttgcttgg cagcatcaat cagaagttta actttgtaac agatttctca
     4861 catctaaaca gacattagaa gcttggccag tttgtacagc tatgtaacac aactgcaatc
     4921 aggtgcttac cttacctcct gtgttaactt tatacagtca tttccactgc accacttctt
     4981 cagaccaagg agcaagaaag atcattcttg cataaagaaa tgaactataa ttaaatatca
     5041 ctttattttg aaa
//
