LOCUS       XM_039104141            3863 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dynamin 1 (Dnm1), transcript variant
            X2, mRNA.
ACCESSION   XM_039104141
VERSION     XM_039104141.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104141.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3863
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3863
                     /gene="Dnm1"
                     /gene_synonym="Dnm"
                     /note="dynamin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 30 ESTs, 1 long SRA read,
                     6 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 137 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:140694"
                     /db_xref="RGD:71096"
     CDS             154..2760
                     /gene="Dnm1"
                     /gene_synonym="Dnm"
                     /codon_start=1
                     /product="dynamin-1 isoform X2"
                     /protein_id="XP_038960069.1"
                     /db_xref="GeneID:140694"
                     /db_xref="RGD:71096"
                     /translation="MGNRGMEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGK
                     SSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIE
                     AETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML
                     MQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARD
                     VLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPY
                     LQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQ
                     QFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAI
                     KNIHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMVISELISTVRQCTKKLQQYP
                     RLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQQRSNQMNK
                     KKTSGNQDEILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLS
                     VDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAG
                     VYPERVGDKEKASETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMP
                     KTIMHLMINNTKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALS
                     IIGDINTTTVSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGP
                     APGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPSRKGPASPTRPA
                     APRPSEAPLLDL"
ORIGIN      
        1 gcggcctgga gaagcgctcc gctcggatcc ccgagaggcg gaggacccgc ggtgcacgca
       61 gtcgggatat tccgctgcag ccgcgaagcc gggggccaag agccggagca ggagcggctg
      121 ccgggatcgc agcccgccgg gcccgccgca accatgggca accgcggcat ggaagacctc
      181 atcccgctgg ttaaccggtt acaggacgcc ttctctgcca tcggccagaa cgcggacctc
      241 gacttgccgc agatcgccgt ggtaggcggc cagagcgccg gcaagagctc ggtgctggag
      301 aatttcgtgg gcagggactt cttgccccga ggatccggca tcgtcacccg gcgtcccctg
      361 gtcctgcagc tggttaattc taccacagaa tatgccgagt tcctgcactg caaggggaag
      421 aaattcaccg acttcgagga ggtgcgcctg gagatcgagg ctgagaccga ccgagtcact
      481 ggcaccaaca agggcatttc gcctgtgccc atcaacctgc gtgtctactc accccatgtg
      541 ctcaacctga ctctagtgga cctgccagga atgaccaagg tcccagttgg ggaccaacct
      601 cctgacatcg agttccagat ccgggacatg cttatgcagt ttgtcactaa ggagaactgc
      661 cttatcctgg ctgtgtcccc tgccaactcg gacctggcca actctgatgc cctcaagatc
      721 gccaaggagg tggaccccca gggtcagcgc accattgggg tcatcaccaa gttggacctg
      781 atggacgagg gcacagatgc tcgggatgtg ctggagaaca agctgctccc attgcgcaga
      841 ggctacattg gcgtggtgaa ccggagccag aaggacatag atggcaagaa ggatatcaca
      901 gccgccttgg ctgccgagcg caaattcttc ctctcccacc catcctaccg ccacttggct
