LOCUS       XM_039104151            2830 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dynamin 1 (Dnm1), transcript variant
            X11, mRNA.
ACCESSION   XM_039104151
VERSION     XM_039104151.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104151.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2830
                     /gene="Dnm1"
                     /gene_synonym="Dnm"
                     /note="dynamin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 ESTs, 1 long SRA read,
                     8 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 75 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:140694"
                     /db_xref="RGD:71096"
     CDS             151..2706
                     /gene="Dnm1"
                     /gene_synonym="Dnm"
                     /codon_start=1
                     /product="dynamin-1 isoform X10"
                     /protein_id="XP_038960079.1"
                     /db_xref="GeneID:140694"
                     /db_xref="RGD:71096"
                     /translation="MGNRGMEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGK
                     SSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIE
                     AETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML
                     MQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARD
                     VLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPY
                     LQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQ
                     QFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAI
                     KNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKCSEKLQQYP
                     RLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQQRSNQMNK
                     KKTSGNQDEILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLS
                     VDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAG
                     VYPERVGDKEKASETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMP
                     KTIMHLMINNTKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALS
                     IIGDINTTTVSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGP
                     APGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPRITISDP"
ORIGIN      
        1 gcctggagaa gcgctccgct cggatccccg agaggcggag gacccgcggt gcacgcagtc
       61 gggatattcc gctgcagccg cgaagccggg ggccaagagc cggagcagga gcggctgccg
      121 ggatcgcagc ccgccgggcc cgccgcaacc atgggcaacc gcggcatgga agacctcatc
      181 ccgctggtta accggttaca ggacgccttc tctgccatcg gccagaacgc ggacctcgac
      241 ttgccgcaga tcgccgtggt aggcggccag agcgccggca agagctcggt gctggagaat
      301 ttcgtgggca gggacttctt gccccgagga tccggcatcg tcacccggcg tcccctggtc
      361 ctgcagctgg ttaattctac cacagaatat gccgagttcc tgcactgcaa ggggaagaaa
      421 ttcaccgact tcgaggaggt gcgcctggag atcgaggctg agaccgaccg agtcactggc
      481 accaacaagg gcatttcgcc tgtgcccatc aacctgcgtg tctactcacc ccatgtgctc
      541 aacctgactc tagtggacct gccaggaatg accaaggtcc cagttgggga ccaacctcct
      601 gacatcgagt tccagatccg ggacatgctt atgcagtttg tcactaagga gaactgcctt
      661 atcctggctg tgtcccctgc caactcggac ctggccaact ctgatgccct caagatcgcc
      721 aaggaggtgg acccccaggg tcagcgcacc attggggtca tcaccaagtt ggacctgatg
      781 gacgagggca cagatgctcg ggatgtgctg gagaacaagc tgctcccatt gcgcagaggc
      841 tacattggcg tggtgaaccg gagccagaag gacatagatg gcaagaagga tatcacagcc
      901 gccttggctg ccgagcgcaa attcttcctc tcccacccat cctaccgcca cttggctgac
      961 cgcatgggca caccctacct gcagaaggtc ctcaaccagc aactgaccaa ccacatccgg
     1021 gacacgctgc cgggacttcg gaacaaactg cagagccagc tgctgtccat tgagaaggag
     1081 gtggacgagt acaagaactt ccgaccggat gacccagcgc gcaagaccaa ggccctgctg
     1141 cagatggtcc agcagtttgc agtggacttc gagaagcgca ttgagggttc tggagaccag
     1201 atcgacactt atgaactgtc aggtggagcc cgcattaacc ggatcttcca cgaacgcttc
     1261 ccttttgagc tggttaagat ggagtttgat gagaaggaac tgcgaaggga gatcagctac
     1321 gctatcaaga acattcatgg catcaggaca ggcctcttca ctcctgacct cgcttttgaa
     1381 gccacagtga aaaagcaggt gcagaagctc aaagagccca gtatcaagtg tgtggacatg
     1441 gtagtcagtg agctcacgtc caccatcaga aagtgtagtg aaaagctcca gcaatacccc
     1501 cgtctgcggg aggaaatgga acggattgtg accacccaca tccgagaacg tgagggccgc
     1561 accaaggagc aggtcatgct tctcatcgac attgagttgg cttacatgaa taccaaccat
     1621 gaagacttca taggctttgc caatgctcag cagagaagca accagatgaa caagaagaag
     1681 acttcaggga accaggatga gattctggtc attcgaaagg ggtggctgac catcaacaac
     1741 atcggcatca tgaagggagg ctccaaggag tactggtttg tgttgactgc tgagaatctg
     1801 tcctggtaca aggacgatga ggagaaagag aagaagtaca tgctgtctgt ggataatctg
     1861 aagctgcgtg atgtggagaa gggcttcatg tcaagcaagc atatttttgc cctcttcaac
     1921 actgagcaga ggaatgtcta caaggattac cggcagctgg aactggcctg tgagacacag
     1981 gaggaggtgg acagttggaa ggcttccttt ctgagggctg gcgtgtaccc tgagcgtgtt
     2041 ggggacaagg agaaagccag tgagactgag gagaacggct ctgacagctt catgcactcc
     2101 atggaccctc agctggagcg ccaggtggag accatccgga acctggtaga ctcgtacatg
     2161 gccattgtca acaagactgt acgggatctc atgcccaaga ccatcatgca cctcatgatc
     2221 aacaatacca aggagtttat cttctctgag ctgctggcca acctgtactc ttgcggggac
     2281 cagaacacgc tgatggaaga atcggccgaa caggctcagc ggcgcgacga gatgctgcgt
     2341 atgtaccacg cactgaagga ggcgctcagc attatcggcg acatcaacac gaccaccgtc
     2401 agcacgccca tgcccccgcc cgtggacgac tcctggctgc aggtgcagag cgtaccggcc
     2461 ggacgcaggt cgcccacgtc cagccccacg ccgcagcgcc gagcccccgc cgtgccccca
     2521 gcccggcccg ggtcgcgggg ccctgctcct gggcctccgc ctgctggatc cgccctgggg
     2581 ggggctcccc ccgtgccctc caggccgggg gcttcccctg acccctttgg cccccctccc
     2641 caggtgccct cgcgccccaa ccgcgccccg cctggggtcc ccagaatcac tatcagtgac
     2701 ccctgaggag tgtcagctac gcaggaaggg cccagcctca cctacgagac ctgcagcccc
     2761 ccgaccatcg gaggctcccc tcttagactt ataagtctgt ggctacaggc atcggctgcc
     2821 tgcctcctag
//
