LOCUS       NM_001130990             756 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DNL-type zinc finger (Dnlz), transcript variant
            1, mRNA.
ACCESSION   NM_001130990 XM_001078337 XM_216011
VERSION     NM_001130990.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Mar 8, 2022 this sequence version replaced NM_001130990.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ205125.1, BQ204487.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840115,
                                           SAMN16676785 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-339               JAXUCZ010000003.1  29569482-29569820   c
            340-479             JAXUCZ010000003.1  29569113-29569252   c
            480-756             JAXUCZ010000003.1  29568041-29568317   c
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..756
                     /gene="Dnlz"
                     /gene_synonym="RGD1308635"
                     /note="DNL-type zinc finger"
                     /db_xref="GeneID:296587"
                     /db_xref="RGD:1308635"
     exon            1..339
                     /gene="Dnlz"
                     /gene_synonym="RGD1308635"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..633
                     /gene="Dnlz"
                     /gene_synonym="RGD1308635"
                     /codon_start=1
                     /product="DNL-type zinc finger protein"
                     /protein_id="NP_001124462.1"
                     /db_xref="GeneID:296587"
                     /db_xref="RGD:1308635"
                     /translation="MLRTALSRMPTLLRSVRTRDSGPRQLWDLGARLKTAKRLRGWAW
                     GWRSSSSAPGSEHAAALGRVKADHYQLVYTCKVCGTRSSKHISKLAYHQGVVIVTCPG
                     CQNHHIIADNLSWFSDLKGKRNIEEILAARGEEVRRVCGDGALELILEVAEPPATPEG
                     GEDPTHPGKMDQS"
     exon            340..479
                     /gene="Dnlz"
                     /gene_synonym="RGD1308635"
                     /inference="alignment:Splign:2.1.0"
     exon            480..756
                     /gene="Dnlz"
                     /gene_synonym="RGD1308635"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttccggcc gctgcgccca tttccaaaat ggcggataca gcttcagttg tacggggcgg
       61 tgcaaaaaga ggtggccaag aatcgtcgtg gtgacggtgc cctggaacgg catgttgcgg
      121 acagcgctga gccgcatgcc gacactactt cgtagtgtga ggacccggga ttccggaccg
      181 cggcagcttt gggatttggg ggctcgccta aaaaccgcga agagacttcg gggctgggcc
      241 tggggctggc ggagctcgag ctccgcgccg ggatcagagc atgcggcggc gctagggcgc
      301 gtgaaagcgg accactacca gctcgtctac acctgcaagg tctgtgggac tcggtcatcc
      361 aagcacatct caaagttggc ctatcaccag ggtgtggtca tcgtgacttg ccctggttgc
      421 cagaaccacc acatcatcgc agacaaccta agctggttct ctgacctgaa ggggaagagg
      481 aacattgaag agatcctagc agccagagga gaggaggtac gccgggtgtg cggtgacggt
      541 gccttggaac tgattctgga ggtggctgaa ccacctgcca ccccagaagg gggtgaagat
      601 cccactcacc ccggcaagat ggaccagagc tgaccccgta cactcttgca actgtggact
      661 cctccaactt cagactccag tcttcccaaa agtctccccc ttcacttgga gcctctccag
      721 cctgctgttc tctgtcagta aacaactgtc aatcca
//