      961 gaccgcatgg gcacacccta cctgcagaag gtcctcaacc agcaactgac caaccacatc
     1021 cgggacacgc tgccgggact tcggaacaaa ctgcagagcc agctgctgtc cattgagaag
     1081 gaggtggacg agtacaagaa cttccgaccg gatgacccag cgcgcaagac caaggccctg
     1141 ctgcagatgg tccagcagtt tgcagtggac ttcgagaagc gcattgaggg ttctggagac
     1201 cagatcgaca cttatgaact gtcaggtgga gcccgcatta accggatctt ccacgaacgc
     1261 ttcccttttg agctggttaa gatggagttt gatgagaagg aactgcgaag ggagatcagc
     1321 tacgctatca agaacattca tggcatcaga acggggctgt ttaccccaga catggccttt
     1381 gaaaccattg tgaaaaagca ggtgaagaag attcgagagc cgtgtctcaa gtgtgtggac
     1441 atggttatct cggagctaat cagcaccgtt agacagtgca ccaagaagct ccagcaatac
     1501 ccccgtctgc gggaggaaat ggaacggatt gtgaccaccc acatccgaga acgtgagggc
     1561 cgcaccaagg agcaggtcat gcttctcatc gacattgagt tggcttacat gaataccaac
     1621 catgaagact tcataggctt tgccaatgct cagcagagaa gcaaccagat gaacaagaag
     1681 aagacttcag ggaaccagga tgagattctg gtcattcgaa aggggtggct gaccatcaac
     1741 aacatcggca tcatgaaggg aggctccaag gagtactggt ttgtgttgac tgctgagaat
     1801 ctgtcctggt acaaggacga tgaggagaaa gagaagaagt acatgctgtc tgtggataat
     1861 ctgaagctgc gtgatgtgga gaagggcttc atgtcaagca agcatatttt tgccctcttc
     1921 aacactgagc agaggaatgt ctacaaggat taccggcagc tggaactggc ctgtgagaca
     1981 caggaggagg tggacagttg gaaggcttcc tttctgaggg ctggcgtgta ccctgagcgt
     2041 gttggggaca aggagaaagc cagtgagact gaggagaacg gctctgacag cttcatgcac
     2101 tccatggacc ctcagctgga gcgccaggtg gagaccatcc ggaacctggt agactcgtac
     2161 atggccattg tcaacaagac tgtacgggat ctcatgccca agaccatcat gcacctcatg
     2221 atcaacaata ccaaggagtt tatcttctct gagctgctgg ccaacctgta ctcttgcggg
     2281 gaccagaaca cgctgatgga agaatcggcc gaacaggctc agcggcgcga cgagatgctg
     2341 cgtatgtacc acgcactgaa ggaggcgctc agcattatcg gcgacatcaa cacgaccacc
     2401 gtcagcacgc ccatgccccc gcccgtggac gactcctggc tgcaggtgca gagcgtaccg
     2461 gccggacgca ggtcgcccac gtccagcccc acgccgcagc gccgagcccc cgccgtgccc
     2521 ccagcccggc ccgggtcgcg gggccctgct cctgggcctc cgcctgctgg atccgccctg
     2581 gggggggctc cccccgtgcc ctccaggccg ggggcttccc ctgacccctt tggcccccct
     2641 ccccaggtgc cctcgcgccc caaccgcgcc ccgcctgggg tccccagcag gaagggccca
     2701 gcctcaccta cgagacctgc agccccccga ccatcggagg ctcccctctt agacttataa
     2761 gtctgtggct acaggcatcg gctgcctgcc tcctagcctc cccagggtcc cctcagagga
     2821 ctcctgggct ttctgaccac ctgaggggcc tccagcgctc cctccagcca tcccctttag
     2881 cttcgatctc ctggttcaaa cactactggc ctcatggctg ttacatggga ctccctgagg
     2941 cttggggtgg ccctgagcca gtgagatggg aaacagagtg agcagaaaag agggaggccc
     3001 tgtggtgcat tgcctgggtg gtgtgtgaga ggccgtgtgt gtggcaagag agggccaccc
     3061 agcctctccc cagactaccc tctagttacc gcccagcacc tcccatcttc cattcatcaa
     3121 ctgcccgtct cttccgggaa ccttgcccac atccacacct gcctcatccc ctctgcctct
     3181 gctgaaggtg gctactcttg ccttaccagc tctccttcct tttctttctt cggttctctc
     3241 ttggctttct ctccaactgc cagccgatcg ggtcaggcaa gtccgtcccg tcctgagagc
     3301 cccaggcccc ccttcgacct ctaaccagat ccctcctact cctcggagac ctcccttatc
     3361 aagcctgcct ggacagctgt tctgtgactt gacagtggct cccccgaccc caaagcgtcc
     3421 tattcatcat ctgtgactta gtctgttgta gtggtgagct gatacatcca aatgtgatgt
     3481 tggtgaaaac ttgtgcccct ctgtggtatt gctcctgcga cattctataa atatctataa
     3541 atatacctat atatacatat atatacatat atatggctga cacagcctcg cctgtagtgt
     3601 cagaatcaac caccatgctg tccttgtgga gtcctgtggt ccaactacaa gggaacgctg
     3661 tcatcctgac atcccccctc caatgtgcca cctccagtga gcctccctgt cccttggcct
     3721 gtggacagcc atccccttgg ccatccccac cctgcacaag gggatgctgc accagcagct
     3781 gtgcggttct ctgatggcca ccagtcttgc tgtctcttgg ctgagaataa aacccatttc
     3841 tggacaatgg ggaactgcgt gta
//
